More than 300 homologs were found in PanDaTox collection
for query gene Bcav_3942 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_3942  binding-protein-dependent transport systems inner membrane component  100 
 
 
322 aa  628  1e-179  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.300337 
 
 
-
 
NC_012669  Bcav_1541  binding-protein-dependent transport systems inner membrane component  44.96 
 
 
327 aa  228  1e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.128939 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  39.47 
 
 
307 aa  193  3e-48  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  39.47 
 
 
307 aa  193  3e-48  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
299 aa  184  2.0000000000000003e-45  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  40.13 
 
 
305 aa  182  5.0000000000000004e-45  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
309 aa  175  9e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  38.94 
 
 
330 aa  174  1.9999999999999998e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
296 aa  170  3e-41  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_013595  Sros_3074  sugar ABC transporter permease protein  35.88 
 
 
307 aa  168  1e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.146884 
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  35.17 
 
 
319 aa  168  1e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
306 aa  167  2.9999999999999998e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  35.41 
 
 
328 aa  167  2.9999999999999998e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_013521  Sked_11550  carbohydrate ABC transporter membrane protein  37.16 
 
 
354 aa  167  2.9999999999999998e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal  0.0144146 
 
 
-
 
NC_012669  Bcav_3676  binding-protein-dependent transport systems inner membrane component  35.57 
 
 
309 aa  166  4e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1304  MalF-type ABC sugar transport systems permease component  32.13 
 
 
334 aa  166  5e-40  Bifidobacterium longum DJO10A  Bacteria  decreased coverage  0.00913134  n/a   
 
 
-
 
NC_013521  Sked_02940  carbohydrate ABC transporter membrane protein  37.41 
 
 
318 aa  164  1.0000000000000001e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  33.89 
 
 
309 aa  164  2.0000000000000002e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010483  TRQ2_0115  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
300 aa  162  5.0000000000000005e-39  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0117  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
300 aa  162  5.0000000000000005e-39  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  32.48 
 
 
306 aa  162  7e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
295 aa  161  1e-38  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2895  binding-protein-dependent transport systems inner membrane component  31.79 
 
 
316 aa  159  5e-38  Roseiflexus sp. RS-1  Bacteria  normal  0.0497455  normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  34.84 
 
 
316 aa  157  2e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  36.03 
 
 
311 aa  157  3e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  34.43 
 
 
307 aa  156  5.0000000000000005e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_010320  Teth514_0754  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
324 aa  156  5.0000000000000005e-37  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000204062  n/a   
 
 
-
 
NC_013521  Sked_07100  carbohydrate ABC transporter membrane protein  34.49 
 
 
318 aa  155  7e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.790586  normal 
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  36.73 
 
 
297 aa  155  9e-37  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  35.59 
 
 
293 aa  155  1e-36  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0615  binding-protein-dependent transport systems inner membrane component  31.03 
 
 
296 aa  155  1e-36  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  35.62 
 
 
300 aa  151  1e-35  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_1315  ABC transporter, permease protein  34.01 
 
 
301 aa  151  1e-35  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_4197  binding-protein-dependent transport systems inner membrane component  34.39 
 
 
326 aa  151  1e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.979447  normal 
 
 
-
 
NC_009767  Rcas_1880  binding-protein-dependent transport systems inner membrane component  33.73 
 
 
316 aa  152  1e-35  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.2607 
 
 
-
 
NC_014248  Aazo_4983  binding-protein-dependent transporter inner membrane protein  30.99 
 
 
310 aa  150  2e-35  'Nostoc azollae' 0708  Bacteria  normal  0.300856  n/a   
 
 
-
 
NC_011899  Hore_13130  binding-protein-dependent transport systems inner membrane component  34.64 
 
 
293 aa  150  3e-35  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  31.88 
 
 
321 aa  150  3e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1261  binding-protein dependent transport system inner membrane protein  36.36 
 
