| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1940 |
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| Symbol | |
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| ID | 8333283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2195143 |
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| End bp | 2196090 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644955089 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003112701 |
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| Protein GI | 256391137 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.141616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.430519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTGC GCAAGAAGAC CAGAGAGCGG CTGTTCATCG CCTCGTTCCT CGCGGGGCCG
CTCGCGGTCT ATTTGATCTT CGTCATCTGG CCCTACGTCG AGACCTTCGG CTACTCCCTG
ACCGAATGGA GCGGCGTCGC GCCGCCGAGC AAGGTCGTCG GCCTGAAGAA CTACGCGGAC
CTGTTCCACG ACTCGATCTT CCTCAAGGCC CTGACGCACA ACATGATCAT CCTGATCGTG
TTCCCGACGA TCACCATCGT CCTGGCGATG TTCTTCGCCT TCATGCTGAA CGTCGGCGGG
CGCCGCGGCG GCCTGGGCGG GGTGCGGGGC ATCGGAGGCT CGGCGTTCTT CCGGATCGTC
TTCTTCTTCC CGCAGGTCCT GTCGGTCGCG ATCATCGTGA TCCTGTTCCA GGCCGCCTAT
GAGTCCAACA GCGTCGGGCT GTTCAACGCG ATCGTCATCA AACTGGGGCT CACAGACGCG
AACCACCCGT GGGAGTTCCT GAACTCCCCC ACGTTCGTCC TGTGGTGCAT CATGTTCATC
CTGGTCTGGC AGTGGGTCGG CTTCTACCTG GTCCTGTTCT CCGCCGCGAT GCAGCAGATC
CCGCGGGACT ACTACGAGGC GGCGCTGCTG GACGGCGCCG GGCGCACCCA GACCTACTTC
AAGGTCACGA TGCCCCTGCT GTGGGACTCG GTGCAGACCG CCTGGGTGTA TCTGGCGGTC
GCCGCGATGG ACGCCTTCGC CCTGGTGGCC ACCCTGACCC CCGGCTCCAG CTTCGGCGGC
GGCCCGGACG AGCACGGCGA GGTCCTGGCG ACCTACCTGA TGCGCAACTT CCAGGTCCTG
GGCAAGGCCG GCTACGCCTG CGCGATGGGC GTCGTCATCT TCTTCATCAC CCTGATCCTT
TCGCTCGTCG TCATGCGCCT GACGCGCCGC GAGCGCCTCG AGTACTGA
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| Protein sequence | MRLRKKTRER LFIASFLAGP LAVYLIFVIW PYVETFGYSL TEWSGVAPPS KVVGLKNYAD
LFHDSIFLKA LTHNMIILIV FPTITIVLAM FFAFMLNVGG RRGGLGGVRG IGGSAFFRIV
FFFPQVLSVA IIVILFQAAY ESNSVGLFNA IVIKLGLTDA NHPWEFLNSP TFVLWCIMFI
LVWQWVGFYL VLFSAAMQQI PRDYYEAALL DGAGRTQTYF KVTMPLLWDS VQTAWVYLAV
AAMDAFALVA TLTPGSSFGG GPDEHGEVLA TYLMRNFQVL GKAGYACAMG VVIFFITLIL
SLVVMRLTRR ERLEY
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