More than 300 homologs were found in PanDaTox collection
for query gene Arth_1946 on replicon NC_008541
Organism: Arthrobacter sp. FB24



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008541  Arth_1946  binding-protein-dependent transport systems inner membrane component  100 
 
 
320 aa  647    Arthrobacter sp. FB24  Bacteria  normal  0.305055  n/a   
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  36.15 
 
 
306 aa  186  6e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  37.33 
 
 
307 aa  184  2.0000000000000003e-45  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  37.33 
 
 
307 aa  184  2.0000000000000003e-45  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  37.29 
 
 
319 aa  183  3e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  36.23 
 
 
299 aa  174  1.9999999999999998e-42  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_009664  Krad_0116  binding-protein-dependent transport systems inner membrane component  33.98 
 
 
317 aa  170  3e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.156333  normal  0.563407 
 
 
-
 
NC_013521  Sked_11550  carbohydrate ABC transporter membrane protein  33.57 
 
 
354 aa  169  8e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal  0.0144146 
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  35.31 
 
 
299 aa  167  2e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_012669  Bcav_3676  binding-protein-dependent transport systems inner membrane component  36.73 
 
 
309 aa  167  2.9999999999999998e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
330 aa  166  6.9999999999999995e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_013530  Xcel_2913  binding-protein-dependent transport systems inner membrane component  34.31 
 
 
299 aa  165  8e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2501  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
312 aa  164  2.0000000000000002e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  34.26 
 
 
295 aa  163  3e-39  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  35.17 
 
 
305 aa  162  6e-39  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_1530  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
295 aa  162  9e-39  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  38.49 
 
 
309 aa  161  2e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
290 aa  160  3e-38  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_008010  Dgeo_2695  binding-protein-dependent transport systems inner membrane component  36.6 
 
 
309 aa  158  1e-37  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.179346  n/a   
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  31.77 
 
 
328 aa  156  6e-37  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_012669  Bcav_3614  binding-protein-dependent transport systems inner membrane component  31.16 
 
 
287 aa  155  6e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.484603  normal  0.727796 
 
 
-
 
NC_011368  Rleg2_5607  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
292 aa  155  9e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.153616  normal 
 
 
-
 
NC_010816  BLD_1304  MalF-type ABC sugar transport systems permease component  31.88 
 
 
334 aa  155  9e-37  Bifidobacterium longum DJO10A  Bacteria  decreased coverage  0.00913134  n/a   
 
 
-
 
NC_013526  Tter_2615  binding-protein-dependent transport systems inner membrane component  37.36 
 
 
307 aa  155  9e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000296099  n/a   
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  33.89 
 
 
307 aa  154  1e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  32.57 
 
 
314 aa  153  2.9999999999999998e-36  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7038  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
309 aa  153  2.9999999999999998e-36  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_1114  sugar ABC transporter, permease protein  30.74 
 
 
301 aa  153  4e-36  Clostridium perfringens ATCC 13124  Bacteria  normal  0.212611  n/a   
 
 
-
 
NC_013739  Cwoe_0238  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
329 aa  152  5e-36  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.557491 
 
 
-
 
NC_013174  Jden_2071  binding-protein-dependent transport systems inner membrane component  33.12 
 
 
345 aa  152  1e-35  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.0000672298  normal 
 
 
-
 
NC_013595  Sros_4890  sugar transport system (permease)  32.75 
 
 
284 aa  151  1e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.096709  normal  0.1595 
 
 
-
 
NC_012854  Rleg_6533  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
292 aa  151  2e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.824779  normal  0.0156091 
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  33.85 
 
 
315 aa  151  2e-35  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
312 aa  151  2e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_013721  HMPREF0424_1315  ABC transporter, permease protein  35.27 
 
 
301 aa  151  2e-35  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010320  Teth514_1116  binding-protein-dependent transport systems inner membrane component  32.43 
 
 
296 aa  151  2e-35  Thermoanaerobacter sp. X514  Bacteria  normal  0.648492  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  35.35 
 
 
320 aa  149  4e-35  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0622  binding-protein-dependent transport systems inner membrane component  38.79 
 
 
294 aa  149  7e-35  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.431073  n/a   
 
 
-
 
NC_013131  Caci_5026  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
296 aa  149  8e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0515819  normal  0.562108 
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  32.75 
 
 
310 aa  149  8e-35  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
320 aa  148  1.0000000000000001e-34  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  30.23 
 
 
310 aa  148  1.0000000000000001e-34  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  36.5 
 
 
310 aa  147  2.0000000000000003e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2949  binding-protein-dependent transport systems inner membrane component  31.2 
 
 
302 aa  147  2.0000000000000003e-34  Sinorhizobium medicae WSM419  Bacteria  normal  0.261022  normal 
 
 
-
 
NC_011886  Achl_3533  binding-protein-dependent transport systems inner membrane component  31.86 
 
 
319 aa  147  2.0000000000000003e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.255158 
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  35.13 
 
 
301 aa  147  3e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_008541  Arth_3040  binding-protein-dependent transport systems inner membrane component  27.99 
 
 
315 aa  147  3e-34  Arthrobacter sp. FB24  Bacteria  normal  0.18898  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
299 aa  147  3e-34  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
310 aa  146  4.0000000000000006e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_011899  Hore_09500  binding-protein-dependent transport systems inner membrane component  29.14 
 
