Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1026 |
Symbol | |
ID | 7309849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1278646 |
End bp | 1279548 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643607953 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002505368 |
Protein GI | 220928459 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0038089 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGTGA AAAGACGAAC CCTGGAAAAT GAGAGAAAAC GGTCAACAGC TATCGTTGCA ACTCTTTTCC TTTTACCGGT TGCATTTTTC TTAATAGTTT ATATTTTTCG CTCAGTAATA TATACATTTA AACTAAGCAC TCTTGATTGG AATGGGGTAA GCCAGTCAAC TGATTATATC GGAATTGGAA ACTGGTTAAC ACTTATAAAA GATGAGACCT TTTTTACAAC GATAAAAAAT AACTTAATTA TGGTTGTAGC CTGTCTGATA ATTCAGATGC CAATAGCTTT AGTTTTGGCT TATTTACTAG ATTGGACCAA TTCAAAAGCG AAATTCCTTA AGTCTTTATA CTTCCTTCCT TTATTAATGA GTTCAGTTGC GTTAGGATTT CTTTTCAAGC AATTACTAGA TTCTAATTAT GGGCTCGCAG GGGCTGTTAT GAGTTTCTTT ATGGATAGTC CGTTTAACTT GCTTGGCAAT GAAAAGACTG CAATTTGGGC AGTCATAGGT GTTATCTGCT GGCAATACAT ACCTTTTTAC ATGGTTTACT ATTTTGCCGG ACTGACTTCA ATATCACCGG AATTATATGA GGCAGCTGTA ATAGATGGTG CAAAACGTCA TCAATATATA TTTAGAATTT CTCTACCAAT GTTAAGTGAT ACAATCAAGG CTGCTACAAT CATGTGTCTG GTAGGTTCAT TAAAATACTT TGATTTAATA TATGTAATGA CTGAGGGTGG TCCGTCTGGA AGCACCGAGC TGATGGCTAC ATATATGTAT AAAAATGCCT TTACCCAGAT GAAAATGGGG TACGGCTCTA CTATAGCGGC AGCAATGTTT ATCATAATAA CAACTATATC ACTTTTGACA TTTAAAATGA TGAATATTAA GGAGGAAAAA TAA
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Protein sequence | MGVKRRTLEN ERKRSTAIVA TLFLLPVAFF LIVYIFRSVI YTFKLSTLDW NGVSQSTDYI GIGNWLTLIK DETFFTTIKN NLIMVVACLI IQMPIALVLA YLLDWTNSKA KFLKSLYFLP LLMSSVALGF LFKQLLDSNY GLAGAVMSFF MDSPFNLLGN EKTAIWAVIG VICWQYIPFY MVYYFAGLTS ISPELYEAAV IDGAKRHQYI FRISLPMLSD TIKAATIMCL VGSLKYFDLI YVMTEGGPSG STELMATYMY KNAFTQMKMG YGSTIAAAMF IIITTISLLT FKMMNIKEEK
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