Gene Pcar_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1994 
SymbolntrC 
ID3724664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2325640 
End bp2327073 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content56% 
IMG OID637751595 
Producttwo component signal transduction response regulator 
Protein accessionYP_357405 
Protein GI77919590 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR01818] nitrogen regulation protein NR(I) 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATTC AACGCATTCT GGTAGCAGAT GACGAGGAAA GCATCCGCTG GGTGCTGCGC 
AAGGCGCTCA CCAAACAAGG CTTCACCGTG GATCTGGCCG CCGATGGCGA AGAAGCCAAA
ACCTTCTTCA AACGCCGCCA ATACGACCTG GCTATTTTGG ATATCAAAAT GCCCGACTTG
TCGGGCCTGG AACTGCTGCG CTATTTTCAG GAACAGCGTC CAGAAATGCT GGTCATCATC
ATCACCGCCG AATCTTCCAT GAAAAATGCC GTGGAAGCCA TGAAACTGGG GGCGTACGAT
TACCTGACCA AGCCTTTCGA TCTGGATGCC CTGGAAGCCA TCATTGTCAA AGCCCAGAAA
GCCGCCGCGG CAGCCGAAGA AGTGCATCGC CTCAAGACCG AACTGAAGGA ACAGTACCCA
CTGGATCGGG CGATTATCGG CAAAAGCAAG CCGATGCAGG AAATATACAA GATCCTCGGC
CGGGTGGCGC CAACGGATGT CACCGTGCTC ATTACCGGCG AAAGCGGTAC CGGCAAGGAG
TTGGTGGCCA GGGCGATTCA TTATAACAGC CCCAGGGTCG GCAAGGACTT CCTGGCCCTT
AACTGTGCCG CCATCCCCAG CGAACTTCTT GAAAGTGAAC TTTTCGGTCA CGAAAAAGGG
GCGTTTACCG GCGCCACGGA ACGCAAAATA GGCAAGTTCG AACAAGCCAG CGGCGGGACC
CTGTTTCTGG ATGAAATCGG CGACATGCCT CTGGAGCTGC AAGCCAAACT GCTGCGTGTT
TTACAGGAGC GGGAAATCAC TCGTACCGGC GGCAGCAGCT CGATACCCGT GGATGTACGC
ATCGTTGCGG CCACCAACCA GAATCTGCGC GAACAGGTTG CCGCCAGAGA GTTCCGAGAA
GATCTTTTTT ACCGCCTCAA CGTGGTGCCG ATTGCCATCC CGCCCCTGCG GGACCGGCGG
GACGACATCC CCTTGCTGGT CGAATACTTC CTGGATCGGG TCCGCGAAGA CCTTAACGTC
GGGGTGCAGG GATGCACCAA GGAAGCCATG GCGCACCTCA GGCGTCACGA CTGGCCGGGC
AACGTCCGCG AGCTGGAAAA CACCCTCAAA CGGGCGGCCC TGCTGTCCTC CGACCAACTC
CTCACGCCCA ACGATTTTCC CGGATTGGTA CCGGAGCCGG CCCGCAAGGA AACCGATGAA
TCGCTTGAAG CGCTGATTTC AAACAAACTG CTGGCGACTT TCGCGCCGAT GGACGTCAAC
GAACTGAACA ATCTCTACCA GATGGTTCTG CATCAGATGG AACGGCCGCT GATTTCCATT
ATCCTGGAAA AAACCCGTGG CAACCAGGTA AGGGCCGCCG AGATCCTGGG CATCAATCGC
AACACTCTGC GCAAAAAGAT CCAGACCCTG GATATCGACC TGAAAGAACT TTAG
 
Protein sequence
MSIQRILVAD DEESIRWVLR KALTKQGFTV DLAADGEEAK TFFKRRQYDL AILDIKMPDL 
SGLELLRYFQ EQRPEMLVII ITAESSMKNA VEAMKLGAYD YLTKPFDLDA LEAIIVKAQK
AAAAAEEVHR LKTELKEQYP LDRAIIGKSK PMQEIYKILG RVAPTDVTVL ITGESGTGKE
LVARAIHYNS PRVGKDFLAL NCAAIPSELL ESELFGHEKG AFTGATERKI GKFEQASGGT
LFLDEIGDMP LELQAKLLRV LQEREITRTG GSSSIPVDVR IVAATNQNLR EQVAAREFRE
DLFYRLNVVP IAIPPLRDRR DDIPLLVEYF LDRVREDLNV GVQGCTKEAM AHLRRHDWPG
NVRELENTLK RAALLSSDQL LTPNDFPGLV PEPARKETDE SLEALISNKL LATFAPMDVN
ELNNLYQMVL HQMERPLISI ILEKTRGNQV RAAEILGINR NTLRKKIQTL DIDLKEL