More than 300 homologs were found in PanDaTox collection
for query gene M446_3856 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_3856  binding-protein-dependent transport systems inner membrane component  100 
 
 
270 aa  521  1e-147  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_4689  binding-protein-dependent transport systems inner membrane component  51.15 
 
 
276 aa  265  5.999999999999999e-70  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.363302  normal 
 
 
-
 
NC_007952  Bxe_B2542  ABC spermidine/putrescine transporter, inner membrane subunit  56.75 
 
 
283 aa  261  6e-69  Burkholderia xenovorans LB400  Bacteria  normal  0.40939  normal  0.246449 
 
 
-
 
NC_008254  Meso_2370  binding-protein-dependent transport systems inner membrane component  49.59 
 
 
274 aa  250  1e-65  Chelativorans sp. BNC1  Bacteria  normal  0.560014  n/a   
 
 
-
 
NC_002947  PP_3816  binding-protein-dependent transport systems inner membrane component  41.39 
 
 
269 aa  187  2e-46  Pseudomonas putida KT2440  Bacteria  decreased coverage  0.0037178  normal  0.4746 
 
 
-
 
NC_009512  Pput_1953  binding-protein-dependent transport systems inner membrane component  41.32 
 
 
268 aa  185  7e-46  Pseudomonas putida F1  Bacteria  normal  0.911704  normal 
 
 
-
 
NC_010322  PputGB1_2089  binding-protein-dependent transport systems inner membrane component  41.32 
 
 
268 aa  184  1.0000000000000001e-45  Pseudomonas putida GB-1  Bacteria  normal  0.217099  normal 
 
 
-
 
NC_010501  PputW619_1933  binding-protein-dependent transport systems inner membrane component  40.16 
 
 
269 aa  183  3e-45  Pseudomonas putida W619  Bacteria  normal  normal  0.0161656 
 
 
-
 
NC_007492  Pfl01_3243  binding-protein dependent transport system inner membrane protein  40.79 
 
 
269 aa  178  7e-44  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.796458 
 
 
-
 
NC_009439  Pmen_3449  binding-protein-dependent transport systems inner membrane component  38.93 
 
 
269 aa  177  2e-43  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.413551 
 
 
-
 
NC_007643  Rru_A2045  binding-protein dependent transport system inner membrane protein  42.8 
 
 
275 aa  175  7e-43  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.586316  n/a   
 
 
-
 
NC_004578  PSPTO_2665  spermidine/putrescine ABC transporter, permease protein, putative  40.17 
 
 
271 aa  174  9.999999999999999e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0357719  n/a   
 
 
-
 
NC_007005  Psyr_2399  binding-protein dependent transport system inner membrane protein  40 
 
 
271 aa  174  1.9999999999999998e-42  Pseudomonas syringae pv. syringae B728a  Bacteria  decreased coverage  0.00651767  normal  0.388943 
 
 
-
 
NC_009654  Mmwyl1_2486  binding-protein-dependent transport systems inner membrane component  39.84 
 
 
268 aa  173  1.9999999999999998e-42  Marinomonas sp. MWYL1  Bacteria  normal  0.0758947  normal 
 
 
-
 
NC_013510  Tcur_0448  binding-protein-dependent transport systems inner membrane component  42.92 
 
 
275 aa  168  7e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3109  spermidine/putrescine ABC transporter permease  40.08 
 
 
282 aa  166  4e-40  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1221  spermidine/putrescine ABC transporter, permease protein  40.08 
 
 
282 aa  166  4e-40  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1338  binding-protein-dependent transport systems inner membrane component  40.08 
 
 
282 aa  166  4e-40  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012854  Rleg_6542  binding-protein-dependent transport systems inner membrane component  40.64 
 
 
266 aa  166  5.9999999999999996e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.208097 
 
 
-
 
NC_009439  Pmen_4203  binding-protein-dependent transport systems inner membrane component  39.09 
 
 
284 aa  164  1.0000000000000001e-39  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_2209  putrescine ABC transporter permease  40.34 
 
 
264 aa  163  2.0000000000000002e-39  Burkholderia pseudomallei 1710b  Bacteria  normal  0.052298  n/a   
 
 
-
 
NC_013421  Pecwa_2541  binding-protein-dependent transport systems inner membrane component  38.96 
 
 
272 aa  162  5.0000000000000005e-39  Pectobacterium wasabiae WPP163  Bacteria  normal  0.180027  n/a   
 
 
-
 
NC_008254  Meso_1862  binding-protein-dependent transport systems inner membrane component  38.96 
 
 
272 aa  162  6e-39  Chelativorans sp. BNC1  Bacteria  normal  0.148364  n/a   
 
 
-
 
NC_012917  PC1_2228  binding-protein-dependent transport systems inner membrane component  38.96 
 
