More than 300 homologs were found in PanDaTox collection
for query gene Sros_5408 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_5408  carbohydrate ABC transporter membrane protein 1, CUT1 family  100 
 
 
305 aa  617  1e-176  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8465  binding-protein-dependent transport systems inner membrane component  59.86 
 
 
315 aa  352  4e-96  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.511569  normal  0.0740219 
 
 
-
 
NC_013131  Caci_3702  binding-protein-dependent transport systems inner membrane component  58 
 
 
327 aa  333  3e-90  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.042733  normal 
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  50.17 
 
 
309 aa  293  3e-78  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_012669  Bcav_0911  binding-protein-dependent transport systems inner membrane component  46.82 
 
 
315 aa  260  2e-68  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.488788  normal 
 
 
-
 
NC_013525  Tter_1094  binding-protein-dependent transport systems inner membrane component  45 
 
 
307 aa  249  3e-65  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_4694  binding-protein-dependent transport systems inner membrane component  47.65 
 
 
306 aa  240  2e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.626681 
 
 
-
 
NC_013530  Xcel_0064  binding-protein-dependent transport systems inner membrane component  46.28 
 
 
317 aa  240  2e-62  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27340  permease component of ABC-type sugar transporter  46.71 
 
 
319 aa  231  9e-60  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0174  binding-protein-dependent transport systems inner membrane component  35.54 
 
 
290 aa  186  5e-46  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.417375  n/a   
 
 
-
 
NC_010001  Cphy_3316  binding-protein-dependent transport systems inner membrane component  31.93 
 
 
298 aa  181  1e-44  Clostridium phytofermentans ISDg  Bacteria  normal  0.164411  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
298 aa  174  9.999999999999999e-43  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  37.06 
 
 
309 aa  173  2.9999999999999996e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  33.66 
 
 
315 aa  166  6.9999999999999995e-40  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  34.33 
 
 
283 aa  165  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  32.53 
 
 
313 aa  164  2.0000000000000002e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  32.75 
 
 
316 aa  164  3e-39  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  36.54 
 
 
317 aa  161  1e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_008786  Veis_1880  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
286 aa  160  2e-38  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.262739  normal  0.333569 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
309 aa  160  3e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
316 aa  160  4e-38  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_008254  Meso_3558  binding-protein-dependent transport systems inner membrane component  32.19 
 
 
295 aa  158  1e-37  Chelativorans sp. BNC1  Bacteria  normal  0.727517  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
300 aa  156  3e-37  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1752  binding-protein-dependent transport systems inner membrane component  33.65 
 
 
314 aa  156  4e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000089983 
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  33.69 
 
 
299 aa  155  6e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
318 aa  155  7e-37  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_012669  Bcav_3983  binding-protein-dependent transport systems inner membrane component  37.55 
 
 
302 aa  155  8e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.159905  normal 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  33 
 
 
306 aa  154  1e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  34.41 
 
 
299 aa  153  4e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_007802  Jann_2587  binding-protein-dependent transport systems inner membrane component  30.42 
 
 
314 aa  151  1e-35  Jannaschia sp. CCS1  Bacteria  decreased coverage  0.000137508  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  34.03 
 
 
306 aa  151  1e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0386  binding-protein-dependent transport systems inner membrane component  34.93 
 
 
304 aa  151  1e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.610758  normal  0.0357706 
 
 
-
 
NC_010001  Cphy_0593  binding-protein-dependent transport systems inner membrane component  30.64 
 
 
308 aa  151  1e-35  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000379306  n/a   
 
 
-
 
NC_013131  Caci_6903  binding-protein-dependent transport systems inner membrane component  34.28 
 
 
324 aa  150  2e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0156181  normal  0.0141251 
 
 
-
 
NC_008541  Arth_3142  binding-protein-dependent transport systems inner membrane component  31.03 
 
 
325 aa  150  2e-35  Arthrobacter sp. FB24  Bacteria  normal  0.406302  n/a   
 
 
-
 
NC_013172  Bfae_01820  permease component of ABC-type sugar transporter  32.48 
 
 
312 aa  150  2e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  30.39 
 
 
305 aa  150  2e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  29.03 
 
 
311 aa  150  3e-35  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009429  Rsph17025_3650  ABC-type sugar transport system periplasmic component-like protein  30.77 
 
 
315 aa  150  3e-35  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0685768 
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
299 aa  149  5e-35  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014211  Ndas_4929  binding-protein-dependent transport systems inner membrane component  34.97 
 
 
311 aa  149  7e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.155715  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  28.71 
 
 
306 aa  148  9e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  26.13 
 
 
315 aa  148  1.0000000000000001e-34  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3596  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
325 aa  148  1.0000000000000001e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.295531  normal 
 
 
-
 
NC_011886  Achl_3270  binding-protein-dependent transport systems inner membrane component  30.32 
 
 
321 aa  148  1.0000000000000001e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  34.23 
 
