More than 300 homologs were found in PanDaTox collection
for query gene Dde_0692 on replicon NC_007519
Organism: Desulfovibrio desulfuricans subsp. desulfuricans str. G20



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007519  Dde_0692  response regulator receiver domain-containing protein  100 
 
 
145 aa  298  1e-80  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  48.48 
 
 
151 aa  122  2e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  42.86 
 
 
147 aa  117  4.9999999999999996e-26  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  40.3 
 
 
157 aa  108  2.0000000000000002e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  41.79 
 
 
144 aa  108  4.0000000000000004e-23  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  39.53 
 
 
141 aa  107  5e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  40.32 
 
 
143 aa  103  9e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  37.3 
 
 
147 aa  100  8e-21  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  41.98 
 
 
129 aa  99.8  1e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  41.13 
 
 
142 aa  97.4  6e-20  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  39.84 
 
 
374 aa  95.5  2e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  43.48 
 
 
121 aa  95.9  2e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  38.46 
 
 
135 aa  95.1  3e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  39.82 
 
 
120 aa  94  6e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  41.03 
 
 
139 aa  93.6  8e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  41.8 
 
 
128 aa  93.6  9e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  37.69 
 
 
131 aa  92.4  2e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  36.96 
 
 
141 aa  92  2e-18  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  40.35 
 
 
122 aa  90.9  5e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  36.29 
 
 
408 aa  90.9  6e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  39.67 
 
 
130 aa  90.1  8e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  41.07 
 
 
403 aa  90.1  9e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  35.25 
 
 
301 aa  88.6  3e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  35.61 
 
 
147 aa  87.8  5e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  37.3 
 
 
153 aa  87.4  6e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  38.1 
 
 
142 aa  86.7  1e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  38.52 
 
 
139 aa  86.3  1e-16  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  35.07 
 
 
382 aa  84  6e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  38.26 
 
 
129 aa  82  0.000000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  32.84 
 
 
151 aa  82  0.000000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  40.19 
 
 
119 aa  81.3  0.000000000000005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  33.59 
 
 
144 aa  80.9  0.000000000000006  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  28.08 
 
 
159 aa  79.7  0.00000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1364  two component, sigma54 specific, Fis family transcriptional regulator  38.94 
 
 
485 aa  79.3  0.00000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3765  two component, sigma54 specific, Fis family transcriptional regulator  34.35 
 
 
463 aa  79.7  0.00000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.000821276  normal 
 
 
-
 
NC_013223  Dret_2392  two component, sigma54 specific, transcriptional regulator, Fis family  37.29 
 
 
458 aa  79  0.00000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0321511  normal 
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  36.21 
 
 
126 aa  78.2  0.00000000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  33.09 
 
 
157 aa  77.8  0.00000000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  32.8 
 
 
135 aa  77.8  0.00000000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  34.21 
 
 
127 aa  77.8  0.00000000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  34.62 
 
 
142 aa  77  0.00000000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0065  histidine kinase  30.77 
 
 
578 aa  77  0.00000000000008  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0797  two component, sigma54 specific, transcriptional regulator, Fis family  31.16 
 
 
472 aa  77  0.00000000000008  Rhodothermus marinus DSM 4252  Bacteria  normal  0.241811  n/a   
 
 
-
 
NC_011901  Tgr7_3262  nitrogen metabolism transcriptional regulator, NtrC, Fis Family  34.01 
 
 
471 aa  77  0.00000000000008  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  33.64 
 
 
151 aa  76.6  0.00000000000009  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_008609  Ppro_1179  two component, sigma54 specific, Fis family transcriptional regulator  33.59 
 
 
457 aa  77  0.00000000000009  Pelobacter propionicus DSM 2379  Bacteria  normal  0.655382  n/a   
 
 
-
 
NC_007498  Pcar_1960  response regulator transcription factor  29.77 
 
 
471 aa  76.6  0.0000000000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0987  two component transcriptional regulator, winged helix family  35.25 
 
 
233 aa  76.3  0.0000000000001  Rhodothermus marinus DSM 4252  Bacteria  normal  0.195539  n/a   
 
 
-
 
NC_009767  Rcas_1114  response regulator receiver modulated serine phosphatase  38.89 
 
 
391 aa  76.3  0.0000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  33.61 
 
 
127 aa  75.9  0.0000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  34.96 
 
 
143 aa  75.9  0.0000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_012918  GM21_0057  histidine kinase  30.08 
 
 
588 aa  75.1  0.0000000000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000000000185994 
 
 
-
 
NC_008554  Sfum_0643  two component, sigma54 specific, Fis family transcriptional regulator  35.4 
 
 
478 aa  75.5  0.0000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  35.4 
 
 
129 aa  75.1  0.0000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  36.97 
 
 
151 aa  75.1  0.0000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009972  Haur_2366  two component, sigma54 specific, Fis family transcriptional regulator  34.55 
 
 
385 aa  75.1  0.0000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000342445  n/a   
 
 
-
 
NC_010814  Glov_2786  two component, sigma54 specific, transcriptional regulator, Fis family  31.43 
 
 
480 aa  74.7  0.0000000000004  Geobacter lovleyi SZ  Bacteria  normal  0.543097  n/a   
 
 
-
 
NC_009338  Mflv_2266  two component transcriptional regulator  38.18 
 
 
249 aa  74.7  0.0000000000004  Mycobacterium gilvum PYR-GCK  Bacteria  decreased coverage  0.00896474  normal 
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  34.15 
 
 
406 aa  74.3  0.0000000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_012560  Avin_45900  nitrogen regulation protein, sigma 54-dependent response regulator NtrC (NR(I))  34.45 
 