 
272 aa  162  7e-39  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5591  binding-protein-dependent transport systems inner membrane component  40.47 
 
 
266 aa  162  8.000000000000001e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_3736  binding-protein-dependent transport systems inner membrane component  38.16 
 
 
276 aa  160  2e-38  Sinorhizobium medicae WSM419  Bacteria  normal  0.282406  normal 
 
 
-
 
NC_004311  BRA1105  polyamine ABC transporter, permease protein  38.33 
 
 
267 aa  160  3e-38  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4000  binding-protein-dependent transport systems inner membrane component  40.79 
 
 
275 aa  160  3e-38  Pseudomonas mendocina ymp  Bacteria  normal  0.360042  normal 
 
 
-
 
NC_011988  Avi_6091  ABC transporter membrane spanning protein (polyamine)  38.77 
 
 
266 aa  159  4e-38  Agrobacterium vitis S4  Bacteria  normal  0.417915  n/a   
 
 
-
 
NC_010676  Bphyt_6153  binding-protein-dependent transport systems inner membrane component  38.43 
 
 
264 aa  159  4e-38  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1871  binding-protein-dependent transport systems inner membrane component  39.59 
 
 
278 aa  158  1e-37  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6578  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
265 aa  156  4e-37  Burkholderia phymatum STM815  Bacteria  normal  0.496226  normal  0.414836 
 
 
-
 
NC_007958  RPD_1033  binding-protein-dependent transport systems inner membrane component  40.37 
 
 
550 aa  155  8e-37  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.957073  normal 
 
 
-
 
NC_007952  Bxe_B1507  ABC spermidine/putrescine transporter, inner membrane subunit  37.99 
 
 
264 aa  153  2e-36  Burkholderia xenovorans LB400  Bacteria  normal  0.375803  normal  0.0420414 
 
 
-
 
NC_010622  Bphy_2380  binding-protein-dependent transport systems inner membrane component  38.77 
 
 
279 aa  152  5e-36  Burkholderia phymatum STM815  Bacteria  normal  0.576146  normal 
 
 
-
 
NC_010087  Bmul_6113  binding-protein-dependent transport systems inner membrane component  42.92 
 
 
266 aa  152  7e-36  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.575148  normal 
 
 
-
 
NC_011368  Rleg2_4995  binding-protein-dependent transport systems inner membrane component  40.18 
 
 
265 aa  151  1e-35  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.887799  normal 
 
 
-
 
NC_008391  Bamb_4294  binding-protein-dependent transport systems inner membrane component  35.63 
 
 
279 aa  150  2e-35  Burkholderia ambifaria AMMD  Bacteria  normal  0.144254  normal 
 
 
-
 
NC_009050  Rsph17029_3039  binding-protein-dependent transport systems inner membrane component  38.66 
 
 
264 aa  150  3e-35  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.645477  normal 
 
 
-
 
NC_007494  RSP_3393  ABC opine/polyamine transporter, inner membrane subunit  38.66 
 
 
264 aa  150  3e-35  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.381224  n/a   
 
 
-
 
NC_009621  Smed_6247  binding-protein-dependent transport systems inner membrane component  37.67 
 
 
266 aa  149  3e-35  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.487966 
 
 
-
 
NC_011662  Tmz1t_0427  binding-protein-dependent transport systems inner membrane component  40.98 
 
 
274 aa  148  8e-35  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2990  binding-protein-dependent transport systems inner membrane component  36.8 
 
 
391 aa  148  8e-35  Ruegeria sp. TM1040  Bacteria  normal  0.0689786  normal  0.478679 
 
 
-
 
NC_007948  Bpro_4359  binding-protein-dependent transport systems inner membrane component  39.91 
 
 
591 aa  148  1.0000000000000001e-34  Polaromonas sp. JS666  Bacteria  normal  0.184868  normal  0.311507 
 
 
-
 
NC_002947  PP_0414  binding-protein-dependent transport systems inner membrane component  40.19 
 
 
275 aa  147  2.0000000000000003e-34  Pseudomonas putida KT2440  Bacteria  normal  0.958357  normal 
 
 
-
 
NC_011989  Avi_2708  ABC transporter membrane spanning protein (polyamine)  36.86 
 
 
264 aa  147  2.0000000000000003e-34  Agrobacterium vitis S4  Bacteria  normal  0.319241  n/a   
 
 
-
 
NC_009512  Pput_0448  binding-protein-dependent transport systems inner membrane component  40.19 
 
 
275 aa  147  2.0000000000000003e-34  Pseudomonas putida F1  Bacteria  normal  normal  0.439073 
 