 
298 aa  150  4e-35  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.196832  n/a   
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  36.26 
 
 
275 aa  149  7e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0295  ABC-type sugar transport system periplasmic component-like protein  30.69 
 
 
300 aa  148  1.0000000000000001e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0699  binding-protein-dependent transport systems inner membrane component  36.11 
 
 
291 aa  148  1.0000000000000001e-34  Dickeya dadantii Ech703  Bacteria  normal  0.216687  n/a   
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  33.58 
 
 
310 aa  148  1.0000000000000001e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_2471  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
305 aa  148  2.0000000000000003e-34  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.12566 
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  32.78 
 
 
295 aa  147  2.0000000000000003e-34  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
299 aa  147  3e-34  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_013172  Bfae_00850  carbohydrate ABC transporter membrane protein  35.53 
 
 
320 aa  147  3e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3565  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
316 aa  147  3e-34  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.702273  normal  0.0136241 
 
 
-
 
NC_012669  Bcav_1681  binding-protein-dependent transport systems inner membrane component  35.38 
 
 
316 aa  147  3e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.130846  normal 
 
 
-
 
NC_008541  Arth_1946  binding-protein-dependent transport systems inner membrane component  31.31 
 
 
320 aa  146  5e-34  Arthrobacter sp. FB24  Bacteria  normal  0.305055  n/a   
 
 
-
 
NC_008578  Acel_2048  binding-protein-dependent transport systems inner membrane component  36.57 
 
 
332 aa  146  5e-34  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  32.65 
 
 
311 aa  146  6e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_009667  Oant_0353  binding-protein-dependent transport systems inner membrane component  33.55 
 
 
317 aa  146  6e-34  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0740262  n/a   
 
 
-
 
NC_013174  Jden_2071  binding-protein-dependent transport systems inner membrane component  32.46 
 
 
345 aa  145  7.0000000000000006e-34  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.0000672298  normal 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  31.95 
 
 
318 aa  145  8.000000000000001e-34  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
293 aa  145  8.000000000000001e-34  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_013525  Tter_1290  binding-protein-dependent transport systems inner membrane component  34.64 
 
 
297 aa  145  9e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012850  Rleg_1307  binding-protein-dependent transport systems inner membrane component  35.07 
 
 
297 aa  145  9e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
311 aa  145  9e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007948  Bpro_3816  binding-protein-dependent transport systems inner membrane component  34.96 
 
 
327 aa  145  1e-33  Polaromonas sp. JS666  Bacteria  normal  0.744275  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
316 aa  144  2e-33  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3408  binding-protein-dependent transport systems inner membrane component  31.67 
 
 
293 aa  144  2e-33  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00259426  n/a   
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  36.21 
 
 
292 aa  144  3e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_009485  BBta_3986  putative ABC transporter (permease protein)  35.29 
 
 
313 aa  144  3e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1530  binding-protein-dependent transport systems inner membrane component  34.05 
 
 
295 aa  143  3e-33  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5475  binding-protein-dependent transport systems inner membrane component  31.1 
 
 
312 aa  143  4e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.44322 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
306 aa  143  4e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_012792  Vapar_6266  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
320 aa  143  4e-33  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0870  binding-protein-dependent transport systems inner membrane component  34.96 
 
 
309 aa  142  5e-33  Nocardioides sp. JS614  Bacteria  normal  0.800905  n/a   
 
 
-
 
NC_009654  Mmwyl1_1650  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
311 aa  143  5e-33  Marinomonas sp. MWYL1  Bacteria  normal  0.502372  normal  0.968755 
 
 
-
 
NC_009718  Fnod_0627  binding-protein-dependent transport systems inner membrane component  32.56 
 
 
294 aa  143  5e-33  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000558297  n/a   
 
 
-
 
NC_011369  Rleg2_1219  binding-protein-dependent transport systems inner membrane component  34.33 
 
