More than 300 homologs were found in PanDaTox collection
for query gene Snas_2856 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_2856  binding-protein-dependent transport systems inner membrane component  100 
 
 
327 aa  647    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.752891 
 
 
-
 
NC_009953  Sare_3206  binding-protein-dependent transport systems inner membrane component  47.3 
 
 
313 aa  238  6.999999999999999e-62  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.409377 
 
 
-
 
NC_013131  Caci_1940  binding-protein-dependent transport systems inner membrane component  43.4 
 
 
315 aa  236  5.0000000000000005e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.141616  normal  0.430519 
 
 
-
 
NC_013595  Sros_7706  sugar ABC transporter permease protein  40.98 
 
 
303 aa  232  6e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.680022 
 
 
-
 
NC_009380  Strop_2982  binding-protein-dependent transport systems inner membrane component  46.5 
 
 
313 aa  230  3e-59  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0523048 
 
 
-
 
NC_013595  Sros_5529  binding-protein-dependent transport systems inner membrane component  41.61 
 
 
305 aa  226  4e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.277323  normal  0.201918 
 
 
-
 
NC_013595  Sros_2048  binding-protein-dependent transport systems inner membrane component  42.11 
 
 
300 aa  192  5e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.587405  normal 
 
 
-
 
NC_013172  Bfae_23840  carbohydrate ABC transporter membrane protein  36.25 
 
 
325 aa  182  1e-44  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3995  binding-protein-dependent transport systems inner membrane component  41.3 
 
 
308 aa  175  9.999999999999999e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.229892  normal  0.901532 
 
 
-
 
NC_013515  Smon_0144  binding-protein-dependent transport systems inner membrane component  33.55 
 
 
295 aa  162  5.0000000000000005e-39  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_0574  binding-protein-dependent transport systems inner membrane component  30.32 
 
 
296 aa  160  3e-38  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2103  ABC transporter, permease protein  30.67 
 
 
296 aa  154  2.9999999999999998e-36  Bacillus cereus AH187  Bacteria  normal  0.512676  n/a   
 
 
-
 
NC_012034  Athe_0615  binding-protein-dependent transport systems inner membrane component  31.09 
 
 
296 aa  148  2.0000000000000003e-34  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1667  binding-protein-dependent transport systems inner membrane component  29.87 
 
 
296 aa  143  3e-33  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.227806  n/a   
 
 
-
 
NC_008010  Dgeo_2695  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
309 aa  139  6e-32  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.179346  n/a   
 
 
-
 
NC_008261  CPF_0557  ABC transporter, permease protein  30.49 
 
 
308 aa  138  1e-31  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0541  ABC transporter, permease protein  30.49 
 
 
308 aa  138  2e-31  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2392  binding-protein-dependent transport systems inner membrane component  31.34 
 
 
318 aa  135  8e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  0.488692  normal 
 
 
-
 
NC_013739  Cwoe_4453  binding-protein-dependent transport systems inner membrane component  33.96 
 
 
319 aa  134  3e-30  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_0239  binding-protein-dependent transport systems inner membrane component  30.1 
 
 
288 aa  132  6e-30  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2071  binding-protein-dependent transport systems inner membrane component  30.34 
 
 
345 aa  130  4.0000000000000003e-29  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.0000672298  normal 
 
 
-
 
NC_007802  Jann_2587  binding-protein-dependent transport systems inner membrane component  32 
 
 
314 aa  130  4.0000000000000003e-29  Jannaschia sp. CCS1  Bacteria  decreased coverage  0.000137508  normal 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
295 aa  128  1.0000000000000001e-28  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6970  binding-protein-dependent transport systems inner membrane component  29.71 
 
 
305 aa  128  1.0000000000000001e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0388505  normal 
 
 
-
 
NC_011899  Hore_13130  binding-protein-dependent transport systems inner membrane component  28.2 
 
 
293 aa  127  2.0000000000000002e-28  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  29.84 
 
 
299 aa  128  2.0000000000000002e-28  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  28.35 
 
 
309 aa  127  3e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009667  Oant_2484  binding-protein-dependent transport systems inner membrane component  31.76 
 
