| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5529 |
|---|
| Symbol | |
|---|
| ID | 8668823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 6048016 |
|---|
| End bp | 6048933 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003341026 |
|---|
| Protein GI | 271966830 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.277323 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.201918 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCGC GGCTGCGCGC GTTCGGCTTC GTCGCCGGGT CCCTCGCGGT ACCGGTGGTC
CTCTACGTGG CCTTCGTGAT CAATCCGTAC GTCCAGGCGT TCCAGATCGC GCTGACCGAC
TGGCGGGGGG TGTCGCGCAC CCCCGGGTTC GTCGGGCTGG AGAACTTCGC CCGTCTCTGG
GACGACCAGG TGTTCTGGCA GGCTCTGCGC AATCACGGCG TGCTGCTGGT CACGCTCCCC
CTGGTCACGA TCGCCCTCGC GCTGTTCTTC GCCTACCTGC TCAACCTGGG CGGAGGCGGC
GCGAGCGGGA AGATGCGCGG GGTGCGGGGC GCGGGGTTCT ACCGGGTGGT GTTCTTCCTC
CCCCAGGTCC TCGCCGTCGC CGTCGTCGGC GTGCTGTTCA AGGCGGTCTA CCGGCCCGAC
GAGAGCGGCG TCCTCAACAG CGCCCTGGCC GGTCTCGGCC TGGAGCCCGT CGGCTGGCTC
ACCGAGCCCA GGCTCGCCTT CTGGTCGATC ATCGCGGTCA TGGTCTGGCA GGCGGTCGGC
TTCTACGTCG TGCTGTTCTC CGCCGGCATG GCCGCGATCC CCAAGGACGT CTTCGAGGCG
GCGGCGCTGG ACGGCGCGGG CCGGGTGCGG ATGTTCCTGT CCATCACCCT GCCTCTGCTC
TGGGACACCG TGCAGGTCGG CTGGGTCTAC CTCGGCATCG CCGCCTTCGA CGGCTTCGCG
CTGGTGCAGG TGCTCTCGGT CGACCGCGGC GGCCCGGACG GCGCCACCAC CGTGCTTCCC
CTGGAGATCT GGAAGACGGC CTTCAGCTAC TCGAAGTTCG GCTACGCCTC GGCGATGGGC
GTGGCGCTGT TCTTCATGAC CATCACGTTC GCGGCGCTGA CCCTGCGGGT CACCCGTCGC
GAGAGGATCG AGTTCTGA
|
|---|
| Protein sequence | MSARLRAFGF VAGSLAVPVV LYVAFVINPY VQAFQIALTD WRGVSRTPGF VGLENFARLW
DDQVFWQALR NHGVLLVTLP LVTIALALFF AYLLNLGGGG ASGKMRGVRG AGFYRVVFFL
PQVLAVAVVG VLFKAVYRPD ESGVLNSALA GLGLEPVGWL TEPRLAFWSI IAVMVWQAVG
FYVVLFSAGM AAIPKDVFEA AALDGAGRVR MFLSITLPLL WDTVQVGWVY LGIAAFDGFA
LVQVLSVDRG GPDGATTVLP LEIWKTAFSY SKFGYASAMG VALFFMTITF AALTLRVTRR
ERIEF
|
|---|
| |