More than 300 homologs were found in PanDaTox collection
for query gene Strop_2982 on replicon NC_009380
Organism: Salinispora tropica CNB-440



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_2982  binding-protein-dependent transport systems inner membrane component  100 
 
 
313 aa  625  1e-178  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0523048 
 
 
-
 
NC_009953  Sare_3206  binding-protein-dependent transport systems inner membrane component  95.85 
 
 
313 aa  590  1e-167  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.409377 
 
 
-
 
NC_013595  Sros_7706  sugar ABC transporter permease protein  48.56 
 
 
303 aa  288  1e-76  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.680022 
 
 
-
 
NC_013131  Caci_1940  binding-protein-dependent transport systems inner membrane component  46.47 
 
 
315 aa  274  1.0000000000000001e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.141616  normal  0.430519 
 
 
-
 
NC_013595  Sros_5529  binding-protein-dependent transport systems inner membrane component  48.37 
 
 
305 aa  263  3e-69  Streptosporangium roseum DSM 43021  Bacteria  normal  0.277323  normal  0.201918 
 
 
-
 
NC_013947  Snas_2856  binding-protein-dependent transport systems inner membrane component  46.35 
 
 
327 aa  251  9.000000000000001e-66  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.752891 
 
 
-
 
NC_013595  Sros_2048  binding-protein-dependent transport systems inner membrane component  48.88 
 
 
300 aa  247  2e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  0.587405  normal 
 
 
-
 
NC_013172  Bfae_23840  carbohydrate ABC transporter membrane protein  42.47 
 
 
325 aa  216  2.9999999999999998e-55  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3995  binding-protein-dependent transport systems inner membrane component  43.05 
 
 
308 aa  207  2e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.229892  normal  0.901532 
 
 
-
 
NC_008261  CPF_0557  ABC transporter, permease protein  33.11 
 
 
308 aa  152  7e-36  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0574  binding-protein-dependent transport systems inner membrane component  28.85 
 
 
296 aa  152  8e-36  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0541  ABC transporter, permease protein  33.22 
 
 
308 aa  152  1e-35  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1667  binding-protein-dependent transport systems inner membrane component  31.83 
 
 
296 aa  143  4e-33  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.227806  n/a   
 
 
-
 
NC_013515  Smon_0144  binding-protein-dependent transport systems inner membrane component  31.66 
 
 
295 aa  143  4e-33  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  32.7 
 
 
295 aa  142  9.999999999999999e-33  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2103  ABC transporter, permease protein  29.21 
 
 
296 aa  140  3e-32  Bacillus cereus AH187  Bacteria  normal  0.512676  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  31.89 
 
 
300 aa  138  1e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
310 aa  137  3.0000000000000003e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  32.04 
 
 
321 aa  137  3.0000000000000003e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2658  binding-protein-dependent transport systems inner membrane component  34.54 
 
 
309 aa  136  6.0000000000000005e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.43514  n/a   
 
 
-
 
NC_008541  Arth_1946  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
320 aa  136  6.0000000000000005e-31  Arthrobacter sp. FB24  Bacteria  normal  0.305055  n/a   
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  33.01 
 
 
310 aa  135  9.999999999999999e-31  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  30.43 
 
 
318 aa  135  9.999999999999999e-31  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  35.43 
 
 
322 aa  134  3e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
319 aa  133  3.9999999999999996e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4638  binding-protein dependent transport system inner membrane protein  31.23 
 
 
308 aa  132  5e-30  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000000461706  normal  0.23331 
 
 
-
 
NC_013595  Sros_0295  ABC-type sugar transport system periplasmic component-like protein  30.87 
 
 
300 aa  133  5e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0115  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
300 aa  131  1.0000000000000001e-29  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_4983  binding-protein-dependent transporter inner membrane protein  30.31 
 
 
310 aa  131  1.0000000000000001e-29  'Nostoc azollae' 0708  Bacteria  normal  0.300856  n/a   
 
 
-
 
NC_009486  Tpet_0117  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
300 aa  131  1.0000000000000001e-29  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  31.19 
 
