More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_3650 on replicon NC_009429
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009429  Rsph17025_3650  ABC-type sugar transport system periplasmic component-like protein  100 
 
 
315 aa  634    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0685768 
 
 
-
 
NC_007488  RSP_3942  ABC sugar transporter, inner membrane subunit  90.79 
 
 
321 aa  560  1.0000000000000001e-159  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.108149  n/a   
 
 
-
 
NC_013595  Sros_0295  ABC-type sugar transport system periplasmic component-like protein  60.54 
 
 
300 aa  353  2e-96  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_27710  permease component of ABC-type sugar transporter  49.31 
 
 
294 aa  266  2.9999999999999995e-70  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  32.67 
 
 
319 aa  164  1.0000000000000001e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  34.08 
 
 
295 aa  164  2.0000000000000002e-39  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0615  binding-protein-dependent transport systems inner membrane component  30.74 
 
 
296 aa  163  3e-39  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1304  MalF-type ABC sugar transport systems permease component  32.54 
 
 
334 aa  162  6e-39  Bifidobacterium longum DJO10A  Bacteria  decreased coverage  0.00913134  n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
310 aa  162  8.000000000000001e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_012669  Bcav_2817  binding-protein-dependent transport systems inner membrane component  32.69 
 
 
310 aa  161  2e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.822068  normal 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  31.39 
 
 
307 aa  158  1e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
299 aa  156  3e-37  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  35.69 
 
 
287 aa  156  5.0000000000000005e-37  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  32.9 
 
 
309 aa  155  1e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  32.36 
 
 
309 aa  155  1e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_1775  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
309 aa  154  2e-36  Nakamurella multipartita DSM 44233  Bacteria  normal  0.114297  normal  0.0929805 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  32.75 
 
 
306 aa  153  2.9999999999999998e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  36.13 
 
 
321 aa  154  2.9999999999999998e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  35.09 
 
 
322 aa  153  4e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
290 aa  152  7e-36  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  34.74 
 
 
301 aa  151  1e-35  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_012669  Bcav_0941  binding-protein-dependent transport systems inner membrane component  34.14 
 
 
313 aa  151  1e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.737632 
 
 
-
 
NC_009620  Smed_4016  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
302 aa  151  2e-35  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
316 aa  150  3e-35  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  32.95 
 
 
313 aa  150  4e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1094  binding-protein-dependent transport systems inner membrane component  31.49 
 
 
307 aa  149  5e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
299 aa  149  6e-35  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_013521  Sked_15070  permease component of ABC-type sugar transporter  30.77 
 
 
311 aa  148  1.0000000000000001e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0771026  normal 
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  35.66 
 
 
306 aa  148  1.0000000000000001e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4638  binding-protein dependent transport system inner membrane protein  32.46 
 
 
308 aa  147  2.0000000000000003e-34  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000000461706  normal  0.23331 
 
 
-
 
NC_012669  Bcav_2875  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
318 aa  147  2.0000000000000003e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal  0.0272583 
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  32.53 
 
 
293 aa  147  3e-34  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0914  binding-protein-dependent transport systems inner membrane component  35.82 
 
 
310 aa  147  3e-34  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_01820  permease component of ABC-type sugar transporter  30.82 
 
 
312 aa  147  3e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  33.21 
 
 
300 aa  147  3e-34  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0541  ABC transporter, permease protein  30.86 
 
 
308 aa  146  4.0000000000000006e-34  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5408  carbohydrate ABC transporter membrane protein 1, CUT1 family  32.44 
 
 
305 aa  146  4.0000000000000006e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0557  ABC transporter, permease protein  30.86 
 
 
308 aa  146  5e-34  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
320 aa  146  5e-34  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_009664  Krad_3565  binding-protein-dependent transport systems inner membrane component  31.07 
 
 
316 aa  145  9e-34  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.702273  normal  0.0136241 
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  29.43 
 
 
293 aa  145  9e-34  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
306 aa  144  1e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2615  binding-protein-dependent transport systems inner membrane component  31.32 
 
 
307 aa  144  1e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000296099  n/a   
 
 
-
 
NC_008010  Dgeo_2695  binding-protein-dependent transport systems inner membrane component  32.21 
 
 
309 aa  145  1e-33  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.179346  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
309 aa  145  1e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_012669  Bcav_3614  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
287 aa  144  2e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.484603  normal  0.727796 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  32.59 
 
 
300 aa  144  2e-33  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  32.43 
 
 
317 aa  143  3e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_1315  ABC transporter, permease protein  32.22 
 
 
301 aa  143  3e-33  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013171  Apre_1667  binding-protein-dependent transport systems inner membrane component  31.64 
 
 
296 aa  143  3e-33  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.227806  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  34.51 
 
 
316 aa  143  4e-33  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  30.37 
 
 
311 aa  143  5e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  32.62 
 
 
305 aa  142  5e-33  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_3408  binding-protein-dependent transport systems inner membrane component  31.1 
 
 
293 aa  142  6e-33  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00259426  n/a   
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  28.72 
 
