More than 300 homologs were found in PanDaTox collection
for query gene Cphy_0574 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_0574  binding-protein-dependent transport systems inner membrane component  100 
 
 
296 aa  588  1e-167  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2103  ABC transporter, permease protein  67.69 
 
 
296 aa  405  1.0000000000000001e-112  Bacillus cereus AH187  Bacteria  normal  0.512676  n/a   
 
 
-
 
NC_013515  Smon_0144  binding-protein-dependent transport systems inner membrane component  63.73 
 
 
295 aa  388  1e-107  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013171  Apre_1667  binding-protein-dependent transport systems inner membrane component  56.08 
 
 
296 aa  347  1e-94  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.227806  n/a   
 
 
-
 
NC_008261  CPF_0557  ABC transporter, permease protein  42.71 
 
 
308 aa  275  5e-73  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0541  ABC transporter, permease protein  42.71 
 
 
308 aa  275  8e-73  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5529  binding-protein-dependent transport systems inner membrane component  34.45 
 
 
305 aa  200  3e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.277323  normal  0.201918 
 
 
-
 
NC_013595  Sros_7706  sugar ABC transporter permease protein  32.03 
 
 
303 aa  188  9e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.680022 
 
 
-
 
NC_011899  Hore_13130  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
293 aa  172  6.999999999999999e-42  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1940  binding-protein-dependent transport systems inner membrane component  31.83 
 
 
315 aa  168  1e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.141616  normal  0.430519 
 
 
-
 
NC_012034  Athe_0615  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
296 aa  162  8.000000000000001e-39  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
328 aa  162  9e-39  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_013947  Snas_2856  binding-protein-dependent transport systems inner membrane component  30.32 
 
 
327 aa  160  2e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.752891 
 
 
-
 
NC_010001  Cphy_1530  binding-protein-dependent transport systems inner membrane component  34.56 
 
 
295 aa  160  3e-38  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
299 aa  159  5e-38  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
295 aa  157  2e-37  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1686  binding-protein-dependent transport systems inner membrane component  31.32 
 
 
312 aa  156  4e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.746865  normal 
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  31.45 
 
 
310 aa  155  5.0000000000000005e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_007333  Tfu_0935  multiple sugar transport system permease protein  31.82 
 
 
328 aa  154  1e-36  Thermobifida fusca YX  Bacteria  normal  0.36894  n/a   
 
 
-
 
NC_012850  Rleg_1867  binding-protein-dependent transport systems inner membrane component  30.96 
 
 
312 aa  154  2e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1134  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
300 aa  154  2e-36  Clostridium cellulolyticum H10  Bacteria  normal  0.454536  n/a   
 
 
-
 
NC_013526  Tter_2658  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
309 aa  154  2e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.43514  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  32.58 
 
 
319 aa  153  2.9999999999999998e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  32.94 
 
 
291 aa  153  4e-36  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013739  Cwoe_4453  binding-protein-dependent transport systems inner membrane component  30.25 
 
 
319 aa  152  5e-36  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2048  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
300 aa  152  7e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.587405  normal 
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
299 aa  152  8e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_013739  Cwoe_5440  binding-protein-dependent transport systems inner membrane component  29.89 
 
 
329 aa  151  1e-35  Conexibacter woesei DSM 14684  Bacteria  normal  0.811614  normal 
 
 
-
 
NC_014248  Aazo_4983  binding-protein-dependent transporter inner membrane protein  34.01 
 
 
310 aa  151  1e-35  'Nostoc azollae' 0708  Bacteria  normal  0.300856  n/a   
 
 
-
 
NC_009636  Smed_2949  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
302 aa  151  1e-35  Sinorhizobium medicae WSM419  Bacteria  normal  0.261022  normal 
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
290 aa  152  1e-35  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_013595  Sros_0295  ABC-type sugar transport system periplasmic component-like protein  30.82 
 