 
306 aa  132  1.0000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
328 aa  131  1.0000000000000001e-29  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_013174  Jden_2071  binding-protein-dependent transport systems inner membrane component  33.1 
 
 
345 aa  130  3e-29  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.0000672298  normal 
 
 
-
 
NC_010001  Cphy_1530  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
295 aa  130  4.0000000000000003e-29  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  31.37 
 
 
309 aa  129  5.0000000000000004e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_1134  binding-protein-dependent transport systems inner membrane component  30.62 
 
 
300 aa  129  5.0000000000000004e-29  Clostridium cellulolyticum H10  Bacteria  normal  0.454536  n/a   
 
 
-
 
NC_008010  Dgeo_2695  binding-protein-dependent transport systems inner membrane component  32.19 
 
 
309 aa  129  8.000000000000001e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.179346  n/a   
 
 
-
 
NC_011898  Ccel_0201  binding-protein-dependent transport systems inner membrane component  29.93 
 
 
294 aa  129  9.000000000000001e-29  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_11550  carbohydrate ABC transporter membrane protein  33.44 
 
 
354 aa  128  1.0000000000000001e-28  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal  0.0144146 
 
 
-
 
NC_014212  Mesil_2392  binding-protein-dependent transport systems inner membrane component  32.15 
 
 
318 aa  128  1.0000000000000001e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  0.488692  normal 
 
 
-
 
NC_009718  Fnod_0627  binding-protein-dependent transport systems inner membrane component  30.36 
 
 
294 aa  128  1.0000000000000001e-28  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000558297  n/a   
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  32.2 
 
 
314 aa  126  5e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_010003  Pmob_0524  binding-protein-dependent transport systems inner membrane component  28.33 
 
 
303 aa  126  5e-28  Petrotoga mobilis SJ95  Bacteria  normal  0.693678  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  33.23 
 
 
288 aa  126  6e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  31.68 
 
 
330 aa  125  7e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_007516  Syncc9605_1449  lactose transport system permease protein  33.01 
 
 
290 aa  125  9e-28  Synechococcus sp. CC9605  Bacteria  normal  normal  0.0650773 
 
 
-
 
NC_013421  Pecwa_3671  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
332 aa  124  1e-27  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  30.46 
 
 
299 aa  125  1e-27  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_013131  Caci_7905  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
336 aa  125  1e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3074  sugar ABC transporter permease protein  31.6 
 
 
307 aa  125  1e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.146884 
 
 
-
 
NC_012917  PC1_3522  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
331 aa  125  1e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  32.37 
 
 
309 aa  124  2e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  30.64 
 
 
293 aa  124  2e-27  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_2048  binding-protein-dependent transport systems inner membrane component  31.96 
 
 
332 aa  124  2e-27  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  30.03 
 
 
298 aa  124  2e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2715  binding-protein-dependent transport systems inner membrane component  31.73 
 
 
289 aa  124  2e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013745  Htur_4489  binding-protein-dependent transport systems inner membrane component  30.61 
 
 
308 aa  123  4e-27  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.283214  n/a   
 
 
-
 
NC_012034  Athe_0615  binding-protein-dependent transport systems inner membrane component  29.14 
 
 
296 aa  123  4e-27  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2501  binding-protein-dependent transport systems inner membrane component  36.1 
 
 
312 aa  123  4e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  32.21 
 
 
307 aa  123  5e-27  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  32.19 
 
 
309 aa  123  5e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
316 aa  122  5e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  32.21 
 
 
307 aa  123  5e-27  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
292 aa  122  8e-27  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013521  Sked_21160  carbohydrate ABC transporter membrane protein  33.89 
 
 
314 aa  122  9e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103465  normal  0.100515 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  32.51 
 
 
313 aa  122  9e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  30.74 
 
 
314 aa  121  9.999999999999999e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  30.74 
 
 
314 aa  121  9.999999999999999e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1051  lactose transport system permease protein  32.74 
 
 
306 aa  121  9.999999999999999e-27  Synechococcus sp. CC9902  Bacteria  normal  0.390377  n/a   
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  34.65 
 
