Gene Ddes_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0817 
Symbol 
ID7284492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp955901 
End bp957256 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content64% 
IMG OID643581614 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_002479403 
Protein GI220904091 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTGC TTGTTGTGGA TGACGAATCA GCCTTTGCCG GGCCTTTGGC CCAGCGCCTG 
AGCCTGCGCG GCATGGATGC GCGCACCGCC CGCGATGCGC GTGAGGCTTT GTCCATCCTG
CAGGCATGGC CCGCGGAACT GGTGTTTCTT GATGTGGGCC TGCCCGGTAT GGACGGCGTT
GCCCTGCTCA AGCTTTTGCG CGAGCAATAT GCACAGACGG ATGTGGTCAT GCTTTCGGGT
TCCGCAGATA TGGGCAAAGC TGTGCAGGCC ATGCGGCGGG GAGCGCTGAA CTGGCTCTCC
AAGCCCGCGG ATATTGAGCA GGTGCTTGAA GAATGCCGCA AGGCGCGGGA GCGGGCCGCA
GCCCGGCAAG AGGCGGCCCG CCTTGCCGAA GCCGCGCGCT GGCGCAGTCT GGGGCGGGTT
GCCGAAGGGG TGGCCCATGA GGTGAATAAT CCCCTTAACA TCATGATGCA GGCCGCCGGG
CTTATCCGCG ATTGCCTGGA TGAACCGGAG GCTCAGGCCC TGGCTGATGT GGACGAAATG
CGCGAAGCCG TCAATACCAT TCGCGCCCAG AGTCTGCGCG TGCGGGAAAT AACGCGTAAG
CTGCTCATGG TGGGGCATGG GCTGGATGCG CGCACCGGGC CGCTGGATGT GGCTGCGGTT
ATTGATGAAA GCCTTGATCT GCTGCGCCAC AGGATTGAAG CGGCAGGTCT GCGCTGCCAG
GTGGATCTTT CCGGCGCGTA TGTGTTCCCG GGCCATGAAG CTGCTGCACA GGAAACTGCT
GCACAGGAAA CTGCTGCGCC GGGCGCTCTC GGGGAAGCTG CTGCGGAGGC GGCGGAAGAG
GCGGGCAGCG CTGCTCCGCG CCCTTGGGGT TCGGCCCCGG AATTGCGGCA GATATTTCTG
CATCTATTTG AAAATGCTCT GGATGCCATG CCTCATGGTG GATTGGTGCA GGTCTCGGCC
AGGCTGAGAC GTGACGGACA GGGAAGGAGC TGGTACGATC TGCTCGTTGC CGACAGCGGC
CCCGGCATTG AACCGGACAT CCTGCCCCAT ATTTTTGAAC CATTTTTCAG TTCGCGTGCC
CTTCAAGGCG GATTCGGCGG TCATGACCAA TACCATGACA GCCATACCAG CGGCAGTGCC
ATGCGCCCCG GAACTGCCGT ACAATCCCAC ATGGGCCGCT ATGCGGGTCT CGGCCTTGCC
GTTGCCCGCT CGCTGGCGCA CGCGCGTGGC GGCGAACTCT CCGCCGCCAA CAGCCAGCAA
GGCGGGGCAG TTTTCTGCCT GAGCCTTCCC CTGGCACAAG CGCCCGCGGC CTCCGGTCAG
GCTGCGGGTG ACCGCTCTCC GGACGGCGGC CTTTGA
 
Protein sequence
MRVLVVDDES AFAGPLAQRL SLRGMDARTA RDAREALSIL QAWPAELVFL DVGLPGMDGV 
ALLKLLREQY AQTDVVMLSG SADMGKAVQA MRRGALNWLS KPADIEQVLE ECRKARERAA
ARQEAARLAE AARWRSLGRV AEGVAHEVNN PLNIMMQAAG LIRDCLDEPE AQALADVDEM
REAVNTIRAQ SLRVREITRK LLMVGHGLDA RTGPLDVAAV IDESLDLLRH RIEAAGLRCQ
VDLSGAYVFP GHEAAAQETA AQETAAPGAL GEAAAEAAEE AGSAAPRPWG SAPELRQIFL
HLFENALDAM PHGGLVQVSA RLRRDGQGRS WYDLLVADSG PGIEPDILPH IFEPFFSSRA
LQGGFGGHDQ YHDSHTSGSA MRPGTAVQSH MGRYAGLGLA VARSLAHARG GELSAANSQQ
GGAVFCLSLP LAQAPAASGQ AAGDRSPDGG L