More than 300 homologs were found in PanDaTox collection
for query gene Bcav_3419 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012669  Bcav_3419  putative two component transcriptional regulator, winged helix family  100 
 
 		 240 aa  469  1.0000000000000001e-131  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_3090  putative two component transcriptional regulator, winged helix family  80.43 
 
 		 241 aa  372  1e-102  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.0000121276 
 
 
-
 
NC_013521  Sked_04930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  80.62 
 
 		 249 aa  368  1e-101  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.793732  normal  1 
 
 
-
 
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  77.88 
 
 		 243 aa  352  2e-96  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_0439  putative two component transcriptional regulator, winged helix family  72.61 
 
 		 248 aa  348  6e-95  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.190602 
 
 
-
 
NC_013595  Sros_0895  response regulator receiver protein  66.52 
 
 		 237 aa  308  4e-83  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_2025  response regulator receiver protein  68.7 
 
 		 261 aa  306  2.0000000000000002e-82  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_0595  putative two component transcriptional regulator, winged helix family  67.52 
 
 		 237 aa  303  2.0000000000000002e-81  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0453  putative winged helix family two component transcriptional regulator  64.29 
 
 		 251 aa  300  1e-80  Thermobispora bispora DSM 43833  Bacteria  normal  0.190844  normal  0.275136 
 
 
-
 
NC_009664  Krad_0879  putative two component transcriptional regulator, winged helix family  66.82 
 
 		 259 aa  295  3e-79  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.249855  hitchhiker  0.00478466 
 
 
-
 
NC_009921  Franean1_6176  winged helix family two component response transcriptional regulator  66.37 
 
 		 247 aa  293  1e-78  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.186762 
 
 
-
 
NC_007777  Francci3_0443  response regulator receiver protein  65.92 
 
 		 250 aa  292  3e-78  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011886  Achl_2724  putative two component transcriptional regulator, winged helix family  61.5 
 
 		 232 aa  291  8e-78  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00387379 
 
 
-
 
NC_008541  Arth_3012  response regulator receiver protein  62.67 
 
 		 232 aa  291  8e-78  Arthrobacter sp. FB24  Bacteria  normal  0.721979  n/a   
 
 
-
 
NC_013131  Caci_8253  putative two component transcriptional regulator, winged helix family  67.76 
 
 		 264 aa  290  2e-77  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010816  BLD_1194  putative response regulator  61.02 
 
 		 266 aa  289  3e-77  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_4240  transcriptional regulator domain-containing protein  64.22 
 
 		 257 aa  285  4e-76  Nocardioides sp. JS614  Bacteria  normal  0.466466  n/a   
 
 
-
 
NC_013757  Gobs_4646  putative two component transcriptional regulator, winged helix family  64.86 
 
 		 249 aa  280  1e-74  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_6823  putative two component transcriptional regulator, winged helix family  66.96 
 
 		 250 aa  277  1e-73  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4376  putative two component transcriptional regulator, winged helix family  59.27 
 
 		 255 aa  277  1e-73  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_0337  winged helix family two component response transcriptional regulator  60.43 
 
 		 239 aa  271  5.000000000000001e-72  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0279779 
 
 
-
 
NC_007333  Tfu_2737  transcriptional regulatory protein  59.92 
 
 		 253 aa  271  9e-72  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_0293  winged helix family two component response transcriptional regulator  60.34 
 
 		 239 aa  269  2.9999999999999997e-71  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_3935  transcriptional regulator domain protein  61.76 
 
 		 270 aa  266  1e-70  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_4525  response regulator receiver protein  61.54 
 
 		 257 aa  267  1e-70  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_4612  response regulator receiver protein  61.54 
 
 		 257 aa  267  1e-70  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_4908  response regulator receiver protein  61.54 
 
 		 257 aa  267  1e-70  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_10833  transcriptional regulatory protein  65.52 
 
 		 255 aa  265  4e-70  Mycobacterium tuberculosis F11  Bacteria  normal  1  hitchhiker  0.00597919 
 