 
-
 
NC_010322  PputGB1_0445  binding-protein-dependent transport systems inner membrane component  40.19 
 
 
275 aa  147  2.0000000000000003e-34  Pseudomonas putida GB-1  Bacteria  normal  normal  0.355956 
 
 
-
 
NC_007492  Pfl01_5122  binding-protein dependent transport system inner membrane protein  39.25 
 
 
274 aa  146  3e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.026759  normal  0.638371 
 
 
-
 
NC_008688  Pden_4602  binding-protein-dependent transport systems inner membrane component  41.63 
 
 
591 aa  145  6e-34  Paracoccus denitrificans PD1222  Bacteria  normal  0.621124  normal 
 
 
-
 
NC_013739  Cwoe_0569  binding-protein-dependent transport systems inner membrane component  39.53 
 
 
268 aa  145  7.0000000000000006e-34  Conexibacter woesei DSM 14684  Bacteria  normal  0.0474626  normal 
 
 
-
 
NC_009720  Xaut_0865  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
264 aa  144  1e-33  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2367  binding-protein-dependent transport systems inner membrane component  37.33 
 
 
597 aa  144  1e-33  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3649  binding-protein-dependent transport systems inner membrane component  42.45 
 
 
262 aa  144  2e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_4153  binding-protein-dependent transport systems inner membrane component  38.12 
 
 
263 aa  144  2e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.829399  n/a   
 
 
-
 
NC_010681  Bphyt_2374  binding-protein-dependent transport systems inner membrane component  36.29 
 
 
270 aa  143  2e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008688  Pden_4875  binding-protein-dependent transport systems inner membrane component  35.16 
 
 
587 aa  143  3e-33  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.432532 
 
 
-
 
NC_014165  Tbis_1588  binding-protein-dependent transporter inner membrane component  40.37 
 
 
279 aa  142  5e-33  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.148375 
 
 
-
 
NC_009656  PSPA7_0750  ABC transporter permease  39.42 
 
 
276 aa  140  9.999999999999999e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_07900  putative permease of ABC transporter  38.14 
 
 
276 aa  139  3.9999999999999997e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00280578 
 
 
-
 
NC_013922  Nmag_0084  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
272 aa  139  4.999999999999999e-32  Natrialba magadii ATCC 43099  Archaea  normal  0.0395984  n/a   
 
 
-
 
NC_009621  Smed_5471  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
588 aa  139  4.999999999999999e-32  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011982  Avi_8304  ABC transporter  34.6 
 
 
265 aa  137  2e-31  Agrobacterium vitis S4  Bacteria  normal  0.0178234  n/a   
 
 
-
 
NC_011004  Rpal_5130  binding-protein-dependent transport systems inner membrane component  37.27 
 
 
596 aa  137  2e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2522  ABC transporter, permease protein  35.37 
 
 
264 aa  136  4e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2333  binding-protein dependent transport system inner membrane protein  35.37 
 
 
264 aa  135  6.0000000000000005e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.161709  normal  0.782854 
 
 
-
 
NC_010501  PputW619_4788  binding-protein-dependent transport systems inner membrane component  37.12 
 
 
275 aa  135  6.0000000000000005e-31  Pseudomonas putida W619  Bacteria  normal  normal  0.776443 
 
 
-
 
NC_013922  Nmag_1787  binding-protein-dependent transport systems inner membrane component  34.44 
 
 
669 aa  135  7.000000000000001e-31  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C6717  ABC spermidine/putrescine transporter, inner membrane subunit  33.83 
 
 
280 aa  135  7.000000000000001e-31  Burkholderia sp. 383  Bacteria  decreased coverage  0.00799546  normal 
 
 
-
 
NC_010625  Bphy_6628  binding-protein-dependent transport systems inner membrane component  37.44 
 
 
264 aa  135  8e-31  Burkholderia phymatum STM815  Bacteria  normal  0.381273  normal 
 
 
-
 
NC_012880  Dd703_1788  binding-protein-dependent transport systems inner membrane component  39.9 
 
 
275 aa  134  9.999999999999999e-31  Dickeya dadantii Ech703  Bacteria  normal  0.0709875  n/a   
 
 
-
 
NC_011894  Mnod_4262  binding-protein-dependent transport systems inner membrane component  35.44 
 
 
593 aa  134  9.999999999999999e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3472  ABC spermidine/putrescine transporter, innermembrane subunit  35.89 
 
 
275 aa  134  9.999999999999999e-31  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.84629 
 
 
-
 
NC_010676  Bphyt_4429  binding-protein-dependent transport systems inner membrane component  37.17 
 
 
264 aa  134  9.999999999999999e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  0.186422  normal  0.676109 
 
