| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0627 |
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| Symbol | |
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| ID | 5453008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 692022 |
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| End bp | 692906 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640874368 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001410139 |
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| Protein GI | 154249314 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000558297 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAAT TTAAGAAAAA ATGGTGGATA CCTTACGCTT TTTTAGCTTT GCCGATTACT
TTTTACATTA TTTGGGTTAT CATTCCAATT TTCCAAACTT TTATATATAG CTTCACAGAT
TGGGATAGTA TATCTCCAAC ATTTAATTTC GTTGGATTTC AAAATTACAA AGACCTTTTC
CAAGATTATT ACTTTTTACT CTCTTTGAAA AATAATTTCT ACTGGATGAT AGGATTTGTA
TTTATCTCTA TCCCTCTTGG TCTCGGATTT GCTATGCTTA TGGATCAAAA ATTCCCCGGG
CACAAAGTTT ATAAGTCTCT TGTTTATTTA CCGATGACTC TCTCTTTCGT TGTTATTGGT
CAAATCTGGT CTTGGATTTT AGAACCACGA AATGGTGCGT TAAATACATT CTTGAGAGCT
ATCGGCCTTT CCAATTTAGC AAGGCCGTGG ATTAGTGACC CGAATATAGT GACGTTTTCT
CTAATAGCCG CGGCACTTTG GAGACAAGTT GCTTACGCAA TGATTCTTTT CTTGGCAGGT
TTACAAGGAG TTTCCAAAGA GCATGTTGAA GCAGCTTACG TTGATGGGGC AAATTCGTTC
CAAAGATTTT GGCATGTTAT ACTTCCTGAG TTAAGGCCTG CGACTGTTAT AGCGATTACG
GTGAATATAA TAGACTCTTT GAGAGCATTC GATATAGTTT TTGTAATGAC TCGTGGAGGT
CCGTTCTATT CTTCAAGTGT TATGGCTAAT TATATGTACA TAAAAGCGTT TCATAATTAC
AATATGGGAT ACGGTTCCGC TATAGCTGTT ATACAATTTT TGATAACTCT TGTGTTTATA
ATAGCTTATC TCAACAATGT TCTTAAGAAG GAGGAAAGGG AATGA
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| Protein sequence | MNKFKKKWWI PYAFLALPIT FYIIWVIIPI FQTFIYSFTD WDSISPTFNF VGFQNYKDLF
QDYYFLLSLK NNFYWMIGFV FISIPLGLGF AMLMDQKFPG HKVYKSLVYL PMTLSFVVIG
QIWSWILEPR NGALNTFLRA IGLSNLARPW ISDPNIVTFS LIAAALWRQV AYAMILFLAG
LQGVSKEHVE AAYVDGANSF QRFWHVILPE LRPATVIAIT VNIIDSLRAF DIVFVMTRGG
PFYSSSVMAN YMYIKAFHNY NMGYGSAIAV IQFLITLVFI IAYLNNVLKK EERE
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