 
-
 
NC_008726  Mvan_5097  response regulator receiver protein  63.13 
 
 		 267 aa  265  5e-70  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_1650  response regulator receiver protein  61.16 
 
 		 278 aa  262  4e-69  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0110992  normal  1 
 
 
-
 
NC_013159  Svir_37670  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  61.61 
 
 		 256 aa  260  1e-68  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.0528352 
 
 
-
 
NC_014158  Tpau_3545  putative two component transcriptional regulator, winged helix family  64.25 
 
 		 243 aa  259  3e-68  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.61486  n/a   
 
 
-
 
NC_013947  Snas_6372  putative two component transcriptional regulator, winged helix family  56.84 
 
 		 236 aa  258  7e-68  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013721  HMPREF0424_0189  transcriptional regulatory protein, C-terminal domain protein  51.41 
 
 		 296 aa  254  7e-67  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_013235  Namu_4983  putative two component transcriptional regulator, winged helix family  60.18 
 
 		 232 aa  254  1.0000000000000001e-66  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_12898  transcriptional regulator  43.61 
 
 		 252 aa  149  3e-35  Mycobacterium tuberculosis F11  Bacteria  normal  0.385025  normal  1 
 
 
-
 
NC_013169  Ksed_03550  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  42.51 
 
 		 261 aa  142  5e-33  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.329191  normal  1 
 
 
-
 
NC_013440  Hoch_6843  putative two component transcriptional regulator, winged helix family  40.64 
 
 		 258 aa  137  2e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_944  transcriptional regulator  54.62 
 
 		 223 aa  136  3.0000000000000003e-31  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1126  transcriptional regulator  54.62 
 
 		 223 aa  135  5e-31  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.0000289398  n/a   
 
 
-
 
NC_013124  Afer_0241  putative two component transcriptional regulator, winged helix family  56.25 
 
 		 217 aa  132  6e-30  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0955  two component transcriptional regulator  53.08 
 
 		 223 aa  131  7.999999999999999e-30  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013165  Shel_19870  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  43.24 
 
 		 224 aa  125  4.0000000000000003e-28  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.931606  normal  1 
 
 
-
 
NC_002936  DET1162  transcriptional regulator, putative  43.87 
 
 		 238 aa  124  2e-27  Dehalococcoides ethenogenes 195  Bacteria  normal  0.829609  n/a   
 
 
-
 
NC_006274  BCZK1193  response regulator  37.17 
 
 		 223 aa  122  5e-27  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  37.17 
 
 		 223 aa  122  5e-27  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  36.65 
 
 		 223 aa  122  6e-27  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  36.65 
 
 		 223 aa  122  6e-27  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  37.17 
 
 		 223 aa  122  7e-27  Bacillus cereus G9842  Bacteria  normal  1  normal  0.910988 
 
 
-
 
NC_005957  BT9727_1191  response regulator  36.65 
 
 		 223 aa  121  8e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  37.17 
 
 		 223 aa  121  9e-27  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  37.17 
 
 		 223 aa  121  9e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  37.84 
 
 		 229 aa  120  9.999999999999999e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.834843 
 
 
-
 
NC_013170  Ccur_08240  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  50 
 
 		 236 aa  120  1.9999999999999998e-26  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.956318  normal  0.778898 
 
 
-
 
NC_009654  Mmwyl1_4400  two component transcriptional regulator  40.21 
 
 		 236 aa  120  1.9999999999999998e-26  Marinomonas sp. MWYL1  Bacteria  normal  0.998417  normal  1 
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  39.68 
 
 		 237 aa  119  3e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  36.52 
 
 		 230 aa  119  4.9999999999999996e-26  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  36.65 
 
 		 223 aa  119  4.9999999999999996e-26  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  37.17 
 
 		 223 aa  119  6e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  37.14 
 
 		 236 aa  119  6e-26  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  38.25 
 
 		 232 aa  119  6e-26  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  38.1 
 
 		 234 aa  118  9e-26  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_013235  Namu_4929  two component transcriptional regulator, winged helix family  39.38 
 
