Gene Sare_3206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3206 
Symbol 
ID5705537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3696308 
End bp3697249 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content64% 
IMG OID641272637 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001538004 
Protein GI159038751 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.409377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCATG GTGTCGCGCG TTTCGTCACG GGCTTCTTGG CCCTGCCGGT CGCGATCTAC 
CTCTTCTACG TGGTCTGGCC CTTCGCTCAG GCCGCTGGTT ACTCGTTGAC CGACTGGGGT
GGCTACTCCG ATCGGCAGCA GTTCGTCGGG CTGGACAACT ACATCCGGCT GTTCTCCGAC
GAGCTGATCA GGAAAGCCTT CTGGCACAAC GTGTTCTTCC TGGTCACCGT GCCGCTGTTC
ACGATCGCGC TGGCTCTGTT CCTTGCGTTC CTGCTCAACG TGGGCGGACG CGAGGACAGA
GCCGGTATCC GGGGCGTCTT CGGCTCCAGC GTCTACAAGA TCATTTTCTT CTTCCCGCAG
GTGCTGTCCC TGGTCGTTGT CGCCGTCATG TGGCAGCAGA TCTACCGGGC CGACGGGCAG
GGCCTGATCA ACGGCGTGCT GATGAAGGTC GGGCTGGTTG ATCCGGACAA CCCGATCGCG
TTCACCAACG ACCCGGAACC CTTCCTCGGT GTCCCCGCGG TGCTGTGGTG GCTGCTGCTG
ATCGCGGTCT GGAGCGGAGC CGGGTTCTAT ATGGTGTTGT TCTCCGCGGC GATGCAGTCG
ATCCCGAAGG ACGTCTACGA GGCGGCCATC CTCGACGGCG CCGGTCGGTT CCACACCTTC
TTCCGGATCA CGCTGCCGCT GCTGCGCGAG ACCGTCTCGG TCGCCTGGGT CTACCTGGGC
TTCATCGCCC TGGACATGTA TGCCCTGGTG TTCGTGATGA CACCCAGCCA GGGCGGCCCG
AACCACGCCA GCGAGATCTT CGCGTCGGTG CTCAACTTCA CCGCGTTCCA GAAGGGCCAG
TTCGGCTACG CCTGCGCGAT GGGCGTGGCG CTGGCGATCT TCACGATCCT GTTGGCCGCG
GCGCAGCTGA GGATCACCCG CCGCGAGCGG ATCGAATACT GA
 
Protein sequence
MRHGVARFVT GFLALPVAIY LFYVVWPFAQ AAGYSLTDWG GYSDRQQFVG LDNYIRLFSD 
ELIRKAFWHN VFFLVTVPLF TIALALFLAF LLNVGGREDR AGIRGVFGSS VYKIIFFFPQ
VLSLVVVAVM WQQIYRADGQ GLINGVLMKV GLVDPDNPIA FTNDPEPFLG VPAVLWWLLL
IAVWSGAGFY MVLFSAAMQS IPKDVYEAAI LDGAGRFHTF FRITLPLLRE TVSVAWVYLG
FIALDMYALV FVMTPSQGGP NHASEIFASV LNFTAFQKGQ FGYACAMGVA LAIFTILLAA
AQLRITRRER IEY