 
306 aa  147  2.0000000000000003e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2809  binding-protein-dependent transport systems inner membrane component  34.64 
 
 
279 aa  147  2.0000000000000003e-34  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.232459 
 
 
-
 
NC_011884  Cyan7425_0944  binding-protein-dependent transport systems inner membrane component  33.85 
 
 
290 aa  147  2.0000000000000003e-34  Cyanothece sp. PCC 7425  Bacteria  normal  0.120711  normal  0.307929 
 
 
-
 
NC_007488  RSP_3942  ABC sugar transporter, inner membrane subunit  31.16 
 
 
321 aa  147  3e-34  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.108149  n/a   
 
 
-
 
NC_008541  Arth_3385  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
313 aa  147  3e-34  Arthrobacter sp. FB24  Bacteria  normal  0.359427  n/a   
 
 
-
 
NC_011370  Rleg2_6091  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
292 aa  147  3e-34  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013744  Htur_4398  binding-protein-dependent transport systems inner membrane component  29.97 
 
 
314 aa  145  6e-34  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0144983  n/a   
 
 
-
 
NC_010003  Pmob_0524  binding-protein-dependent transport systems inner membrane component  34.26 
 
 
303 aa  145  6e-34  Petrotoga mobilis SJ95  Bacteria  normal  0.693678  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  30.7 
 
 
317 aa  145  7.0000000000000006e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1443  ABC sugar transporter, inner membrane subunit  32.75 
 
 
303 aa  145  1e-33  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0903613  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  32.87 
 
 
293 aa  144  1e-33  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
321 aa  145  1e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0753  binding-protein-dependent transport systems inner membrane component  33.01 
 
 
312 aa  144  2e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.308461  normal 
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  34.66 
 
 
294 aa  144  2e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  31.85 
 
 
321 aa  144  2e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0092  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
296 aa  144  2e-33  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4082  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
302 aa  143  3e-33  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2136  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
307 aa  143  3e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A4017  carbohydrate ABC transporter permease  30.74 
 
 
294 aa  143  3e-33  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  29.12 
 
 
292 aa  143  4e-33  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  32.44 
 
 
311 aa  143  4e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  30.88 
 
 
292 aa  142  6e-33  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_012880  Dd703_0699  binding-protein-dependent transport systems inner membrane component  30.39 
 
 
291 aa  142  6e-33  Dickeya dadantii Ech703  Bacteria  normal  0.216687  n/a   
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  32.29 
 
 
314 aa  142  6e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_009708  YpsIP31758_3574  carbohydrate ABC transporter permease  31.84 
 
 
294 aa  142  7e-33  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  30.34 
 
 
353 aa  142  7e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_010465  YPK_3708  binding-protein-dependent transport systems inner membrane component  31.84 
 
 
294 aa  142  7e-33  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  29.51 
 
 
288 aa  142  8e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_008541  Arth_3466  binding-protein-dependent transport systems inner membrane component  37.41 
 
 
342 aa  142  8e-33  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  28.37 
 
 
316 aa  141  9.999999999999999e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_010320  Teth514_1100  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
300 aa  141  9.999999999999999e-33  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  32.1 
 
 
306 aa  141  9.999999999999999e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
311 aa  141  9.999999999999999e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_013093  Amir_2984  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
305 aa  140  1.9999999999999998e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  30.33 
 
 
319 aa  140  1.9999999999999998e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  30.47 
 
 
287 aa  140  3e-32  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  29.77 
 
 
318 aa  140  3e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_012669  Bcav_3002  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
320 aa  139  4.999999999999999e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
324 aa  139  6e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
296 aa  139  7e-32  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  29.97 
 
 
318 aa  139  7e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011726  PCC8801_4236  binding-protein-dependent transport systems inner membrane component  31.89 
 
 
294 aa  139  7.999999999999999e-32  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4298  binding-protein-dependent transport systems inner membrane component  31.89 
 
 
294 aa  139  7.999999999999999e-32  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.200183 
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
319 aa  139  7.999999999999999e-32  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
316 aa  138  8.999999999999999e-32  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  31.07 
 
 
301 aa  138  1e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_008254  Meso_3772  binding-protein-dependent transport systems inner membrane component  28.67 
 
 
289 aa  138  1e-31  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  29.57 
 
 
300 aa  138  1e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
315 aa  138  1e-31  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_009523  RoseRS_2895  binding-protein-dependent transport systems inner membrane component  30.82 
 
 
316 aa  138  1e-31  Roseiflexus sp. RS-1  Bacteria  normal  0.0497455  normal 
 
 
-
 
NC_011371  Rleg2_6525  binding-protein-dependent transport systems inner membrane component  30.63 
 
 
286 aa  138  1e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.728774  normal  0.302995 
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  28.01 
 
 
295 aa  137  2e-31  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  29.26 
 
 
285 aa  137  2e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  31.01 
 
 
298 aa  137  2e-31  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  28.66 
 
 
307 aa  137  3.0000000000000003e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
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