 
-
 
NC_009668  Oant_4437  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
264 aa  134  9.999999999999999e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0203  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
265 aa  134  9.999999999999999e-31  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.973641  normal  0.52762 
 
 
-
 
NC_008687  Pden_3462  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
317 aa  133  1.9999999999999998e-30  Paracoccus denitrificans PD1222  Bacteria  normal  0.397103  normal 
 
 
-
 
NC_010511  M446_3864  binding-protein-dependent transport systems inner membrane component  37.1 
 
 
261 aa  134  1.9999999999999998e-30  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_2149  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
317 aa  133  1.9999999999999998e-30  Paracoccus denitrificans PD1222  Bacteria  normal  0.964128  normal 
 
 
-
 
NC_007948  Bpro_3945  binding-protein-dependent transport systems inner membrane component  35.86 
 
 
264 aa  133  3e-30  Polaromonas sp. JS666  Bacteria  normal  0.334886  normal  0.870267 
 
 
-
 
NC_007952  Bxe_B0748  polyamine/opine/phosphonate ABC transporter inner membrane protein  36.73 
 
 
264 aa  133  3e-30  Burkholderia xenovorans LB400  Bacteria  normal  0.467059  normal 
 
 
-
 
NC_010625  Bphy_7062  binding-protein-dependent transport systems inner membrane component  36.2 
 
 
593 aa  133  3e-30  Burkholderia phymatum STM815  Bacteria  normal  normal  0.156031 
 
 
-
 
NC_009485  BBta_1834  ABC transporter, permease protein  35.53 
 
 
269 aa  133  3.9999999999999996e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.632575 
 
 
-
 
NC_010676  Bphyt_6885  binding-protein-dependent transport systems inner membrane component  38.55 
 
 
279 aa  132  5e-30  Burkholderia phytofirmans PsJN  Bacteria  normal  0.471707  normal  0.190136 
 
 
-
 
NC_007908  Rfer_0887  binding-protein-dependent transport systems inner membrane component  36.32 
 
 
263 aa  132  5e-30  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1886  ABC polyamine/opine transporter, inner membrane subunit  34.38 
 
 
302 aa  132  6.999999999999999e-30  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0261044  n/a   
 
 
-
 
NC_010322  PputGB1_3207  binding-protein-dependent transport systems inner membrane component  38.4 
 
 
264 aa  132  6.999999999999999e-30  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_0533  binding-protein-dependent transport systems inner membrane component  34.38 
 
 
302 aa  132  6.999999999999999e-30  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011370  Rleg2_6319  binding-protein-dependent transport systems inner membrane component  32.04 
 
 
311 aa  132  7.999999999999999e-30  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0306  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
264 aa  131  1.0000000000000001e-29  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4699  binding-protein-dependent transport systems inner membrane component  37.77 
 
 
272 aa  131  1.0000000000000001e-29  Variovorax paradoxus S110  Bacteria  normal  0.607966  n/a   
 
 
-
 
NC_010627  Bphy_7801  binding-protein-dependent transport systems inner membrane component  34.66 
 
 
284 aa  130  2.0000000000000002e-29  Burkholderia phymatum STM815  Bacteria  normal  0.109099  normal 
 
 
-
 
NC_008061  Bcen_4730  binding-protein-dependent transport systems inner membrane component  37 
 
 
264 aa  130  2.0000000000000002e-29  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.293753  n/a   
 
 
-
 
NC_008543  Bcen2424_3633  binding-protein-dependent transport systems inner membrane component  37 
 
 
264 aa  130  2.0000000000000002e-29  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.332864 
 
 
-
 
NC_007952  Bxe_B2930  spermidine/putrescine ABC transporter inner membrane protein  38.15 
 
 
279 aa  130  3e-29  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6036  binding-protein-dependent transport systems inner membrane component  37.39 
 
 
280 aa  130  3e-29  Burkholderia phymatum STM815  Bacteria  normal  0.475506  normal  0.0258331 
 
 
-
 
NC_008391  Bamb_5374  binding-protein-dependent transport systems inner membrane component  37 
 
 
264 aa  130  3e-29  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.628457 
 
 
-
 
NC_010086  Bmul_5060  binding-protein-dependent transport systems inner membrane component  37 
 
 
264 aa  129  4.0000000000000003e-29  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.183233 
 
 
-
 
NC_010552  BamMC406_3539  binding-protein-dependent transport systems inner membrane component  37 
 
 
264 aa  129  4.0000000000000003e-29  Burkholderia ambifaria MC40-6  Bacteria  normal  0.447694  normal 
 
 
-
 
NC_008786  Veis_0756  binding-protein-dependent transport systems inner membrane component  36.73 
 
 
264 aa  127  1.0000000000000001e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.533361  normal 
 
 
-
 
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