Gene Sked_02940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_02940 
Symbol 
ID8631932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp321386 
End bp322342 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content63% 
IMG OID 
Productcarbohydrate ABC transporter membrane protein 
Protein accessionYP_003313097 
Protein GI269793642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCTG CACTCGCAGA CCGTGACGCG GAGACCGGCC TCGACCGGTC CACGGATGTC 
GCTCCGGCAC CCCGACGCAG GAAGTCCCTC AAGCGGACCC TCGTCCCCTA CGCGTTCCTG
TCGCCCACCG GCATCCTGAT GATCGTGCTC CTGCTGGTGC CGATCATCAT GGTCATCAGC
TACTCGCTGA TGGACAACGT CATCACCAAC AAGAACCCGG TGTTCGTCGG GATCGGCAAC
TACGTCGACA TCCTCACCGA CCCGACGTTC CTCGTCGCCG TGCGCAACAC CCTCGTGTTC
ACCGGGTCGA GCGTCGTGGC CCACCTGCTC CTCGGGCTCG GCTTCGCGAT GCTGCTCAAC
ACCAAGCTCC TCGGCAACAA GGTCAAGGCC CTGTTCCGCG TGATCTACGT GCTGCCGTGG
CTGTTCACCG TCGCGATCAT CGCGGTGCTG TGGCGCCTCA TGCTCAACCC CAACGGCGTC
ATCAACTACC TGCTGAACAC CGCAGGGATC ATCGACCAGA ACATCGAGTG GTTGTCCTCA
CCGTCGACCG CGCTGTTCGC CGTCACCTTC ATCAACATCT GGGCCGGCTA CCCCTTCTAC
ATGATCAGCC TCCTCGCAGG GCTCCAAGGG ATCCCCAAGG ACCTCTACGA GGCGGCCACC
GTGGACGGGG CCAGCGCCCG GCAGCAGTTC TTCAACGTCA CGCTCCCGCA GCTCAAGCCG
ATCATCATCT CGATGGCGAT GCTCGACTTC ATCTGGACGT CGCAGCAGTT CGCGCTCATC
TGGATGACCA CGGGAGGTGG CCCCCTCAAC GTCACCGAGA TGGTCAGCAC CTTCACCTAC
AAGCTGGCGT TCTCCCGGTA CGAGTTCTCG ATGGCCTCGG CGGCCGCAGT GATCGTGCTG
CTCGCCACCC TGGTCCTGGC GTTCTTCTAC GCCCGTCACC AGAATGCGCG GGACTGA
 
Protein sequence
MRPALADRDA ETGLDRSTDV APAPRRRKSL KRTLVPYAFL SPTGILMIVL LLVPIIMVIS 
YSLMDNVITN KNPVFVGIGN YVDILTDPTF LVAVRNTLVF TGSSVVAHLL LGLGFAMLLN
TKLLGNKVKA LFRVIYVLPW LFTVAIIAVL WRLMLNPNGV INYLLNTAGI IDQNIEWLSS
PSTALFAVTF INIWAGYPFY MISLLAGLQG IPKDLYEAAT VDGASARQQF FNVTLPQLKP
IIISMAMLDF IWTSQQFALI WMTTGGGPLN VTEMVSTFTY KLAFSRYEFS MASAAAVIVL
LATLVLAFFY ARHQNARD