 
300 aa  150  2e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  34.39 
 
 
306 aa  149  7e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  31 
 
 
299 aa  148  1.0000000000000001e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  29.75 
 
 
307 aa  147  2.0000000000000003e-34  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  29.75 
 
 
307 aa  147  2.0000000000000003e-34  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_013525  Tter_1290  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
297 aa  147  2.0000000000000003e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  31.34 
 
 
309 aa  146  4.0000000000000006e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_1026  binding-protein-dependent transport systems inner membrane component  29.33 
 
 
300 aa  146  4.0000000000000006e-34  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0038089  n/a   
 
 
-
 
NC_013411  GYMC61_2715  binding-protein-dependent transport systems inner membrane component  34.16 
 
 
289 aa  146  4.0000000000000006e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  28.82 
 
 
311 aa  145  6e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  31.6 
 
 
310 aa  145  6e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0627  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
294 aa  145  6e-34  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000558297  n/a   
 
 
-
 
NC_009485  BBta_3986  putative ABC transporter (permease protein)  31.58 
 
 
313 aa  145  9e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  34.03 
 
 
300 aa  145  1e-33  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  28.52 
 
 
330 aa  144  1e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_008010  Dgeo_2695  binding-protein-dependent transport systems inner membrane component  30.11 
 
 
309 aa  144  2e-33  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.179346  n/a   
 
 
-
 
NC_010320  Teth514_0754  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
324 aa  144  2e-33  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000204062  n/a   
 
 
-
 
NC_009654  Mmwyl1_2009  binding-protein-dependent transport systems inner membrane component  31.41 
 
 
291 aa  143  3e-33  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  33.7 
 
 
299 aa  143  3e-33  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_013525  Tter_0428  binding-protein-dependent transport systems inner membrane component  31.03 
 
 
310 aa  143  3e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
320 aa  143  4e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  31.16 
 
 
293 aa  142  8e-33  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  29.53 
 
 
300 aa  142  9e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_3408  binding-protein-dependent transport systems inner membrane component  32.19 
 
 
293 aa  142  9e-33  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00259426  n/a   
 
 
-
 
NC_011898  Ccel_0999  binding-protein-dependent transport systems inner membrane component  30.95 
 
 
294 aa  141  9.999999999999999e-33  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3565  binding-protein-dependent transport systems inner membrane component  30.14 
 
 
316 aa  141  9.999999999999999e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.702273  normal  0.0136241 
 
 
-
 
NC_013161  Cyan8802_4298  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
294 aa  141  9.999999999999999e-33  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.200183 
 
 
-
 
NC_011726  PCC8801_4236  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
294 aa  141  9.999999999999999e-33  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  31.11 
 
 
287 aa  141  1.9999999999999998e-32  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_3206  binding-protein-dependent transport systems inner membrane component  29.17 
 
 
313 aa  140  3e-32  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.409377 
 
 
-
 
NC_007413  Ava_4638  binding-protein dependent transport system inner membrane protein  35.36 
 
 
308 aa  139  4.999999999999999e-32  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000000461706  normal  0.23331 
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  29.08 
 
 
311 aa  139  4.999999999999999e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_013526  Tter_2645  binding-protein-dependent transport systems inner membrane component  32.53 
 
 
311 aa  139  6e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_11550  carbohydrate ABC transporter membrane protein  29.08 
 
 
354 aa  138  7.999999999999999e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal  0.0144146 
 
 
-
 
NC_013093  Amir_2984  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
305 aa  138  8.999999999999999e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_23840  carbohydrate ABC transporter membrane protein  29.93 
 
 
325 aa  138  1e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  30.6 
 
 
311 aa  138  1e-31  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_00850  carbohydrate ABC transporter membrane protein  29.43 
 
 
320 aa  138  1e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_01490  carbohydrate ABC transporter membrane protein  31.6 
 
 
324 aa  138  1e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  0.659857  n/a   
 