 		 226 aa  117  9.999999999999999e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  37.5 
 
 		 235 aa  117  9.999999999999999e-26  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  44.52 
 
 		 239 aa  116  1.9999999999999998e-25  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  44.52 
 
 		 239 aa  116  1.9999999999999998e-25  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  41.62 
 
 		 231 aa  117  1.9999999999999998e-25  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_3419  two component transcriptional regulator  35.68 
 
 		 242 aa  116  3e-25  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  38.2 
 
 		 227 aa  116  3.9999999999999997e-25  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  34.84 
 
 		 239 aa  116  3.9999999999999997e-25  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  36.09 
 
 		 231 aa  115  3.9999999999999997e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009253  Dred_1903  two component transcriptional regulator  37.36 
 
 		 230 aa  115  5e-25  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  34.59 
 
 		 228 aa  115  5e-25  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_009674  Bcer98_1021  two component transcriptional regulator  36.55 
 
 		 223 aa  115  6e-25  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_007963  Csal_3253  two component transcriptional regulator  41.61 
 
 		 229 aa  115  6.9999999999999995e-25  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  39.04 
 
 		 225 aa  115  6.9999999999999995e-25  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  36.41 
 
 		 230 aa  115  7.999999999999999e-25  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  37.84 
 
 		 240 aa  115  8.999999999999998e-25  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal  1 
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  37.56 
 
 		 235 aa  114  8.999999999999998e-25  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_010718  Nther_1220  two component transcriptional regulator, winged helix family  35.45 
 
 		 233 aa  114  1.0000000000000001e-24  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  hitchhiker  0.00991602 
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  39.68 
 
 		 235 aa  114  1.0000000000000001e-24  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  39.68 
 
 		 235 aa  114  1.0000000000000001e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_011729  PCC7424_2242  two component transcriptional regulator, winged helix family  35.27 
 
 		 224 aa  114  1.0000000000000001e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.415885 
 
 
-
 
NC_011830  Dhaf_2286  two component transcriptional regulator, winged helix family  38.33 
 
 		 231 aa  114  1.0000000000000001e-24  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000188753  n/a   
 
 
-
 
NC_011725  BCB4264_A5385  DNA-binding response regulator  36.87 
 
 		 223 aa  114  1.0000000000000001e-24  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_2015  putative two component transcriptional regulator, winged helix family  47.2 
 
 		 224 aa  114  1.0000000000000001e-24  Eggerthella lenta DSM 2243  Bacteria  normal  0.0839248  hitchhiker  0.0000000000000188648 
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  38.46 
 
 		 235 aa  114  2.0000000000000002e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  39.68 
 
 		 235 aa  114  2.0000000000000002e-24  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  39.68 
 
 		 235 aa  114  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  35.75 
 
 		 228 aa  114  2.0000000000000002e-24  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  39.68 
 
 		 235 aa  114  2.0000000000000002e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  39.68 
 
 		 235 aa  114  2.0000000000000002e-24  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  39.68 
 
 		 235 aa  114  2.0000000000000002e-24  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  36.11 
 
 		 226 aa  113  2.0000000000000002e-24  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  39.68 
 
 		 235 aa  114  2.0000000000000002e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011830  Dhaf_1756  two component transcriptional regulator, winged helix family  35.56 
 
 		 230 aa  113  2.0000000000000002e-24  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.769657  n/a   
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  37.84 
 
 		 236 aa  114  2.0000000000000002e-24  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal  1 
 
 
-
 
NC_008345  Sfri_0485  two component transcriptional regulator, winged helix family protein  33.48 
 
 		 244 aa  114  2.0000000000000002e-24  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.773776  n/a   
 
 
-
 
NC_008699  Noca_2939  response regulator receiver  40.44 
 
 		 232 aa  113  2.0000000000000002e-24  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  39.68 
 
 		 235 aa  114  2.0000000000000002e-24  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>