 
353 aa  122  9.999999999999999e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_008699  Noca_0870  binding-protein-dependent transport systems inner membrane component  31.4 
 
 
309 aa  121  9.999999999999999e-27  Nocardioides sp. JS614  Bacteria  normal  0.800905  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  32.59 
 
 
321 aa  121  9.999999999999999e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
315 aa  120  1.9999999999999998e-26  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  35.86 
 
 
307 aa  121  1.9999999999999998e-26  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
294 aa  120  3e-26  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  30.23 
 
 
311 aa  120  3.9999999999999996e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  31.99 
 
 
320 aa  120  3.9999999999999996e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_012669  Bcav_3676  binding-protein-dependent transport systems inner membrane component  31.63 
 
 
309 aa  120  3.9999999999999996e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3588  binding-protein-dependent transport systems inner membrane component  29.05 
 
 
338 aa  120  3.9999999999999996e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.786552  normal 
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  30.57 
 
 
290 aa  119  4.9999999999999996e-26  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  31.37 
 
 
300 aa  119  6e-26  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_0663  binding-protein-dependent transport systems inner membrane component  29.94 
 
 
333 aa  119  7.999999999999999e-26  Dickeya zeae Ech1591  Bacteria  normal  0.440104  n/a   
 
 
-
 
NC_013172  Bfae_27710  permease component of ABC-type sugar transporter  28.72 
 
 
294 aa  119  7.999999999999999e-26  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5026  binding-protein-dependent transport systems inner membrane component  27.76 
 
 
296 aa  119  9e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0515819  normal  0.562108 
 
 
-
 
NC_007488  RSP_3942  ABC sugar transporter, inner membrane subunit  28.96 
 
 
321 aa  118  9.999999999999999e-26  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.108149  n/a   
 
 
-
 
NC_013739  Cwoe_4453  binding-protein-dependent transport systems inner membrane component  33.65 
 
 
319 aa  118  9.999999999999999e-26  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3942  binding-protein-dependent transport systems inner membrane component  30.99 
 
 
322 aa  118  9.999999999999999e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.300337 
 
 
-
 
NC_012880  Dd703_0068  binding-protein-dependent transport systems inner membrane component  32.71 
 
 
315 aa  118  9.999999999999999e-26  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1686  binding-protein-dependent transport systems inner membrane component  31.99 
 
 
312 aa  117  1.9999999999999998e-25  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.746865  normal 
 
 
-
 
NC_012880  Dd703_0715  binding-protein-dependent transport systems inner membrane component  30.25 
 
 
333 aa  117  1.9999999999999998e-25  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2900  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
295 aa  117  1.9999999999999998e-25  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011899  Hore_13130  binding-protein-dependent transport systems inner membrane component  29.37 
 
 
293 aa  117  1.9999999999999998e-25  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3051  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
338 aa  117  1.9999999999999998e-25  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.335951  normal  0.466485 
 
 
-
 
NC_010816  BLD_1875  MalF-type ABC sugar transport systems permease component  29.53 
 
 
350 aa  117  1.9999999999999998e-25  Bifidobacterium longum DJO10A  Bacteria  normal  0.0432685  n/a   
 
 
-
 
NC_010816  BLD_1059  MalF-type ABC sugar transport systems permease component  28.87 
 
 
310 aa  117  3e-25  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5440  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
329 aa  117  3e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.811614  normal 
 
 
-
 
NC_010320  Teth514_0754  binding-protein-dependent transport systems inner membrane component  28.01 
 
 
324 aa  117  3e-25  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000204062  n/a   
 
 
-
 
NC_011898  Ccel_1026  binding-protein-dependent transport systems inner membrane component  28.23 
 
 
300 aa  116  3.9999999999999997e-25  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0038089  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  32.21 
 
 
283 aa  116  3.9999999999999997e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5759  binding-protein-dependent transport systems inner membrane component  30.66 
 
 
335 aa  116  3.9999999999999997e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.281814  normal  0.0722986 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>