More than 300 homologs were found in PanDaTox collection
for query gene Bfae_23840 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_23840  carbohydrate ABC transporter membrane protein  100 
 
 
325 aa  636    Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3995  binding-protein-dependent transport systems inner membrane component  48.33 
 
 
308 aa  248  9e-65  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.229892  normal  0.901532 
 
 
-
 
NC_013595  Sros_7706  sugar ABC transporter permease protein  43.96 
 
 
303 aa  241  1e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.680022 
 
 
-
 
NC_013595  Sros_5529  binding-protein-dependent transport systems inner membrane component  44.56 
 
 
305 aa  230  2e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.277323  normal  0.201918 
 
 
-
 
NC_009953  Sare_3206  binding-protein-dependent transport systems inner membrane component  45.15 
 
 
313 aa  228  1e-58  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.409377 
 
 
-
 
NC_009380  Strop_2982  binding-protein-dependent transport systems inner membrane component  45.68 
 
 
313 aa  214  9.999999999999999e-55  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0523048 
 
 
-
 
NC_013131  Caci_1940  binding-protein-dependent transport systems inner membrane component  41.03 
 
 
315 aa  201  9.999999999999999e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.141616  normal  0.430519 
 
 
-
 
NC_013947  Snas_2856  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
327 aa  189  4e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.752891 
 
 
-
 
NC_008261  CPF_0557  ABC transporter, permease protein  32.13 
 
 
308 aa  180  4e-44  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0541  ABC transporter, permease protein  31.92 
 
 
308 aa  179  4e-44  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2048  binding-protein-dependent transport systems inner membrane component  41.75 
 
 
300 aa  178  1e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.587405  normal 
 
 
-
 
NC_014212  Mesil_2392  binding-protein-dependent transport systems inner membrane component  33.54 
 
 
318 aa  174  1.9999999999999998e-42  Meiothermus silvanus DSM 9946  Bacteria  normal  0.488692  normal 
 
 
-
 
NC_012034  Athe_0615  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
296 aa  168  1e-40  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
290 aa  166  6.9999999999999995e-40  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_012669  Bcav_3676  binding-protein-dependent transport systems inner membrane component  35.2 
 
 
309 aa  164  2.0000000000000002e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A2103  ABC transporter, permease protein  32.45 
 
 
296 aa  162  6e-39  Bacillus cereus AH187  Bacteria  normal  0.512676  n/a   
 
 
-
 
NC_011899  Hore_13130  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
293 aa  161  1e-38  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2658  binding-protein-dependent transport systems inner membrane component  34.62 
 
 
309 aa  161  2e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.43514  n/a   
 
 
-
 
NC_007413  Ava_4638  binding-protein dependent transport system inner membrane protein  35.51 
 
 
308 aa  159  5e-38  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000000461706  normal  0.23331 
 
 
-
 
NC_013515  Smon_0144  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
295 aa  159  5e-38  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  32.38 
 
 
319 aa  159  5e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0201  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
294 aa  158  1e-37  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
318 aa  158  2e-37  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
328 aa  157  3e-37  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_009429  Rsph17025_3650  ABC-type sugar transport system periplasmic component-like protein  33.54 
 
 
315 aa  155  1e-36  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0685768 
 
 
-
 
NC_008010  Dgeo_2695  binding-protein-dependent transport systems inner membrane component  35.82 
 
 
309 aa  154  2e-36  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.179346  n/a   
 
 
-
 
NC_010001  Cphy_0574  binding-protein-dependent transport systems inner membrane component  30.16 
 
 
296 aa  154  2e-36  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  35.12 
 
 
293 aa  152  5.9999999999999996e-36  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_1946  binding-protein-dependent transport systems inner membrane component  34.54 
 
