Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3596 |
Symbol | |
ID | 8334949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4014491 |
End bp | 4015468 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644956739 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003114342 |
Protein GI | 256392778 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.295531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCCGA CCACACAGAA CCGGACGCGG CCCGTCCGGG GCGCGCGCGG GGCAGCCGCC CTGGCCGCGC GCCCCGGACG GGGGTCCCGT CCGCGCCCCG GCACGGCGAA CTGGGCAGGC TGGGCGTTCC TCGCCCCCGT CACGATCTAC CTGCTGGCCT TCTACGCCTA CCCGATGTAC CGCAACATCG AGCTGAGCCT GCACCACTAC ACGGTGCGCT CGTTCGTCCA CGGCGGCGCC CCGTTCACCG GCCTGGACAA CTATCGCAAG GTCCTGAGCG ACCCCGCCTT CCGCCCGGCG CTGATCCACA CGCTGGTGTT CACCGGCGCG TCGATCCTGT TCCAGTTCTG GATCGGCATG GGCCTGGCGG TGTTCTTCAG CCGGCACTTC CGGCTCTCGG CGACGCTGCG CGCGCTGTTC CTCGTGCCCT GGCTGCTGCC GCTGATCGTG TCGGCCTCGA CGTGGTCGTG GATGCTCAAC AGCGACTCCG GCGTCGTGAA CCACATGCTG CACGGCCTCG GGATCGCCCC GGTGGACTGG CTCACCTCGC CGAAGTGGTC GCTGGTGTCG GTGATCGTGG CGAACGTGTG GATCGGCATC CCGTTCAACC TGGTCATGCT CTACAGCGGG ATGCAGGCGG TCTCCCCGGA GCTGTACGAG GCGGCCGAGC TGGACGGCGC GACCGCGTGG CAGCGCTTCT GGAAGGTCAC CTTCCCGCTG CTGCGCCCGG TCGCCGCGAT CACGCTGCTG CTCGGGCTGG TCTACACGCT GAAGGTCTTC GACATCATCT GGATCATGAC CAAGGGGGGT CCGGCGGGCT CCTCGGCGAC CTTCGCGACC TGGTCCTACC AGCTGGGCTT CGGCAATCTG CTGCCGGAGT TCGGACCCGG CGCGGCGGTC GGCAACCTGC TGGTCGTGAT GGCACTGGCC TTCGGGCTGA TCTACATCCG GGCCCAGCGC AAGCAGCGGG AGGCGTGA
|
Protein sequence | MNPTTQNRTR PVRGARGAAA LAARPGRGSR PRPGTANWAG WAFLAPVTIY LLAFYAYPMY RNIELSLHHY TVRSFVHGGA PFTGLDNYRK VLSDPAFRPA LIHTLVFTGA SILFQFWIGM GLAVFFSRHF RLSATLRALF LVPWLLPLIV SASTWSWMLN SDSGVVNHML HGLGIAPVDW LTSPKWSLVS VIVANVWIGI PFNLVMLYSG MQAVSPELYE AAELDGATAW QRFWKVTFPL LRPVAAITLL LGLVYTLKVF DIIWIMTKGG PAGSSATFAT WSYQLGFGNL LPEFGPGAAV GNLLVVMALA FGLIYIRAQR KQREA
|
| |