| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3942 |
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| Symbol | |
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| ID | 7858005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 4361762 |
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| End bp | 4362730 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643868045 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002883945 |
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| Protein GI | 229822419 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.300337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCG CCGTCGCGAC CTCGCCATCG ACACCGAAGC GGGCTGCCCC GTCGTCGTCA
CGCCGGCGCG CCCGCCGCCG CGCGACGATC TGGGGCTACG TCTTCCTCCT CCCCCTCATC
CTCATCTTCG GGGGCTTCAC GCTCTGGCCG ATCGTGGCGA GCTGGGGCTA CTCGTTCTTC
GACTGGGACG GCGTCGGCCC GCCCGAGGAC TTCGTGGGGC TGGCGAACTT CAGCGAGGCG
CTCGGCTCGG CCTCGTTCTG GAACGCGTTC GGCAACTCGT TCCTCTTCTC GCTCGGCGCC
CTCCTGGTCG AGCTCCCCCT CGCGCTGATC CTGGCGCTCG TGCTCAACAA CACGCTGCTG
CGCGGGCGCA ACGTGTACCG GCTCGCGTTC TTCCTGCCGG TCGTGGCGAC GACGGCGGTC
ATCGGCATGG TCATCGCCGT CCTGCTCTCG CCGGTCGGCG GGGTGGTGAA CGAGGCGCTG
CGCTCGATCG GGCTCATCGA CCGACCGATC AACTTCCTCG GGAGCCCGTC GACGGCGCTG
CCCACCGTCA TCGGCGTCGA CATCTGGAAG GGCTTCGGCA TCACGCTCAT CTACTGGCTG
GCGGCGCTGC AGACGGTCCC CAAGGACCTC TACGAGGCGG CCAAGCTCGA CGGCGCGTCC
CCCCGCCAGC AGCTCGCGAG CGTGACGCTG CCCGTGCTGA TGCCGCTCGC CGTCGTCATC
CTCCTGCTGA CGTTCCAGCG GAGCCTCAAC ACGTTCGACC TCGTGCAGTC CATGACCGGA
GGTGGGCCCG TGTACTCCAC GGACGTCGTC CCGACGTACA TCTACCGGTA CGCGTTCGAT
CCCGTGTCGG CGGCGCCGCG GTACGGGTTC GCCTGCGCCG TCGGCGTCGT GTTCGGTCTG
TTCACGCTGC TCATCACGCT GCTCCAGGGC CCGCTGCTGG CCGGCCGCAT GCGGAAGAGC
GCCGCATGA
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| Protein sequence | MATAVATSPS TPKRAAPSSS RRRARRRATI WGYVFLLPLI LIFGGFTLWP IVASWGYSFF
DWDGVGPPED FVGLANFSEA LGSASFWNAF GNSFLFSLGA LLVELPLALI LALVLNNTLL
RGRNVYRLAF FLPVVATTAV IGMVIAVLLS PVGGVVNEAL RSIGLIDRPI NFLGSPSTAL
PTVIGVDIWK GFGITLIYWL AALQTVPKDL YEAAKLDGAS PRQQLASVTL PVLMPLAVVI
LLLTFQRSLN TFDLVQSMTG GGPVYSTDVV PTYIYRYAFD PVSAAPRYGF ACAVGVVFGL
FTLLITLLQG PLLAGRMRKS AA
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