More than 300 homologs were found in PanDaTox collection
for query gene Sfum_0633 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_0633  response regulator receiver protein  100 
 
 
133 aa  263  5.999999999999999e-70  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.546392  normal 
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  41.54 
 
 
151 aa  108  2.0000000000000002e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  44.44 
 
 
141 aa  102  2e-21  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  35.66 
 
 
147 aa  100  5e-21  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  40.32 
 
 
139 aa  99  2e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  39.52 
 
 
135 aa  99  2e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0636  response regulator receiver protein  46.55 
 
 
124 aa  98.6  2e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.621219  normal 
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  42.97 
 
 
157 aa  97.8  4e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2822  response regulator receiver protein  42.74 
 
 
135 aa  94.7  3e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  41.32 
 
 
126 aa  94.4  5e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  39.83 
 
 
144 aa  94.4  5e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  45.08 
 
 
131 aa  93.6  9e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  44.35 
 
 
153 aa  91.7  3e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  35.71 
 
 
157 aa  90.9  5e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2828  response regulator receiver sensor signal transduction histidine kinase  41.88 
 
 
410 aa  89.7  1e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  42.5 
 
 
408 aa  89.7  1e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  40.68 
 
 
147 aa  89.4  1e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  36.89 
 
 
301 aa  89.7  1e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2709  response regulator receiver sensor signal transduction histidine kinase  43.97 
 
 
501 aa  89.7  1e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  0.710197  normal  0.745824 
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  40.83 
 
 
141 aa  89  2e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_011769  DvMF_2346  response regulator receiver protein  39.67 
 
 
136 aa  89.4  2e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007954  Sden_1356  response regulator receiver  40.68 
 
 
386 aa  87.8  4e-17  Shewanella denitrificans OS217  Bacteria  normal  0.235342  n/a   
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  39.02 
 
 
151 aa  87  8e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  41.18 
 
 
142 aa  86.7  9e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  40.34 
 
 
374 aa  86.3  1e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  39.02 
 
 
382 aa  86.3  1e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  37.39 
 
 
121 aa  85.5  2e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  40.35 
 
 
135 aa  85.9  2e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  41.74 
 
 
120 aa  85.1  3e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1993  two component, sigma54 specific, transcriptional regulator, Fis family  36.21 
 
 
486 aa  85.1  3e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007912  Sde_1112  response regulator receiver domain-containing protein  40.34 
 
 
399 aa  85.1  3e-16  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0643  two component, sigma54 specific, Fis family transcriptional regulator  36.97 
 
 
478 aa  85.1  3e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  34.43 
 
 
470 aa  84.3  5e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  35.65 
 
 
119 aa  84.3  5e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  38.26 
 
 
122 aa  84.3  5e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  37.82 
 
 
147 aa  83.6  7e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  37.72 
 
 
476 aa  83.6  8e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  35.38 
 
 
142 aa  83.6  9e-16  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  42.2 
 
 
127 aa  83.2  0.000000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_007760  Adeh_1055  two component, sigma54 specific, Fis family transcriptional regulator  39.32 
 
 
481 aa  83.2  0.000000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.874499  n/a   
 
 
-
 
NC_011369  Rleg2_3169  two component, sigma54 specific, transcriptional regulator, Fis family  36.59 
 
 
444 aa  82.4  0.000000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.254755  normal  0.187976 
 
 
-
 
NC_009921  Franean1_5311  two component transcriptional regulator  37.19 
 
 
246 aa  82.4  0.000000000000002  Frankia sp. EAN1pec  Bacteria  normal  0.554395  normal  0.310406 
 
 
-
 
NC_013132  Cpin_0693  two component transcriptional regulator, winged helix family  36.75 
 
 
229 aa  82  0.000000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  33.05 
 
 
144 aa  82.4  0.000000000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_011898  Ccel_2113  two component transcriptional regulator, AraC family  35.9 
 
 
538 aa  81.6  0.000000000000003  Clostridium cellulolyticum H10  Bacteria  normal  0.141697  n/a   
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  38.94 
 
 
455 aa  81.6  0.000000000000003  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_011145  AnaeK_1114  two component, sigma54 specific, transcriptional regulator, Fis family  38.46 
 