 
320 aa  151  1e-35  Arthrobacter sp. FB24  Bacteria  normal  0.305055  n/a   
 
 
-
 
NC_011988  Avi_5738  ABC transporter membrane spanning protein (sugar)  32.92 
 
 
302 aa  151  1e-35  Agrobacterium vitis S4  Bacteria  normal  0.0678785  n/a   
 
 
-
 
NC_009718  Fnod_0627  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
294 aa  152  1e-35  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000558297  n/a   
 
 
-
 
NC_013525  Tter_1290  binding-protein-dependent transport systems inner membrane component  36.61 
 
 
297 aa  150  2e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_1134  binding-protein-dependent transport systems inner membrane component  30.47 
 
 
300 aa  150  2e-35  Clostridium cellulolyticum H10  Bacteria  normal  0.454536  n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  32.8 
 
 
321 aa  150  2e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1247  binding-protein-dependent transport systems inner membrane component  37.91 
 
 
308 aa  149  4e-35  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.732084 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  30.79 
 
 
309 aa  149  7e-35  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013171  Apre_1667  binding-protein-dependent transport systems inner membrane component  31.88 
 
 
296 aa  148  1.0000000000000001e-34  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.227806  n/a   
 
 
-
 
NC_013745  Htur_4489  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
308 aa  148  1.0000000000000001e-34  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.283214  n/a   
 
 
-
 
NC_007488  RSP_3942  ABC sugar transporter, inner membrane subunit  34.3 
 
 
321 aa  148  1.0000000000000001e-34  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.108149  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  31.83 
 
 
300 aa  148  1.0000000000000001e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012850  Rleg_1867  binding-protein-dependent transport systems inner membrane component  30.19 
 
 
312 aa  147  2.0000000000000003e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4983  binding-protein-dependent transporter inner membrane protein  32.14 
 
 
310 aa  147  2.0000000000000003e-34  'Nostoc azollae' 0708  Bacteria  normal  0.300856  n/a   
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  31.94 
 
 
330 aa  147  2.0000000000000003e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
299 aa  145  7.0000000000000006e-34  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_012669  Bcav_0941  binding-protein-dependent transport systems inner membrane component  33.12 
 
 
313 aa  145  8.000000000000001e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.737632 
 
 
-
 
NC_013521  Sked_11550  carbohydrate ABC transporter membrane protein  31 
 
 
354 aa  145  8.000000000000001e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal  0.0144146 
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  32.1 
 
 
310 aa  145  9e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0295  ABC-type sugar transport system periplasmic component-like protein  35.31 
 
 
300 aa  144  2e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  33.98 
 
 
306 aa  144  2e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  33.78 
 
 
299 aa  144  2e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_013235  Namu_0185  binding-protein-dependent transport systems inner membrane component  34.16 
 
 
315 aa  143  3e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  29.38 
 
 
317 aa  142  7e-33  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_012792  Vapar_6266  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
320 aa  142  8e-33  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  32.59 
 
 
309 aa  142  8e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008786  Veis_0945  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
309 aa  141  9.999999999999999e-33  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_2484  binding-protein-dependent transport systems inner membrane component  33.01 
 
 
318 aa  141  9.999999999999999e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.575298  n/a   
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  32.12 
 
 
314 aa  141  9.999999999999999e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_009972  Haur_1244  binding-protein-dependent transport systems inner membrane component  34.27 
 
 
297 aa  141  9.999999999999999e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3588  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
338 aa  141  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.786552  normal 
 
 
-
 
NC_011369  Rleg2_1686  binding-protein-dependent transport systems inner membrane component  30.52 
 
 
312 aa  141  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.746865  normal 
 
 
-
 
NC_011881  Achl_4613  binding-protein-dependent transport systems inner membrane component  33.65 
 
 
301 aa  140  3e-32  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
307 aa  140  3e-32  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_013131  Caci_6970  binding-protein-dependent transport systems inner membrane component  32.2 
 
 
305 aa  140  3e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0388505  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  33.9 
 
