Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B2542 |
Symbol | |
ID | 4006962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 576084 |
End bp | 576935 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637950170 |
Product | ABC spermidine/putrescine transporter, inner membrane subunit |
Protein accession | YP_552800 |
Protein GI | 91777592 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.40939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.246449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACA CTGCGGCCCA CGTGGGCAAA GACTTGGTCC AGCCCGAACC GAAGCGCCGC GACCGGCGCG CGGCGCTGCG CGTGCTGGGT TCGGTCGGCG GCTGGTGCGG CTATCTGTTC CTGCTGCTGC CGAGCCTCGT GATCGTGCCC ATCTCGTTTG GCGGCGGCAG CGAACTGACC TTCCCGCCGC GGACCTTCTC GTTCTCGTTA TTCCAGCAGT TTTTTGCGGA TCCGGCGTGG TGGGGCGCGT GCATGACGAG CGTGATGGTG GCGCTGCTCG CTTCGGCGAT CGCGATCGCC GTGGGCGTGC CCGGCGCCTA TGCATTGGCG CGCGGACACT TTCCGGGCAA GCGGGTGCTC GAAACCCTGG CGATCACGCC GATGCTCGTG CCGGTGGTCG TGCTCGGGCT CGGCATCTAC AAGCAGTTCT CGGCGCTCGC GCTCGTCAAC ACGATAGGCG GACTCGCGCT GGCGCATGCG GTACTGGTCG TGCCGTTCGT GATCATCGCG GTGGGCTCGG GGCTGCGTCA CGCGGACGCG TCGCTCGAAG CCGTAGCGCT CGTCATGGGT GCGAGCCGCA CGCGCATCTT CTTTCAGGTG GTGCTGCCGC AGATCCGCGC TTCGGTGGCG GTGAGCGTGC TGTTCGCTTT CCTGCTCTCG TTCGACGAAG TGGTGGTCGC GTACTTCATC TCGGGGCCAC AGACCACGAC GCTGCCGGTC AAGATGTACA GCGCGATTCG CTGGGAAGTG TCGCCGGTGC TCGCTGCGGT CTCGACGCTC CTCACGCTGA TCTCGCTGCT GGTATGCCTC GGCATCATGA CCTTGCAGCG GCGTGATTCC GACACCGAAT AA
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Protein sequence | MMNTAAHVGK DLVQPEPKRR DRRAALRVLG SVGGWCGYLF LLLPSLVIVP ISFGGGSELT FPPRTFSFSL FQQFFADPAW WGACMTSVMV ALLASAIAIA VGVPGAYALA RGHFPGKRVL ETLAITPMLV PVVVLGLGIY KQFSALALVN TIGGLALAHA VLVVPFVIIA VGSGLRHADA SLEAVALVMG ASRTRIFFQV VLPQIRASVA VSVLFAFLLS FDEVVVAYFI SGPQTTTLPV KMYSAIRWEV SPVLAAVSTL LTLISLLVCL GIMTLQRRDS DTE
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