Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3206 |
Symbol | |
ID | 5705537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3696308 |
End bp | 3697249 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641272637 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001538004 |
Protein GI | 159038751 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.409377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCATG GTGTCGCGCG TTTCGTCACG GGCTTCTTGG CCCTGCCGGT CGCGATCTAC CTCTTCTACG TGGTCTGGCC CTTCGCTCAG GCCGCTGGTT ACTCGTTGAC CGACTGGGGT GGCTACTCCG ATCGGCAGCA GTTCGTCGGG CTGGACAACT ACATCCGGCT GTTCTCCGAC GAGCTGATCA GGAAAGCCTT CTGGCACAAC GTGTTCTTCC TGGTCACCGT GCCGCTGTTC ACGATCGCGC TGGCTCTGTT CCTTGCGTTC CTGCTCAACG TGGGCGGACG CGAGGACAGA GCCGGTATCC GGGGCGTCTT CGGCTCCAGC GTCTACAAGA TCATTTTCTT CTTCCCGCAG GTGCTGTCCC TGGTCGTTGT CGCCGTCATG TGGCAGCAGA TCTACCGGGC CGACGGGCAG GGCCTGATCA ACGGCGTGCT GATGAAGGTC GGGCTGGTTG ATCCGGACAA CCCGATCGCG TTCACCAACG ACCCGGAACC CTTCCTCGGT GTCCCCGCGG TGCTGTGGTG GCTGCTGCTG ATCGCGGTCT GGAGCGGAGC CGGGTTCTAT ATGGTGTTGT TCTCCGCGGC GATGCAGTCG ATCCCGAAGG ACGTCTACGA GGCGGCCATC CTCGACGGCG CCGGTCGGTT CCACACCTTC TTCCGGATCA CGCTGCCGCT GCTGCGCGAG ACCGTCTCGG TCGCCTGGGT CTACCTGGGC TTCATCGCCC TGGACATGTA TGCCCTGGTG TTCGTGATGA CACCCAGCCA GGGCGGCCCG AACCACGCCA GCGAGATCTT CGCGTCGGTG CTCAACTTCA CCGCGTTCCA GAAGGGCCAG TTCGGCTACG CCTGCGCGAT GGGCGTGGCG CTGGCGATCT TCACGATCCT GTTGGCCGCG GCGCAGCTGA GGATCACCCG CCGCGAGCGG ATCGAATACT GA
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Protein sequence | MRHGVARFVT GFLALPVAIY LFYVVWPFAQ AAGYSLTDWG GYSDRQQFVG LDNYIRLFSD ELIRKAFWHN VFFLVTVPLF TIALALFLAF LLNVGGREDR AGIRGVFGSS VYKIIFFFPQ VLSLVVVAVM WQQIYRADGQ GLINGVLMKV GLVDPDNPIA FTNDPEPFLG VPAVLWWLLL IAVWSGAGFY MVLFSAAMQS IPKDVYEAAI LDGAGRFHTF FRITLPLLRE TVSVAWVYLG FIALDMYALV FVMTPSQGGP NHASEIFASV LNFTAFQKGQ FGYACAMGVA LAIFTILLAA AQLRITRRER IEY
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