 
318 aa  126  6e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.575298  n/a   
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  31.44 
 
 
290 aa  123  5e-27  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_009718  Fnod_0627  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
294 aa  122  6e-27  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000558297  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  30.46 
 
 
319 aa  122  7e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0068  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
315 aa  121  9.999999999999999e-27  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  28.88 
 
 
318 aa  119  7e-26  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_013739  Cwoe_5440  binding-protein-dependent transport systems inner membrane component  29.62 
 
 
329 aa  119  7.999999999999999e-26  Conexibacter woesei DSM 14684  Bacteria  normal  0.811614  normal 
 
 
-
 
NC_009616  Tmel_0819  binding-protein-dependent transport systems inner membrane component  30 
 
 
306 aa  118  1.9999999999999998e-25  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_1114  sugar ABC transporter, permease protein  32.12 
 
 
301 aa  117  3e-25  Clostridium perfringens ATCC 13124  Bacteria  normal  0.212611  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  32.01 
 
 
292 aa  117  3e-25  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013411  GYMC61_2958  binding-protein-dependent transport systems inner membrane component  31.84 
 
 
435 aa  117  3e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0207  binding-protein-dependent transport systems inner membrane component  30.41 
 
 
335 aa  117  3e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_0883  binding-protein-dependent transport systems inner membrane component  28.98 
 
 
302 aa  116  3.9999999999999997e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.634184 
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  29.47 
 
 
299 aa  116  5e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_010483  TRQ2_0115  binding-protein-dependent transport systems inner membrane component  28.42 
 
 
300 aa  116  5e-25  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0117  binding-protein-dependent transport systems inner membrane component  28.42 
 
 
300 aa  116  5e-25  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  26.3 
 
 
309 aa  116  6e-25  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
283 aa  116  6.9999999999999995e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_0201  binding-protein-dependent transport systems inner membrane component  31.27 
 
 
294 aa  116  6.9999999999999995e-25  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_00850  carbohydrate ABC transporter membrane protein  31.21 
 
 
320 aa  115  1.0000000000000001e-24  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1134  binding-protein-dependent transport systems inner membrane component  27.3 
 
 
300 aa  114  3e-24  Clostridium cellulolyticum H10  Bacteria  normal  0.454536  n/a   
 
 
-
 
NC_008786  Veis_0945  binding-protein-dependent transport systems inner membrane component  30.36 
 
 
309 aa  114  3e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  31.48 
 
 
310 aa  114  3e-24  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1530  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
295 aa  113  3e-24  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  29.57 
 
 
299 aa  113  4.0000000000000004e-24  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_013526  Tter_2658  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
309 aa  113  5e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.43514  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  26.09 
 
 
300 aa  113  5e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_3408  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
293 aa  113  5e-24  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00259426  n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  31.8 
 
 
307 aa  112  7.000000000000001e-24  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
307 aa  112  7.000000000000001e-24  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  27.8 
 
 
308 aa  112  8.000000000000001e-24  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1026  binding-protein-dependent transport systems inner membrane component  29.56 
 
 
300 aa  112  1.0000000000000001e-23  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0038089  n/a   
 
 
-
 
NC_012669  Bcav_1656  binding-protein-dependent transport systems inner membrane component  28.71 
 
 
318 aa  112  1.0000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.152531  normal  0.26367 
 
 
-
 
NC_013411  GYMC61_2715  binding-protein-dependent transport systems inner membrane component  31.18 
 
 
289 aa  111  2.0000000000000002e-23  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  30.49 
 
 
295 aa  111  2.0000000000000002e-23  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_011898  Ccel_2996  binding-protein-dependent transport systems inner membrane component  28.25 
 
 
295 aa  111  2.0000000000000002e-23  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000237295  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  29.69 
 
 
316 aa  111  2.0000000000000002e-23  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0428  binding-protein-dependent transport systems inner membrane component  30.07 
 
 
310 aa  111  2.0000000000000002e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_4034  binding-protein-dependent transport systems inner membrane component  29.32 
 
 
303 aa  111  2.0000000000000002e-23  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_15070  permease component of ABC-type sugar transporter  30.04 
 
