Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1372 |
Symbol | |
ID | 4478280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1584530 |
End bp | 1585633 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639725927 |
Product | response regulator receiver protein |
Protein accession | YP_869012 |
Protein GI | 117919820 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0119088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000873565 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGTTAA ATGATGTTTC TATTCTTTGG GTCGAAGACG ACCCGGTCTT TAGGCAAATC GTCGCCACTT TTCTGATTGG GCGCGGTGCC AAAGTAGTGC AGGCCTGCGA TGGTGAGCAG GGACTGTATA TTTTTAAGCA ACAACGTTTC GATATTATTC TTGCCGATCT CAGCATGCCT AAACTCGGTG GACTCGATAT GCTCAAGGAA ATGAGTAAAT TAGAGCCGCT GGTGCCTTCA ATTGTGGTCT CTGGTAATAA CGTAATGGCG GATGTCGTTG AAGCCCTGCG TGTTGGTGCC TGTGATTATC TCGTTAAACC CGTCCCCGAT TTATTTATCA TCGAACAAGC CATAAAACAG GGGTTGCAAC GACACCATTC CGATGATGTG ACTCAAGCAG AGTTTGATGC TTTATCTAAT CAAGAACTCA AGGATAACTT GGTTCTGTTA GAACAAAGTG TTGAGGCGGC TAAGCAAGTT CAGCAGCAGC TGTTTCCTGC CTCTAACATT AGCTATCCCA CGGCCAAAGT GGATTACAGT CTGTTTAAGA GTAGCGATAT AAGCAGTTAC TTTATTGATT CCACTATGGT GGGCAGTGAC TACCTCATTA TGTACATGGC CCATCTCTAT CCCGAAGACA ATAGAGCGGC TTTTGCCTGT GTGTTGCTGC GCAGTTTTGT TAACCAAAAG CTCAAAAGTT ATCGTAGCGG CCAAAGTAAG ACCATTATCG AGCCCTTCAA TATGTTGAGT TATTTGAACG AACGTTTAGT CAAATCTGGC CTCGATATTA CAGTCGATAT TATTTATGTC GCTATCGAAT TAACACGCTA TCGCGCCGCG ATTGCGCAAG CAGGTAAGGG TCTTAGGTGC TATTTGCGTA ATGATGAAGG TTTGAGTCCA TTAGCGCTTT CTGAGAGCTT GCAATTGGGG ATGTTAGATT GGGGCAAGCC GAGCATTCAG TTTCGCACTA TATTGCCGCA GGAGCAGCTT TGTATCGCAA CCAGTGAGCC AGAACACAAG CAGCAACTTT TAGAAAACCA ATTTAAAGGC CTTGTATATG ATCCGCAGTT ACCCGCGGGT GGCTTTCTGC AATTAAGCCT ATAA
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Protein sequence | MALNDVSILW VEDDPVFRQI VATFLIGRGA KVVQACDGEQ GLYIFKQQRF DIILADLSMP KLGGLDMLKE MSKLEPLVPS IVVSGNNVMA DVVEALRVGA CDYLVKPVPD LFIIEQAIKQ GLQRHHSDDV TQAEFDALSN QELKDNLVLL EQSVEAAKQV QQQLFPASNI SYPTAKVDYS LFKSSDISSY FIDSTMVGSD YLIMYMAHLY PEDNRAAFAC VLLRSFVNQK LKSYRSGQSK TIIEPFNMLS YLNERLVKSG LDITVDIIYV AIELTRYRAA IAQAGKGLRC YLRNDEGLSP LALSESLQLG MLDWGKPSIQ FRTILPQEQL CIATSEPEHK QQLLENQFKG LVYDPQLPAG GFLQLSL
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