 
297 aa  142  6e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_1355  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
304 aa  142  6e-33  Jannaschia sp. CCS1  Bacteria  normal  0.0278828  normal  0.740502 
 
 
-
 
NC_011886  Achl_3533  binding-protein-dependent transport systems inner membrane component  33.01 
 
 
319 aa  142  7e-33  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.255158 
 
 
-
 
NC_010001  Cphy_3589  binding-protein-dependent transport systems inner membrane component  30.93 
 
 
294 aa  142  7e-33  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00013616  n/a   
 
 
-
 
NC_013526  Tter_2501  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
312 aa  142  7e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1875  MalF-type ABC sugar transport systems permease component  31.39 
 
 
350 aa  142  9.999999999999999e-33  Bifidobacterium longum DJO10A  Bacteria  normal  0.0432685  n/a   
 
 
-
 
NC_004311  BRA0518  sugar ABC transporter, permease protein  34.44 
 
 
314 aa  141  9.999999999999999e-33  Brucella suis 1330  Bacteria  normal  0.721567  n/a   
 
 
-
 
NC_012669  Bcav_2817  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
310 aa  141  9.999999999999999e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.822068  normal 
 
 
-
 
NC_009504  BOV_A0451  sugar ABC transporter, permease protein  34.57 
 
 
308 aa  142  9.999999999999999e-33  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0044  binding-protein-dependent transport systems inner membrane component  34.19 
 
 
304 aa  141  9.999999999999999e-33  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  33.22 
 
 
293 aa  142  9.999999999999999e-33  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_1775  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
309 aa  140  1.9999999999999998e-32  Nakamurella multipartita DSM 44233  Bacteria  normal  0.114297  normal  0.0929805 
 
 
-
 
NC_013530  Xcel_0918  binding-protein-dependent transport systems inner membrane component  32.35 
 
 
298 aa  140  1.9999999999999998e-32  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3547  binding-protein-dependent transport systems inner membrane component  35.47 
 
 
314 aa  141  1.9999999999999998e-32  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0450985  n/a   
 
 
-
 
NC_012848  Rleg_5212  binding-protein-dependent transport systems inner membrane component  31.69 
 
 
312 aa  140  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.481723 
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
299 aa  140  3e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_013131  Caci_3588  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
338 aa  140  3e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.786552  normal 
 
 
-
 
NC_011898  Ccel_1026  binding-protein-dependent transport systems inner membrane component  27.36 
 
 
300 aa  140  3e-32  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0038089  n/a   
 
 
-
 
NC_013172  Bfae_01820  permease component of ABC-type sugar transporter  33.33 
 
 
312 aa  140  3e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
318 aa  140  3.9999999999999997e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_012669  Bcav_3983  binding-protein-dependent transport systems inner membrane component  35.83 
 
 
302 aa  140  3.9999999999999997e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.159905  normal 
 
 
-
 
NC_011884  Cyan7425_0944  binding-protein-dependent transport systems inner membrane component  36.29 
 
 
290 aa  140  3.9999999999999997e-32  Cyanothece sp. PCC 7425  Bacteria  normal  0.120711  normal  0.307929 
 
 
-
 
NC_009664  Krad_0116  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
317 aa  140  3.9999999999999997e-32  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.156333  normal  0.563407 
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
298 aa  139  3.9999999999999997e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4034  binding-protein-dependent transport systems inner membrane component  33.01 
 
 
303 aa  140  3.9999999999999997e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  33.1 
 
 
312 aa  139  4.999999999999999e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  33.98 
 
 
320 aa  139  4.999999999999999e-32  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_3403  binding-protein-dependent transport systems inner membrane component  34.18 
 
 
315 aa  139  4.999999999999999e-32  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2707  binding-protein-dependent transport systems inner membrane component  36.22 
 
 
315 aa  139  6e-32  Chelativorans sp. BNC1  Bacteria  normal  0.0971467  n/a   
 
 
-
 
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