 
293 aa  142  7e-33  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  31.39 
 
 
307 aa  142  7e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  31.39 
 
 
307 aa  142  7e-33  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  31.34 
 
 
317 aa  142  9e-33  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_013595  Sros_6550  putative transmembrane binding-protein-dependent transporter  33.58 
 
 
303 aa  141  9.999999999999999e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.000015909 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  32.75 
 
 
288 aa  141  9.999999999999999e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
318 aa  141  9.999999999999999e-33  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  32.38 
 
 
314 aa  142  9.999999999999999e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_010320  Teth514_1100  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
300 aa  141  1.9999999999999998e-32  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29410  carbohydrate ABC transporter membrane protein  32.35 
 
 
322 aa  140  3e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  0.899558  n/a   
 
 
-
 
NC_011004  Rpal_0131  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
319 aa  140  3e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.128042  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  30.92 
 
 
291 aa  140  3e-32  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_014248  Aazo_4983  binding-protein-dependent transporter inner membrane protein  30.61 
 
 
310 aa  140  3.9999999999999997e-32  'Nostoc azollae' 0708  Bacteria  normal  0.300856  n/a   
 
 
-
 
NC_009636  Smed_2314  binding-protein-dependent transport systems inner membrane component  32.33 
 
 
310 aa  140  3.9999999999999997e-32  Sinorhizobium medicae WSM419  Bacteria  normal  0.498676  normal  0.350334 
 
 
-
 
NC_013411  GYMC61_2715  binding-protein-dependent transport systems inner membrane component  30.43 
 
 
289 aa  140  3.9999999999999997e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2658  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
309 aa  139  4.999999999999999e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.43514  n/a   
 
 
-
 
NC_011898  Ccel_1134  binding-protein-dependent transport systems inner membrane component  29.01 
 
 
300 aa  139  4.999999999999999e-32  Clostridium cellulolyticum H10  Bacteria  normal  0.454536  n/a   
 
 
-
 
NC_011886  Achl_1752  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
314 aa  139  4.999999999999999e-32  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000089983 
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
299 aa  139  4.999999999999999e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010515  Bcenmc03_4576  binding-protein-dependent transport systems inner membrane component  34.11 
 
 
314 aa  139  4.999999999999999e-32  Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.00748515 
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  32.45 
 
 
275 aa  139  4.999999999999999e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0201  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
294 aa  139  6e-32  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4568  binding-protein-dependent transport systems inner membrane component  28.03 
 
 
352 aa  139  7.999999999999999e-32  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1637  binding-protein-dependent transport systems inner membrane component  31.32 
 
 
303 aa  138  8.999999999999999e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0695484  n/a   
 
 
-
 
NC_013131  Caci_4985  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
313 aa  139  8.999999999999999e-32  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00226923  hitchhiker  0.00373728 
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  31.27 
 
 
287 aa  138  1e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_008543  Bcen2424_5659  binding-protein-dependent transport systems inner membrane component  34.64 
 
 
313 aa  138  1e-31  Burkholderia cenocepacia HI2424  Bacteria  normal  0.308138  normal  0.32687 
 
 
-
 
NC_013526  Tter_2496  binding-protein-dependent transport systems inner membrane component  30.66 
 
 
311 aa  138  1e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
292 aa  138  1e-31  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_07100  carbohydrate ABC transporter membrane protein  30.6 
 
 
318 aa  138  1e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.790586  normal 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  31.9 
 
 
294 aa  138  1e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_012669  Bcav_0911  binding-protein-dependent transport systems inner membrane component  31.64 
 
 
315 aa  137  2e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.488788  normal 
 
 
-
 
NC_007493  RSP_1443  ABC sugar transporter, inner membrane subunit  31.7 
 
 
303 aa  137  2e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0903613  n/a   
 
 
-
 
NC_013739  Cwoe_4453  binding-protein-dependent transport systems inner membrane component  34.91 
 
 
319 aa  138  2e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2465  binding-protein-dependent transport systems inner membrane component  30.98 
 
 
296 aa  137  2e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  0.603266  normal  0.170133 
 
 
-
 
NC_008061  Bcen_5200  binding-protein-dependent transport systems inner membrane component  34.11 
 
 
313 aa  137  3.0000000000000003e-31  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8465  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
315 aa  137  3.0000000000000003e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.511569  normal  0.0740219 
 
 
-
 
NC_010483  TRQ2_0115  binding-protein-dependent transport systems inner membrane component  29.58 
 
 
300 aa  136  4e-31  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  30.36 
 
 
299 aa  136  4e-31  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_009049  Rsph17029_0092  binding-protein-dependent transport systems inner membrane component  32.53 
 
 
296 aa  136  4e-31  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0117  binding-protein-dependent transport systems inner membrane component  29.58 
 
 
300 aa  136  4e-31  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2734  binding-protein-dependent transport systems inner membrane component  32.56 
 
 
308 aa  136  4e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.172129  normal  0.124427 
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
316 aa  136  4e-31  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  31.01 
 
 
314 aa  136  5e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  31.01 
 
 
314 aa  136  5e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3289  ABC glycerol-3-phosphate transporter, inner membrane subunit UgpA  31.14 
 
 
293 aa  136  5e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
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