 
296 aa  146  4.0000000000000006e-34  Halothermothrix orenii H 168  Bacteria  decreased coverage  0.00000000000000144721  n/a   
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  30.77 
 
 
319 aa  146  5e-34  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_013521  Sked_31530  carbohydrate ABC transporter membrane protein  31.21 
 
 
313 aa  146  5e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.68002  normal 
 
 
-
 
NC_012034  Athe_0615  binding-protein-dependent transport systems inner membrane component  30.96 
 
 
296 aa  146  5e-34  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3995  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
308 aa  146  5e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.229892  normal  0.901532 
 
 
-
 
NC_010320  Teth514_1092  binding-protein-dependent transport systems inner membrane component  32.71 
 
 
291 aa  146  5e-34  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1290  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
297 aa  145  6e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
316 aa  145  6e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  32.27 
 
 
317 aa  145  7.0000000000000006e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  30.77 
 
 
319 aa  145  7.0000000000000006e-34  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_013526  Tter_2658  binding-protein-dependent transport systems inner membrane component  32.68 
 
 
309 aa  145  9e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.43514  n/a   
 
 
-
 
NC_014165  Tbis_2715  binding-protein-dependent transporter inner membrane component  28.73 
 
 
350 aa  145  9e-34  Thermobispora bispora DSM 43833  Bacteria  normal  0.392142  normal 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
313 aa  144  1e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2010  ABC transporter substrate binding inner membrane protein  27.85 
 
 
318 aa  145  1e-33  Psychromonas ingrahamii 37  Bacteria  normal  0.360583  normal 
 
 
-
 
NC_014212  Mesil_2055  binding-protein-dependent transport systems inner membrane component  31.99 
 
 
415 aa  145  1e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  0.33288  normal  0.443347 
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  31.29 
 
 
317 aa  145  1e-33  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
318 aa  145  1e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_011899  Hore_13130  binding-protein-dependent transport systems inner membrane component  32.84 
 
 
293 aa  144  1e-33  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
306 aa  144  2e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0201  binding-protein-dependent transport systems inner membrane component  28.15 
 
 
294 aa  144  2e-33  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0914  binding-protein-dependent transport systems inner membrane component  34.21 
 
 
310 aa  144  2e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  35 
 
 
309 aa  144  2e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
297 aa  144  2e-33  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
316 aa  144  3e-33  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1686  binding-protein-dependent transport systems inner membrane component  30.36 
 
 
312 aa  144  3e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.746865  normal 
 
 
-
 
NC_009667  Oant_0639  binding-protein-dependent transport systems inner membrane component  32.05 
 
 
305 aa  144  3e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.371496  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  32.25 
 
 
306 aa  144  3e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  36.88 
 
 
299 aa  143  3e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012880  Dd703_0068  binding-protein-dependent transport systems inner membrane component  32.52 
 
 
315 aa  143  4e-33  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
314 aa  143  4e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_013595  Sros_0295  ABC-type sugar transport system periplasmic component-like protein  30.48 
 
 
300 aa  143  4e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
294 aa  142  5e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  34.88 
 
 
318 aa  142  6e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_009636  Smed_3403  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
315 aa  142  6e-33  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2314  binding-protein-dependent transport systems inner membrane component  33.77 
 
 
310 aa  142  7e-33  Sinorhizobium medicae WSM419  Bacteria  normal  0.498676  normal  0.350334 
 
 
-
 
NC_013946  Mrub_2532  binding-protein-dependent transport systems inner membrane component  32.53 
 
 
417 aa  142  9e-33  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.636087 
 
 
-
 
NC_010184  BcerKBAB4_2801  binding-protein-dependent transport systems inner membrane component  34.33 
 
 
288 aa  142  9e-33  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.254018  n/a   
 
 
-
 
NC_011004  Rpal_0131  binding-protein-dependent transport systems inner membrane component  32.01 
 
 
319 aa  141  9.999999999999999e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.128042  n/a   
 
 
-
 
NC_008786  Veis_4548  binding-protein-dependent transport systems inner membrane component  36.74 
 
 
297 aa  141  9.999999999999999e-33  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  34.42 
 
 
288 aa  141  9.999999999999999e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  32.49 
 
 
300 aa  142  9.999999999999999e-33  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3942  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
322 aa  142  9.999999999999999e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.300337 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  31.77 
 
 
305 aa  141  9.999999999999999e-33  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_013739  Cwoe_5440  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
329 aa  141  9.999999999999999e-33  Conexibacter woesei DSM 14684  Bacteria  normal  0.811614  normal 
 
 
-
 
NC_011369  Rleg2_2645  binding-protein-dependent transport systems inner membrane component  34.38 
 
 
315 aa  141  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0166747  normal 
 
 
-
 
NC_008261  CPF_0557  ABC transporter, permease protein  29.35 
 
 
308 aa  141  1.9999999999999998e-32  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0541  ABC transporter, permease protein  29.35 
 
 
308 aa  141  1.9999999999999998e-32  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1752  binding-protein-dependent transport systems inner membrane component  30.48 
 
 
314 aa  141  1.9999999999999998e-32  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000089983 
 
 
-
 
NC_012850  Rleg_1867  binding-protein-dependent transport systems inner membrane component  29 
 
 
312 aa  141  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1637  binding-protein-dependent transport systems inner membrane component  31.29 
 
 
303 aa  141  1.9999999999999998e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0695484  n/a   
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  35.61 
 
 
307 aa  140  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
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