Gene Rleg_5212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5212 
Symbol 
ID8007107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp622727 
End bp623665 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content56% 
IMG OID644822121 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002973381 
Protein GI241113546 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.481723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATT CGGCTACGGC TCTGATCGCT GCGCACCCCA AAGCGCGAAG AAAAGGATGG 
CTTCGTTACA GCACTTTGAG GAAGCTGGTC CCGTATTTCT ACGTGTCGCC GGCGACCCTG
CTGCTTGTGC TGCTGATGCT GTTCCCGATG GTGATGGTCT TCAAATATTC TCTGATGGAC
GGCGCCATCA TGAAAAAGAC CGCTGCCTTC GCAGGGCTCC AGAACTATGT GACCATCTTT
GAAAATCCGG TCTTCTGGCA GTCGGTCGCG CAGACGCTTT ATTTCACGAT CATGAGCGTC
GTCTTCCACT TCATCATCGG CCTGGCATTC GCGCTGCTGT TGAACACCAA CCGCGTCGAT
CCACTCATTC GCAGCATCCT GCGTGTGCTC TTCATCCTGC CCTGGCTGTT CACCGCCGTC
ATCATCGCCA TCATCTGGCG CCTGCTGCTC GACCCGAACG GCGTCGTCAA CAGCGTGCTG
ATGGCGCTCC ATATCATCAA CTTCAAGGTC GAGTGGTTTT CGTCGACGCG CACCGCCATT
CACGCTTTGA CCTTCGCAAA CATCTGGGCG GGTTATCCGC TCTACATGGT CAGCCTGCTC
GCCGGCCTTC AGGGCATTTC GAAGGAGCTC TACGAGGCGG CCGGTATCGA CGGCGCCAAC
GGACTCCAAA AGTTCTGGTA CATCACCATT CCGCAGCTGA TGCCGATCAT CATCAGCATC
GCGCTTCTCG ACTTCATCTG GACGATGCAG GTTTTTCCGC TTGTATGGAT GACGACGGGC
GGCGGCCCGA TCTACTCGAC GGAAGTGCTC TCCACCTTCA CCTACAAGCT CGCCTTCTCG
CAGTATGAAT TCTCGCTGGC TTCGGCGAGC GCGATGATCA TCCTCATCAT CTCGATGAGC
GTCACCTATT TCTACATCAA ACACCAGCAG CGCAGGTGA
 
Protein sequence
MNHSATALIA AHPKARRKGW LRYSTLRKLV PYFYVSPATL LLVLLMLFPM VMVFKYSLMD 
GAIMKKTAAF AGLQNYVTIF ENPVFWQSVA QTLYFTIMSV VFHFIIGLAF ALLLNTNRVD
PLIRSILRVL FILPWLFTAV IIAIIWRLLL DPNGVVNSVL MALHIINFKV EWFSSTRTAI
HALTFANIWA GYPLYMVSLL AGLQGISKEL YEAAGIDGAN GLQKFWYITI PQLMPIIISI
ALLDFIWTMQ VFPLVWMTTG GGPIYSTEVL STFTYKLAFS QYEFSLASAS AMIILIISMS
VTYFYIKHQQ RR