Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2939 |
Symbol | |
ID | 4597440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3121200 |
End bp | 3121898 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639777544 |
Product | response regulator receiver |
Protein accession | YP_924128 |
Protein GI | 119717163 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAGAA TCCTCGTCGT GGACGACGAG CCACCGATCC GGACCGTGCT GCGCGGCTAC CTCGAGGCGG AGGGCTTCGT GGTGTCGGAG GCCGCGGACG GGGCCGCCGC GCTCGCCGAG CTGCGCGCCG GCTCGGCCGA GCCGGTCGAC CTGGTGCTGC TGGACGTGAT GATGCCCGGC ATGGACGGCC TGGAGGTCCT CCGCCGCCTG CGGACCGTCG CCGACACCTA CGTCATCCTG GTCACCGCGC GCAGCGAGGA GGTCGACAAG CTGGTCGGGC TCGGCGTCGG CGCGGACGAC TATGTCACCA AGCCGTTCAG CCCGCGTGAG GTCACCGCCC GGGTGAAGTC CGTGCTGCGT CGCCGACGCG ACGGAACCAC CGGCGACGAT CCGCGCCTGC GGTTCGACGA GCTGACCGTC GACCCGATCG GGCGGGAGAT CACGGTGGAC GGCGCGCCCG TGCGGCTGAC GGCCCTCGAG TTCGACCTCC TTCATGCCCT GGTGCGGGCC CCGGGCCGGG TGTTCTCGCG GGCGCAGCTG CTCGAGCAGG TGTGGGGCAA CGACTTCTAC GGCGACGAGC GGGTCGTCGA CGTCCACATC CGCAATCTCC GGGCCGAGCT CGGCGACGAC GCGACCGACC CGCACCTCAT CGCGACCGTG CGCGGCGTCG GCTACAAGTT CATCGGACGG CCCCGGTGA
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Protein sequence | MTRILVVDDE PPIRTVLRGY LEAEGFVVSE AADGAAALAE LRAGSAEPVD LVLLDVMMPG MDGLEVLRRL RTVADTYVIL VTARSEEVDK LVGLGVGADD YVTKPFSPRE VTARVKSVLR RRRDGTTGDD PRLRFDELTV DPIGREITVD GAPVRLTALE FDLLHALVRA PGRVFSRAQL LEQVWGNDFY GDERVVDVHI RNLRAELGDD ATDPHLIATV RGVGYKFIGR PR
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