Gene RSP_3942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3942 
SymbolyurN 
ID3712061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007488 
Strand
Start bp109368 
End bp110333 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content65% 
IMG OID640069396 
ProductABC sugar transporter, inner membrane subunit 
Protein accessionYP_345263 
Protein GI77404689 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.108149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTGT CCGCGGACAT CGGAAAGAGC GGGGTCGCCC TCAGCGGCCC CGCCCACGGG 
GCAGGGAGGG GGCCGCGGCT GCGCCCCCTC CTCTCCCGGC TGCTGGCGCT GCGCTGGATC
GTCGTGGCGC TCGTCCTTGT GGGCTGGTTC GTCTATTACC CGATCGTCAA CAACTTCTTC
GTCAGCACCA CGAACCAGGA CATCTTCACC GGCGAGGTGA CGCAGGTCGG GCTCGACAAT
TACCGCAGGC TCACGCAGGA CCCGGTGGTG GGCCGCGCGC TCTGGAACAA CGGCGCCTAT
GCGGTGCTCT CCATCCTCTT CCAGGTCTTC GCGGCCTTCT GCCTCGCCGC CATCGTCGAG
GGCCTGTCCT CGGAACGCTG GCGCAACTTC TGGCGGGCGC TCTATTTCGT GCCCTCGGCC
ATCTCGACGA CCGTCACCGG GCTCCTCTTC TATTTCATCT ATCAGCCCGA CATCGGCATC
CTCGACGGGC TGCTGAAGGC CCTGAACCTG CAGGAATGGT CGCATGTCTG GCTCGGCGAT
CCGCGGACGG CGATCTATGC CATCATCGCC ATGAGCCAGT GGCAGGGCTT CGGCTATTCG
ACGCTCCTCT TCACCATCGC GATCCAGAAG ATCCCGCAGG AGCTTTACGA CGCGGCGCGG
ATGGACGGGG CGGGCCCGCT CCGCCAGCTC TGGAGCATCA CCTTCCCCCT CACGCGCGAG
ATGACCGGCA TGATGATCAT CGTGACCGTG ACCGGCGCCT TTCAGGTCTT CAACGAGGTC
ATGGTCATGA CCGGCGGCGG GCCGAACAAT TCGAGCCAGG TGCTGGGCAC ATGGCTCTAC
GAGCAGGGCT TCAACCAGAA CGACATGGGC TATGCCGCGG CCATCGGTTC GGTCGTCTTC
GCGGTGACGA TGCTCACGGG CATCCTGCAG CTCTGGTACA CCCGGCGGCG GAGGGTCCTC
GCATGA
 
Protein sequence
MSLSADIGKS GVALSGPAHG AGRGPRLRPL LSRLLALRWI VVALVLVGWF VYYPIVNNFF 
VSTTNQDIFT GEVTQVGLDN YRRLTQDPVV GRALWNNGAY AVLSILFQVF AAFCLAAIVE
GLSSERWRNF WRALYFVPSA ISTTVTGLLF YFIYQPDIGI LDGLLKALNL QEWSHVWLGD
PRTAIYAIIA MSQWQGFGYS TLLFTIAIQK IPQELYDAAR MDGAGPLRQL WSITFPLTRE
MTGMMIIVTV TGAFQVFNEV MVMTGGGPNN SSQVLGTWLY EQGFNQNDMG YAAAIGSVVF
AVTMLTGILQ LWYTRRRRVL A