 
501 aa  81.3  0.000000000000004  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1183  two component, sigma54 specific, transcriptional regulator, Fis family  38.46 
 
 
481 aa  81.3  0.000000000000004  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1461  two component, sigma54 specific, transcriptional regulator, Fis family  37.93 
 
 
491 aa  81.3  0.000000000000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.750458 
 
 
-
 
NC_012850  Rleg_3460  two component, sigma54 specific, transcriptional regulator, Fis family  35.77 
 
 
444 aa  81.3  0.000000000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0376131  normal 
 
 
-
 
NC_009483  Gura_3647  two component, sigma-54 specific, Fis family transcriptional regulator  32.52 
 
 
471 aa  80.9  0.000000000000005  Geobacter uraniireducens Rf4  Bacteria  normal  0.0209004  n/a   
 
 
-
 
NC_009943  Dole_1364  two component, sigma54 specific, Fis family transcriptional regulator  34.88 
 
 
485 aa  80.9  0.000000000000005  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4770  two component, sigma54 specific, Fis family transcriptional regulator  35.83 
 
 
446 aa  80.9  0.000000000000005  Methylobacterium sp. 4-46  Bacteria  normal  0.133057  normal  0.593625 
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  31.97 
 
 
470 aa  80.5  0.000000000000006  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_013173  Dbac_1382  histidine kinase  37.82 
 
 
912 aa  80.9  0.000000000000006  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  34.13 
 
 
159 aa  80.5  0.000000000000007  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0399  response regulator receiver protein  33.05 
 
 
365 aa  80.5  0.000000000000007  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  34.75 
 
 
143 aa  80.5  0.000000000000007  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  36.75 
 
 
413 aa  80.5  0.000000000000008  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_008751  Dvul_0150  response regulator receiver protein  45.69 
 
 
134 aa  80.5  0.000000000000008  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal  0.680282 
 
 
-
 
NC_011883  Ddes_0817  response regulator receiver sensor signal transduction histidine kinase  39.45 
 
 
451 aa  80.1  0.000000000000009  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  36.59 
 
 
151 aa  79.7  0.00000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009675  Anae109_1105  two component, sigma54 specific, Fis family transcriptional regulator  35.77 
 
 
475 aa  79.7  0.00000000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.926771  normal  0.835973 
 
 
-
 
NC_013385  Adeg_0532  two component, sigma54 specific, transcriptional regulator, Fis family  38.05 
 
 
470 aa  79.7  0.00000000000001  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00706375  n/a   
 
 
-
 
NC_008321  Shewmr4_1312  response regulator receiver protein  34.62 
 
 
367 aa  79.7  0.00000000000001  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000399806  normal 
 
 
-
 
NC_008322  Shewmr7_1379  response regulator receiver protein  34.62 
 
 
367 aa  79.7  0.00000000000001  Shewanella sp. MR-7  Bacteria  hitchhiker  0.00673289  normal  0.16507 
 
 
-
 
NC_008345  Sfri_2806  response regulator receiver protein  34.31 
 
 
373 aa  79.7  0.00000000000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  38.98 
 
 
137 aa  80.1  0.00000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  33.63 
 
 
451 aa  79  0.00000000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_007575  Suden_1458  two component transcriptional regulator  35.19 
 
 
218 aa  79  0.00000000000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3036  response regulator receiver protein  39.66 
 
 
367 aa  79.3  0.00000000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  0.697745  hitchhiker  0.00756104 
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  37.9 
 
 
129 aa  79  0.00000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_008577  Shewana3_1372  response regulator receiver protein  35.38 
 
 
367 aa  79  0.00000000000002  Shewanella sp. ANA-3  Bacteria  normal  0.0119088  hitchhiker  0.0000873565 
 
 
-
 
NC_013223  Dret_1848  two component transcriptional regulator, winged helix family  32.03 
 
 
236 aa  78.2  0.00000000000003  Desulfohalobium retbaense DSM 5692  Bacteria  hitchhiker  0.0065624  normal 
 
 
-
 
NC_007908  Rfer_1982  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  39.83 
 
 
1355 aa  78.2  0.00000000000003  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  33.59 
 
