Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5311 |
Symbol | |
ID | 5673645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6395674 |
End bp | 6396414 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641244168 |
Product | two component transcriptional regulator |
Protein accession | YP_001509575 |
Protein GI | 158317067 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.554395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.310406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGAGTAC TGGTGGTGGA CGACGACGCG GCTGTCCGCG AGTCGCTGGA GCGGTCGCTG AGGTTCGAGG GCTACGAGGT GCGCACGGCG CCCGACGGGG TCGCCGCGCT GGAGGTGGTG GCGCGCGACC AGCCGGACAT CGTCGTGCTC GACGTGATGA TGCCGAGGAT GGACGGCCTG GAGACCTGCC GCCGTCTGCG GGCGCGCGGT GACGACGTCC CCGTCCTCAT GCTGACGGCC CGTGACGGGC TGGCCGACCG GGTCAGCGGC CTCGACGTGG GCGCCGACGA CTACCTGGTG AAGCCCTTCG CGTTGGAGGA GCTGTTCGCC CGGCTGCGGG CGCTGATCCG GCGGTCCACC CTCGTGACAC GGGCCGGCGT GGGCCACGGC CCCGCGCACG GCGCCGAGCC GGGCCATGGT GTCCCCGCCG CGCTGTCGTA CGCGGGGGTG GCGCTCGACC CGGCGAGCCG CCAGGTCCTG CGGGAGGGCC GGGAGCTGAC GCTGACCAAG ACCGAGTTCG AGCTGCTCGA GCTGTTCCTG ACCCATCCGC GCCAGGTCCT CTCCCGATCG ATGATCATGG AGAAAGTCTG GGGCTACGAC TTCGGACCCT CCTCGAACTC CCTGGAGGTG TTCGTGAGCT ACCTGCGGCG CAAGCTCGAG GCCGGCGGTG AGCCACGGCT GCTGCACACG GTGCGCGGGG TGGGTTACGT CCTGCGTGAA CCCGCCGCCG ACCGGGTGTG A
|
Protein sequence | MRVLVVDDDA AVRESLERSL RFEGYEVRTA PDGVAALEVV ARDQPDIVVL DVMMPRMDGL ETCRRLRARG DDVPVLMLTA RDGLADRVSG LDVGADDYLV KPFALEELFA RLRALIRRST LVTRAGVGHG PAHGAEPGHG VPAALSYAGV ALDPASRQVL REGRELTLTK TEFELLELFL THPRQVLSRS MIMEKVWGYD FGPSSNSLEV FVSYLRRKLE AGGEPRLLHT VRGVGYVLRE PAADRV
|
| |