 
307 aa  140  3e-32  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_010001  Cphy_3408  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
293 aa  140  3e-32  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00259426  n/a   
 
 
-
 
NC_013411  GYMC61_2715  binding-protein-dependent transport systems inner membrane component  31.75 
 
 
289 aa  140  3e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_5440  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
329 aa  140  3.9999999999999997e-32  Conexibacter woesei DSM 14684  Bacteria  normal  0.811614  normal 
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  29.5 
 
 
306 aa  140  3.9999999999999997e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  31.13 
 
 
305 aa  139  4.999999999999999e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_00850  carbohydrate ABC transporter membrane protein  36.05 
 
 
320 aa  139  6e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  30.34 
 
 
316 aa  139  7e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2949  binding-protein-dependent transport systems inner membrane component  33.83 
 
 
302 aa  139  7.999999999999999e-32  Sinorhizobium medicae WSM419  Bacteria  normal  0.261022  normal 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  30.66 
 
 
295 aa  139  8.999999999999999e-32  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2984  binding-protein-dependent transport systems inner membrane component  32.73 
 
 
305 aa  138  1e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  33.56 
 
 
311 aa  138  1e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  32.07 
 
 
322 aa  137  2e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
306 aa  137  2e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
294 aa  137  3.0000000000000003e-31  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
299 aa  136  4e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  31.9 
 
 
320 aa  136  5e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
283 aa  135  8e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2784  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
306 aa  135  9.999999999999999e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.390449  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  33.98 
 
 
316 aa  135  9.999999999999999e-31  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  29.43 
 
 
275 aa  134  1.9999999999999998e-30  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2010  ABC transporter substrate binding inner membrane protein  31.77 
 
 
318 aa  134  1.9999999999999998e-30  Psychromonas ingrahamii 37  Bacteria  normal  0.360583  normal 
 
 
-
 
NC_009654  Mmwyl1_2763  binding-protein-dependent transport systems inner membrane component  29.11 
 
 
315 aa  134  1.9999999999999998e-30  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  34.96 
 
 
316 aa  134  1.9999999999999998e-30  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  30.79 
 
 
307 aa  134  1.9999999999999998e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_013172  Bfae_01490  carbohydrate ABC transporter membrane protein  31.16 
 
 
324 aa  133  3.9999999999999996e-30  Brachybacterium faecium DSM 4810  Bacteria  normal  0.659857  n/a   
 
 
-
 
NC_013172  Bfae_27710  permease component of ABC-type sugar transporter  32.96 
 
 
294 aa  133  3.9999999999999996e-30  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_4236  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
294 aa  133  3.9999999999999996e-30  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4298  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
294 aa  133  3.9999999999999996e-30  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.200183 
 
 
-
 
NC_011661  Dtur_0549  binding-protein-dependent transport systems inner membrane component  29.1 
 
 
297 aa  132  6e-30  Dictyoglomus turgidum DSM 6724  Bacteria  decreased coverage  0.0000488765  n/a   
 
 
-
 
NC_007948  Bpro_3816  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
327 aa  132  6e-30  Polaromonas sp. JS666  Bacteria  normal  0.744275  normal 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  34.75 
 
 
300 aa  132  6.999999999999999e-30  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_5200  binding-protein-dependent transport systems inner membrane component  33.13 
 
 
313 aa  132  7.999999999999999e-30  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1530  binding-protein-dependent transport systems inner membrane component  29.82 
 
 
295 aa  132  7.999999999999999e-30  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1304  MalF-type ABC sugar transport systems permease component  31.84 
 
 
334 aa  132  9e-30  Bifidobacterium longum DJO10A  Bacteria  decreased coverage  0.00913134  n/a   
 
 
-
 
NC_009620  Smed_4016  binding-protein-dependent transport systems inner membrane component  35.82 
 
 
302 aa  132  9e-30  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  29.5 
 
 
292 aa  131  1.0000000000000001e-29  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
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