Gene Ccel_1026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1026 
Symbol 
ID7309849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1278646 
End bp1279548 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content35% 
IMG OID643607953 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002505368 
Protein GI220928459 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0038089 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGTGA AAAGACGAAC CCTGGAAAAT GAGAGAAAAC GGTCAACAGC TATCGTTGCA 
ACTCTTTTCC TTTTACCGGT TGCATTTTTC TTAATAGTTT ATATTTTTCG CTCAGTAATA
TATACATTTA AACTAAGCAC TCTTGATTGG AATGGGGTAA GCCAGTCAAC TGATTATATC
GGAATTGGAA ACTGGTTAAC ACTTATAAAA GATGAGACCT TTTTTACAAC GATAAAAAAT
AACTTAATTA TGGTTGTAGC CTGTCTGATA ATTCAGATGC CAATAGCTTT AGTTTTGGCT
TATTTACTAG ATTGGACCAA TTCAAAAGCG AAATTCCTTA AGTCTTTATA CTTCCTTCCT
TTATTAATGA GTTCAGTTGC GTTAGGATTT CTTTTCAAGC AATTACTAGA TTCTAATTAT
GGGCTCGCAG GGGCTGTTAT GAGTTTCTTT ATGGATAGTC CGTTTAACTT GCTTGGCAAT
GAAAAGACTG CAATTTGGGC AGTCATAGGT GTTATCTGCT GGCAATACAT ACCTTTTTAC
ATGGTTTACT ATTTTGCCGG ACTGACTTCA ATATCACCGG AATTATATGA GGCAGCTGTA
ATAGATGGTG CAAAACGTCA TCAATATATA TTTAGAATTT CTCTACCAAT GTTAAGTGAT
ACAATCAAGG CTGCTACAAT CATGTGTCTG GTAGGTTCAT TAAAATACTT TGATTTAATA
TATGTAATGA CTGAGGGTGG TCCGTCTGGA AGCACCGAGC TGATGGCTAC ATATATGTAT
AAAAATGCCT TTACCCAGAT GAAAATGGGG TACGGCTCTA CTATAGCGGC AGCAATGTTT
ATCATAATAA CAACTATATC ACTTTTGACA TTTAAAATGA TGAATATTAA GGAGGAAAAA
TAA
 
Protein sequence
MGVKRRTLEN ERKRSTAIVA TLFLLPVAFF LIVYIFRSVI YTFKLSTLDW NGVSQSTDYI 
GIGNWLTLIK DETFFTTIKN NLIMVVACLI IQMPIALVLA YLLDWTNSKA KFLKSLYFLP
LLMSSVALGF LFKQLLDSNY GLAGAVMSFF MDSPFNLLGN EKTAIWAVIG VICWQYIPFY
MVYYFAGLTS ISPELYEAAV IDGAKRHQYI FRISLPMLSD TIKAATIMCL VGSLKYFDLI
YVMTEGGPSG STELMATYMY KNAFTQMKMG YGSTIAAAMF IIITTISLLT FKMMNIKEEK