More than 300 homologs were found in PanDaTox collection
for query gene Gbro_3238 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_3238  regulatory protein LuxR  100 
 
 
228 aa  452  1.0000000000000001e-126  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  71.49 
 
 
218 aa  305  4.0000000000000004e-82  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  65.79 
 
 
221 aa  262  3e-69  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  62.28 
 
 
224 aa  260  1e-68  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  58.52 
 
 
221 aa  250  1e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  60.35 
 
 
225 aa  247  8e-65  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  60.79 
 
 
218 aa  242  3.9999999999999997e-63  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  61.43 
 
 
225 aa  241  5e-63  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  61.95 
 
 
215 aa  238  5.999999999999999e-62  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  56.96 
 
 
226 aa  237  1e-61  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  55.22 
 
 
226 aa  236  2e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  58.77 
 
 
217 aa  234  9e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  56.6 
 
 
229 aa  233  2.0000000000000002e-60  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  55.22 
 
 
227 aa  230  1e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  55.75 
 
 
215 aa  230  2e-59  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  53.95 
 
 
218 aa  227  1e-58  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  53.1 
 
 
234 aa  226  3e-58  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.19 
 
 
225 aa  223  2e-57  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  51.11 
 
 
225 aa  223  3e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  52.89 
 
 
222 aa  222  3e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  53.3 
 
 
220 aa  222  4e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  54.47 
 
 
234 aa  221  7e-57  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  50.64 
 
 
228 aa  220  9.999999999999999e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  58.22 
 
 
302 aa  220  9.999999999999999e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  52 
 
 
221 aa  219  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  51.32 
 
 
231 aa  219  1.9999999999999999e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  54.67 
 
 
221 aa  219  3e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  53.33 
 
 
215 aa  218  6e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  52.38 
 
 
226 aa  218  7e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  53.51 
 
 
225 aa  217  8.999999999999998e-56  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  52.52 
 
 
231 aa  217  1e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  53.95 
 
 
230 aa  216  2e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  50.44 
 
 
219 aa  216  2e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  48.46 
 
 
220 aa  216  2e-55  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  49.56 
 
 
219 aa  216  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  54.22 
 
 
221 aa  215  4e-55  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  52.21 
 
 
239 aa  215  4e-55  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  53.04 
 
 
225 aa  215  5e-55  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  50.86 
 
 
224 aa  215  5.9999999999999996e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  48.67 
 
 
219 aa  214  7e-55  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  53.68 
 
 
227 aa  214  8e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  51.97 
 
 
239 aa  214  9e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  54.19 
 
 
225 aa  214  9.999999999999999e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  53.33 
 
 
224 aa  213  1.9999999999999998e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  51.1 
 
 
217 aa  212  2.9999999999999995e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  53.07 
 
 
230 aa  212  3.9999999999999995e-54  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  51.33 
 
 
221 aa  211  5.999999999999999e-54  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  53.51 
 
 
220 aa  211  5.999999999999999e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  49.56 
 
 
219 aa  211  5.999999999999999e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  50.88 
 
 
214 aa  210  1e-53  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  54.19 
 
 
222 aa  210  1e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  50.21 
 
 
223 aa  209  3e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  53.68 
 
 
232 aa  209  3e-53  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.77 
 
 
261 aa  208  6e-53  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  51.1 
 
 
228 aa  208  7e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  50.89 
 
 
213 aa  207  8e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  52.68 
 
 
247 aa  207  9e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  50.22 
 
 
221 aa  207  9e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  53.07 
 
 
227 aa  207  1e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  51.97 
 
 
224 aa  207  1e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  50.66 
 
 
218 aa  207  1e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  50 
 
 
230 aa  207  2e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  52.61 
 
 
230 aa  206  2e-52  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  50.66 
 
 
226 aa  207  2e-52  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.86 
 
 
229 aa  206  2e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  49.13 
 
 
233 aa  206  3e-52  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  48.2 
 
 
213 aa  205  4e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  54.31 
 
 
220 aa  205  5e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  50.66 
 
 
234 aa  204  6e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  50 
 
 
239 aa  204  7e-52  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  48.72 
 
 
223 aa  204  8e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  50 
 
 
228 aa  204  9e-52  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  48.9 
 
 
220 aa  204  9e-52  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  51.54 
 
 
220 aa  203  1e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  51.98 
 
 
234 aa  204  1e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  51.57 
 
 
211 aa  204  1e-51  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.72 
 
 
230 aa  203  1e-51  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  49.34 
 
 
214 aa  203  2e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  46.5 
 
 
248 aa  203  2e-51  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  47.83 
 
 
242 aa  203  2e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  49.15 
 
 
226 aa  202  3e-51  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.11 
 
 
222 aa  202  4e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  54.82 
 
 
224 aa  202  4e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  49.78 
 
 
211 aa  202  5e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  50.43 
 
 
224 aa  201  7e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  50.88 
 
 
216 aa  199  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  48.02 
 
 
214 aa  200  1.9999999999999998e-50  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  47.62 
 
 
241 aa  199  1.9999999999999998e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.48 
 
 
236 aa  199  3e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  49.57 
 
 
224 aa  199  3e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  50.43 
 
 
249 aa  199  3.9999999999999996e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  48.05 
 
 
230 aa  198  3.9999999999999996e-50  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  49.78 
 
 
215 aa  199  3.9999999999999996e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  49.14 
 
 
225 aa  198  7e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  49.57 
 
 
223 aa  198  7e-50  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  48.73 
 
 
226 aa  198  7e-50  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  50.44 
 
 
225 aa  197  9e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  49.36 
 
 
232 aa  197  1.0000000000000001e-49  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  45.42 
 
 
250 aa  197  1.0000000000000001e-49  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  48 
 
 
216 aa  197  1.0000000000000001e-49  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>