Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5026 |
Symbol | |
ID | 8336380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5757444 |
End bp | 5758334 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644958125 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003115727 |
Protein GI | 256394163 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0515819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.562108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCTC CGGCACTCCG GCAGCGCGGC GAGAGCGCCC TGGGCGCGAT CGCCGTGCTG GCCCTCGGTT TGTACGCGCT GTTCATCGTC GTGCCGGTGA TCATGAGCGC GTGGAAGAGC CTGACCGACG AGAACCCGCT GCTGGCGCAC GCGAAGTTCG TCGGCGTGTC CAACTACACC GACATGCTGC ACGACGACGC CTTGACGGCG AGTCTCACCT TCACGCTGGT CACCGCGCTG ACGGTGACGC TCGTCGCCAA CGTCGCGGGC ATCGGGTTCG CGATGCTGCT GAACAAGACT TCGCTGAGTT TCCGCATGAT GCGCACGGTC GCATTCCTGC CGCAGGTGCT GTCCGGCGTC ATCGTCGGCT TCGTCTGGCG CTACATCCTG GCGCAGGACG GCATCCTCAA TCATCTGCTG CTCAGCGCCG GGATCATCGG GCGCCCGATC ACCTGGCTGG GCAGCCCGCA CCTGGCGATG TTCTCTGTCG GGCTGGTCGC CGCGTGGGTG CTGACCGGGT TCACCACGGT CGTGCACCTG GCGGCGCTGC AGTCGGTTCC GGTCGAGCTG TACCAGGCGG CCACGGTCGA CGGCGCGGGG CGCTGGCAGC GGTTCCGCCA GATCACGCTG CCGATGGTGG CTCCCGGTAC GACAATCAGC GTCACGATCT CGCTGATCAC GACGCTGAAG CTGTACGACA TCATCGCGGC GCTGACGTCC GGTGGTCCGG CGAACTCCAC GCAGTCCACT GCGTTGTACA TCGTCAATCT CGCGTTCACA GACGACCGGT TCGGCTATGC CTCGGCGGTG GCGATGCTGC TGCTGGTGGT CTCGGCGGCG ATCGCGCTCA GCGTGACCGG GTTGCTTCGG CGCCGGGAGG TGGACCTGTG A
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Protein sequence | MTSPALRQRG ESALGAIAVL ALGLYALFIV VPVIMSAWKS LTDENPLLAH AKFVGVSNYT DMLHDDALTA SLTFTLVTAL TVTLVANVAG IGFAMLLNKT SLSFRMMRTV AFLPQVLSGV IVGFVWRYIL AQDGILNHLL LSAGIIGRPI TWLGSPHLAM FSVGLVAAWV LTGFTTVVHL AALQSVPVEL YQAATVDGAG RWQRFRQITL PMVAPGTTIS VTISLITTLK LYDIIAALTS GGPANSTQST ALYIVNLAFT DDRFGYASAV AMLLLVVSAA IALSVTGLLR RREVDL
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