 
478 aa  74.3  0.0000000000005  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3079  two component, sigma54 specific, Fis family transcriptional regulator  32.35 
 
 
480 aa  74.3  0.0000000000006  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00177638  n/a   
 
 
-
 
NC_002939  GSU1117  response regulator  36.36 
 
 
127 aa  73.9  0.0000000000007  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2521  two component, sigma54 specific, transcriptional regulator, Fis family  29.77 
 
 
457 aa  73.9  0.0000000000007  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0812  two component, sigma54 specific, Fis family transcriptional regulator  29.77 
 
 
453 aa  73.9  0.0000000000007  Geobacter metallireducens GS-15  Bacteria  normal  0.0257022  hitchhiker  0.00000328811 
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  33.6 
 
 
413 aa  73.9  0.0000000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_007760  Adeh_0639  two component, sigma54 specific, Fis family transcriptional regulator  35.88 
 
 
455 aa  73.6  0.0000000000009  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1394  two component, sigma54 specific, Fis family transcriptional regulator  31.45 
 
 
450 aa  73.6  0.0000000000009  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.205793  normal  0.0550645 
 
 
-
 
NC_008554  Sfum_0633  response regulator receiver protein  32.26 
 
 
133 aa  73.6  0.0000000000009  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.546392  normal 
 
 
-
 
NC_004578  PSPTO_0352  nitrogen regulation protein NR(I)  34.19 
 
 
478 aa  72.8  0.000000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4822  helix-turn-helix, Fis-type:nitrogen regulation protein NR(I)  34.19 
 
 
478 aa  72.8  0.000000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0339  nitrogen metabolism transcriptional regulator, NtrC, Fis family  34.19 
 
 
478 aa  73.2  0.000000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0541  response regulator receiver sensor hybrid histidine kinase  41.51 
 
 
575 aa  73.2  0.000000000001  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2709  response regulator receiver sensor signal transduction histidine kinase  39.62 
 
 
501 aa  73.2  0.000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.710197  normal  0.745824 
 
 
-
 
NC_007517  Gmet_2679  response regulator receiver domain-containing protein  33.33 
 
 
129 aa  73.2  0.000000000001  Geobacter metallireducens GS-15  Bacteria  normal  0.380915  normal  0.27601 
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
465 aa  73.2  0.000000000001  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  34.17 
 
 
494 aa  72.8  0.000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5048  nitrogen metabolism transcriptional regulator NtrC  33.61 
 
 
478 aa  72.4  0.000000000002  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA2541  nitrogen regulation protein NR(I)  32.03 
 
 
470 aa  72.4  0.000000000002  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5101  nitrogen metabolism transcriptional regulator NtrC  33.61 
 
 
478 aa  72.4  0.000000000002  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1698  two component, sigma54 specific, transcriptional regulator, Fis family  29.77 
 
 
457 aa  72.8  0.000000000002  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000740904 
 
 
-
 
NC_011146  Gbem_3413  two component, sigma54 specific, transcriptional regulator, Fis family  35.85 
 
 
453 aa  72.8  0.000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2786  two component, sigma54 specific, Fis family transcriptional regulator  38.74 
 
 
477 aa  72.4  0.000000000002  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3941  two component transcriptional regulator  38.18 
 
 
254 aa  72.4  0.000000000002  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0990172 
 
 
-
 
NC_008146  Mmcs_3926  two component transcriptional regulator  38.18 
 
 
254 aa  72.4  0.000000000002  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  30.83 
 
 
411 aa  72.8  0.000000000002  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_008340  Mlg_0016  nitrogen metabolism transcriptional regulator NtrC  33.88 
 
 
468 aa  72.4  0.000000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0855054  normal  0.786337 
 
 
-
 
NC_009512  Pput_4923  nitrogen metabolism transcriptional regulator NtrC  33.61 
 
 
478 aa  72.4  0.000000000002  Pseudomonas putida F1  Bacteria  normal  0.924842  normal 
 
 
-
 
NC_008554  Sfum_2764  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
466 aa  72  0.000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  31.82 
 
 
458 aa  72.4  0.000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4000  two component transcriptional regulator  38.18 
 
 
254 aa  72.4  0.000000000002  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1495  sigma-54 dependent DNA-binding response regulator  31.39 
 
 
458 aa  71.6  0.000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  0.301103  n/a   
 
 
-
 
NC_010501  PputW619_0415  nitrogen metabolism transcriptional regulator, NtrC, Fis family  34.19 
 
 
478 aa  71.6  0.000000000003  Pseudomonas putida W619  Bacteria  normal  normal  0.855382 
 
 
-
 
NC_007498  Pcar_1994  two component signal transduction response regulator  32.84 
 
 
477 aa  72  0.000000000003  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1649  two component, sigma54 specific, Fis family transcriptional regulator  34.38 
 
 
479 aa  72  0.000000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  33.63 
 
 
137 aa  71.6  0.000000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0636  response regulator receiver protein  34.48 
 
 
124 aa  71.6  0.000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.621219  normal 
 
 
-
 
NC_011883  Ddes_0853  two component, sigma54 specific, transcriptional regulator, Fis family  30.28 
 
 
459 aa  71.2  0.000000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0538681  n/a   
 
 
-
 
NC_011883  Ddes_0817  response regulator receiver sensor signal transduction histidine kinase  32.41 
 
 
451 aa  71.6  0.000000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_4562  two component transcriptional regulator  37.38 
 
 
247 aa  71.2  0.000000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.488322  normal  0.0982939 
 
 
-
 
NC_008726  Mvan_4429  two component transcriptional regulator  36.36 
 
 
250 aa  71.2  0.000000000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.133228  normal 
 
 
-
 
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