 
129 aa  78.2  0.00000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1467  response regulator receiver protein  35.2 
 
 
367 aa  78.2  0.00000000000003  Shewanella baltica OS223  Bacteria  normal  0.0140274  normal 
 
 
-
 
NC_011901  Tgr7_1854  response regulator receiver protein  35.59 
 
 
445 aa  78.6  0.00000000000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.654411  n/a   
 
 
-
 
NC_008554  Sfum_0827  two component, sigma54 specific, Fis family transcriptional regulator  34.15 
 
 
447 aa  78.6  0.00000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2943  response regulator receiver modulated diguanylate cyclase  34.78 
 
 
438 aa  78.2  0.00000000000003  Magnetococcus sp. MC-1  Bacteria  normal  0.641955  normal 
 
 
-
 
NC_009438  Sputcn32_2546  response regulator receiver protein  35.24 
 
 
376 aa  77.8  0.00000000000004  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2359  putative two-component response regulator  38.33 
 
 
394 aa  77.8  0.00000000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2267  response regulator receiver protein  37.5 
 
 
367 aa  78.2  0.00000000000004  Shewanella amazonensis SB2B  Bacteria  normal  0.0287525  normal  0.0560142 
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  36.97 
 
 
151 aa  78.2  0.00000000000004  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  35.9 
 
 
127 aa  77.8  0.00000000000005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_013132  Cpin_6438  putative two component, sigma54 specific, transcriptional regulator, Fis family  31.9 
 
 
394 aa  77.8  0.00000000000005  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00615091  normal  0.383003 
 
 
-
 
NC_009052  Sbal_2896  response regulator receiver protein  38.24 
 
 
367 aa  77.8  0.00000000000005  Shewanella baltica OS155  Bacteria  hitchhiker  0.00201335  n/a   
 
 
-
 
NC_010581  Bind_0185  two component, sigma54 specific, Fis family transcriptional regulator  35.9 
 
 
446 aa  77.4  0.00000000000005  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.297369  normal 
 
 
-
 
NC_007952  Bxe_B1389  two component heavy metal response transcriptional regulator  39.83 
 
 
225 aa  77.8  0.00000000000005  Burkholderia xenovorans LB400  Bacteria  normal  0.717226  normal  0.091392 
 
 
-
 
NC_013521  Sked_01690  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  35.83 
 
 
217 aa  77.4  0.00000000000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.459553  normal  0.405302 
 
 
-
 
NC_009665  Shew185_2906  response regulator receiver protein  38.24 
 
 
367 aa  77.8  0.00000000000005  Shewanella baltica OS185  Bacteria  normal  0.0132666  n/a   
 
 
-
 
NC_008751  Dvul_2371  response regulator receiver protein  33.59 
 
 
233 aa  77.8  0.00000000000005  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_2277  two component transcriptional regulator  31.75 
 
 
248 aa  77.4  0.00000000000006  Salinispora arenicola CNS-205  Bacteria  normal  0.113906  normal  0.0109188 
 
 
-
 
NC_004578  PSPTO_2117  response regulator  36.67 
 
 
394 aa  77.4  0.00000000000006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0129975  n/a   
 
 
-
 
NC_007005  Psyr_1912  response regulator receiver:stage II sporulation E  36.67 
 
 
394 aa  77.4  0.00000000000006  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.432168  hitchhiker  0.00180426 
 
 
-
 
NC_013173  Dbac_2034  response regulator receiver protein  35.09 
 
 
300 aa  77.4  0.00000000000006  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2853  two component, sigma54 specific, Fis family transcriptional regulator  34.48 
 
 
476 aa  77.4  0.00000000000006  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  35.4 
 
 
403 aa  77.4  0.00000000000006  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3038  response regulator receiver protein  37.25 
 
 
367 aa  77  0.00000000000007  Shewanella baltica OS195  Bacteria  normal  0.0232368  normal 
 
 
-
 
NC_008740  Maqu_3740  two component transcriptional regulator  36.97 
 
 
226 aa  77  0.00000000000007  Marinobacter aquaeolei VT8  Bacteria  normal  0.487084  n/a   
 
 
-
 
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