 
311 aa  110  2.0000000000000002e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0771026  normal 
 
 
-
 
NC_014212  Mesil_1016  binding-protein-dependent transport systems inner membrane component  29.93 
 
 
301 aa  111  2.0000000000000002e-23  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1807  binding-protein-dependent transport systems inner membrane component  26.62 
 
 
295 aa  110  4.0000000000000004e-23  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  31.52 
 
 
299 aa  110  4.0000000000000004e-23  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_012669  Bcav_3942  binding-protein-dependent transport systems inner membrane component  30.54 
 
 
322 aa  110  5e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.300337 
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  29.93 
 
 
328 aa  109  6e-23  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  27.05 
 
 
311 aa  109  6e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  29.38 
 
 
321 aa  109  6e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1923  binding-protein-dependent transport systems inner membrane component  27.27 
 
 
307 aa  109  6e-23  Petrotoga mobilis SJ95  Bacteria  normal  0.372981  n/a   
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  27.37 
 
 
311 aa  109  7.000000000000001e-23  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_3676  binding-protein-dependent transport systems inner membrane component  30.07 
 
 
309 aa  109  7.000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  31.94 
 
 
300 aa  109  8.000000000000001e-23  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03710  carbohydrate ABC transporter membrane protein  30.21 
 
 
332 aa  108  9.000000000000001e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.899537 
 
 
-
 
NC_010816  BLD_1059  MalF-type ABC sugar transport systems permease component  31.46 
 
 
310 aa  108  9.000000000000001e-23  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  27.83 
 
 
306 aa  108  1e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013745  Htur_4489  binding-protein-dependent transport systems inner membrane component  27.87 
 
 
308 aa  108  1e-22  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.283214  n/a   
 
 
-
 
NC_012669  Bcav_2273  binding-protein-dependent transport systems inner membrane component  25.78 
 
 
302 aa  108  1e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2338  ABC-type glucosylglycerol transport system permease protein  30.69 
 
 
328 aa  107  2e-22  Thermobifida fusca YX  Bacteria  normal  0.379248  n/a   
 
 
-
 
NC_013521  Sked_02940  carbohydrate ABC transporter membrane protein  30.03 
 
 
318 aa  108  2e-22  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_2048  binding-protein-dependent transport systems inner membrane component  32.29 
 
 
332 aa  107  2e-22  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0870  binding-protein-dependent transport systems inner membrane component  27.33 
 
 
309 aa  107  2e-22  Nocardioides sp. JS614  Bacteria  normal  0.800905  n/a   
 
 
-
 
NC_012669  Bcav_2591  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
322 aa  107  2e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.548364  normal 
 
 
-
 
NC_009664  Krad_3468  binding-protein-dependent transport systems inner membrane component  27.05 
 
 
321 aa  107  2e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4864  binding-protein-dependent transport systems inner membrane component  27.49 
 
 
319 aa  108  2e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.243677  normal  0.263269 
 
 
-
 
NC_008148  Rxyl_0622  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
294 aa  107  3e-22  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.431073  n/a   
 
 
-
 
NC_009523  RoseRS_0802  binding-protein-dependent transport systems inner membrane component  28.25 
 
 
330 aa  107  3e-22  Roseiflexus sp. RS-1  Bacteria  normal  0.817571  normal  0.701036 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  28.62 
 
 
309 aa  107  3e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013526  Tter_2615  binding-protein-dependent transport systems inner membrane component  30 
 
 
307 aa  107  4e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000296099  n/a   
 
 
-
 
NC_012669  Bcav_2602  binding-protein-dependent transport systems inner membrane component  30.13 
 
 
306 aa  106  4e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0924232  normal 
 
 
-
 
NC_013131  Caci_3588  binding-protein-dependent transport systems inner membrane component  28.96 
 
 
338 aa  107  4e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.786552  normal 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  29.39 
 
 
316 aa  107  4e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  27.71 
 
 
308 aa  107  4e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_007488  RSP_3942  ABC sugar transporter, inner membrane subunit  27.95 
 
 
321 aa  106  5e-22  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.108149  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  29.5 
 
 
320 aa  106  5e-22  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
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