Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1994 |
Symbol | ntrC |
ID | 3724664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 2325640 |
End bp | 2327073 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637751595 |
Product | two component signal transduction response regulator |
Protein accession | YP_357405 |
Protein GI | 77919590 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATTC AACGCATTCT GGTAGCAGAT GACGAGGAAA GCATCCGCTG GGTGCTGCGC AAGGCGCTCA CCAAACAAGG CTTCACCGTG GATCTGGCCG CCGATGGCGA AGAAGCCAAA ACCTTCTTCA AACGCCGCCA ATACGACCTG GCTATTTTGG ATATCAAAAT GCCCGACTTG TCGGGCCTGG AACTGCTGCG CTATTTTCAG GAACAGCGTC CAGAAATGCT GGTCATCATC ATCACCGCCG AATCTTCCAT GAAAAATGCC GTGGAAGCCA TGAAACTGGG GGCGTACGAT TACCTGACCA AGCCTTTCGA TCTGGATGCC CTGGAAGCCA TCATTGTCAA AGCCCAGAAA GCCGCCGCGG CAGCCGAAGA AGTGCATCGC CTCAAGACCG AACTGAAGGA ACAGTACCCA CTGGATCGGG CGATTATCGG CAAAAGCAAG CCGATGCAGG AAATATACAA GATCCTCGGC CGGGTGGCGC CAACGGATGT CACCGTGCTC ATTACCGGCG AAAGCGGTAC CGGCAAGGAG TTGGTGGCCA GGGCGATTCA TTATAACAGC CCCAGGGTCG GCAAGGACTT CCTGGCCCTT AACTGTGCCG CCATCCCCAG CGAACTTCTT GAAAGTGAAC TTTTCGGTCA CGAAAAAGGG GCGTTTACCG GCGCCACGGA ACGCAAAATA GGCAAGTTCG AACAAGCCAG CGGCGGGACC CTGTTTCTGG ATGAAATCGG CGACATGCCT CTGGAGCTGC AAGCCAAACT GCTGCGTGTT TTACAGGAGC GGGAAATCAC TCGTACCGGC GGCAGCAGCT CGATACCCGT GGATGTACGC ATCGTTGCGG CCACCAACCA GAATCTGCGC GAACAGGTTG CCGCCAGAGA GTTCCGAGAA GATCTTTTTT ACCGCCTCAA CGTGGTGCCG ATTGCCATCC CGCCCCTGCG GGACCGGCGG GACGACATCC CCTTGCTGGT CGAATACTTC CTGGATCGGG TCCGCGAAGA CCTTAACGTC GGGGTGCAGG GATGCACCAA GGAAGCCATG GCGCACCTCA GGCGTCACGA CTGGCCGGGC AACGTCCGCG AGCTGGAAAA CACCCTCAAA CGGGCGGCCC TGCTGTCCTC CGACCAACTC CTCACGCCCA ACGATTTTCC CGGATTGGTA CCGGAGCCGG CCCGCAAGGA AACCGATGAA TCGCTTGAAG CGCTGATTTC AAACAAACTG CTGGCGACTT TCGCGCCGAT GGACGTCAAC GAACTGAACA ATCTCTACCA GATGGTTCTG CATCAGATGG AACGGCCGCT GATTTCCATT ATCCTGGAAA AAACCCGTGG CAACCAGGTA AGGGCCGCCG AGATCCTGGG CATCAATCGC AACACTCTGC GCAAAAAGAT CCAGACCCTG GATATCGACC TGAAAGAACT TTAG
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Protein sequence | MSIQRILVAD DEESIRWVLR KALTKQGFTV DLAADGEEAK TFFKRRQYDL AILDIKMPDL SGLELLRYFQ EQRPEMLVII ITAESSMKNA VEAMKLGAYD YLTKPFDLDA LEAIIVKAQK AAAAAEEVHR LKTELKEQYP LDRAIIGKSK PMQEIYKILG RVAPTDVTVL ITGESGTGKE LVARAIHYNS PRVGKDFLAL NCAAIPSELL ESELFGHEKG AFTGATERKI GKFEQASGGT LFLDEIGDMP LELQAKLLRV LQEREITRTG GSSSIPVDVR IVAATNQNLR EQVAAREFRE DLFYRLNVVP IAIPPLRDRR DDIPLLVEYF LDRVREDLNV GVQGCTKEAM AHLRRHDWPG NVRELENTLK RAALLSSDQL LTPNDFPGLV PEPARKETDE SLEALISNKL LATFAPMDVN ELNNLYQMVL HQMERPLISI ILEKTRGNQV RAAEILGINR NTLRKKIQTL DIDLKEL
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