 
-
 
NC_011881  Achl_4613  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
301 aa  138  1e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  28.77 
 
 
321 aa  137  2e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  29.12 
 
 
300 aa  137  2e-31  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1092  binding-protein-dependent transport systems inner membrane component  29.81 
 
 
291 aa  137  2e-31  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0116  binding-protein-dependent transport systems inner membrane component  29.49 
 
 
317 aa  137  3.0000000000000003e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.156333  normal  0.563407 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  30.26 
 
 
305 aa  137  3.0000000000000003e-31  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3995  binding-protein-dependent transport systems inner membrane component  31.16 
 
 
308 aa  137  3.0000000000000003e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.229892  normal  0.901532 
 
 
-
 
NC_008709  Ping_2010  ABC transporter substrate binding inner membrane protein  32.58 
 
 
318 aa  136  4e-31  Psychromonas ingrahamii 37  Bacteria  normal  0.360583  normal 
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  29.23 
 
 
306 aa  136  4e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  29.73 
 
 
309 aa  136  4e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013745  Htur_4489  binding-protein-dependent transport systems inner membrane component  28.52 
 
 
308 aa  136  5e-31  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.283214  n/a   
 
 
-
 
NC_011898  Ccel_0201  binding-protein-dependent transport systems inner membrane component  31.77 
 
 
294 aa  135  6.0000000000000005e-31  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1709  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
325 aa  135  8e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.122919  normal 
 
 
-
 
NC_009380  Strop_2982  binding-protein-dependent transport systems inner membrane component  28.85 
 
 
313 aa  135  8e-31  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0523048 
 
 
-
 
NC_009664  Krad_0295  binding-protein-dependent transport systems inner membrane component  31.5 
 
 
306 aa  135  8e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0472746 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  32.38 
 
 
305 aa  135  8e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2875  binding-protein-dependent transport systems inner membrane component  28.62 
 
 
318 aa  134  9.999999999999999e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal  0.0272583 
 
 
-
 
NC_013595  Sros_7172  sugar transport system (permease)  31.93 
 
 
323 aa  134  9.999999999999999e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0377247 
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  34.77 
 
 
311 aa  134  9.999999999999999e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_2895  binding-protein-dependent transport systems inner membrane component  29.61 
 
 
316 aa  135  9.999999999999999e-31  Roseiflexus sp. RS-1  Bacteria  normal  0.0497455  normal 
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  30.14 
 
 
287 aa  135  9.999999999999999e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_010816  BLD_1875  MalF-type ABC sugar transport systems permease component  30.14 
 
 
350 aa  134  9.999999999999999e-31  Bifidobacterium longum DJO10A  Bacteria  normal  0.0432685  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1183  ABC transporter, permease protein  29.96 
 
 
307 aa  134  1.9999999999999998e-30  Burkholderia pseudomallei 1710b  Bacteria  normal  0.101432  n/a   
 
 
-
 
NC_012669  Bcav_3622  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
309 aa  134  1.9999999999999998e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.049937  normal  0.069127 
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  27.97 
 
 
320 aa  134  1.9999999999999998e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2817  putative carbohydrate ABC transporter, permease protein  29.96 
 
 
307 aa  134  1.9999999999999998e-30  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0362  binding-protein-dependent transport systems inner membrane component  32.27 
 
 
312 aa  134  1.9999999999999998e-30  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.541424  n/a   
 
 
-
 
NC_013131  Caci_5026  binding-protein-dependent transport systems inner membrane component  27.99 
 
 
296 aa  134  1.9999999999999998e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0515819  normal  0.562108 
 
 
-
 
NC_008010  Dgeo_2725  binding-protein-dependent transport systems inner membrane component  28.76 
 
 
315 aa  133  3e-30  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.104995  n/a   
 
 
-
 
NC_012669  Bcav_0941  binding-protein-dependent transport systems inner membrane component  29.52 
 
 
313 aa  134  3e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.737632 
 
 
-
 
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