More than 300 homologs were found in PanDaTox collection
for query gene Sked_26380 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_0748  GTP-dependent nucleic acid-binding protein EngD  88.09 
 
 
369 aa  638    Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_26380  GTP-binding protein YchF  100 
 
 
361 aa  719    Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0845459 
 
 
-
 
NC_013530  Xcel_0946  GTP-binding protein YchF  83.1 
 
 
361 aa  602  1.0000000000000001e-171  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1105  GTP-dependent nucleic acid-binding protein EngD  78.12 
 
 
361 aa  560  1.0000000000000001e-159  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.692178 
 
 
-
 
NC_014151  Cfla_0977  GTP-binding protein YchF  81.16 
 
 
358 aa  561  1.0000000000000001e-159  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.245774  hitchhiker  0.00114943 
 
 
-
 
NC_013172  Bfae_22930  GTP-dependent nucleic acid-binding protein EngD  75.21 
 
 
361 aa  543  1e-153  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2831  GTP-dependent nucleic acid-binding protein EngD  75.9 
 
 
368 aa  540  9.999999999999999e-153  Arthrobacter sp. FB24  Bacteria  normal  0.593989  n/a   
 
 
-
 
NC_011886  Achl_2546  GTP-dependent nucleic acid-binding protein EngD  74.79 
 
 
363 aa  531  1e-150  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000002151 
 
 
-
 
NC_013131  Caci_8269  GTP-dependent nucleic acid-binding protein EngD  72.02 
 
 
357 aa  528  1e-149  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4160  GTP-dependent nucleic acid-binding protein EngD  74.24 
 
 
361 aa  525  1e-148  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000134834 
 
 
-
 
NC_009380  Strop_3781  GTP-dependent nucleic acid-binding protein EngD  73.68 
 
 
361 aa  524  1e-147  Salinispora tropica CNB-440  Bacteria  normal  normal  0.699286 
 
 
-
 
NC_014210  Ndas_0133  GTP-binding protein YchF  72.53 
 
 
361 aa  516  1.0000000000000001e-145  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8476  GTP-binding protein YchF  72.1 
 
 
362 aa  517  1.0000000000000001e-145  Streptosporangium roseum DSM 43021  Bacteria  normal  0.775953  normal 
 
 
-
 
NC_013510  Tcur_1095  GTP-binding protein YchF  73 
 
 
363 aa  515  1.0000000000000001e-145  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0537245  n/a   
 
 
-
 
NC_009664  Krad_1124  GTP-dependent nucleic acid-binding protein EngD  74.79 
 
 
361 aa  512  1e-144  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.356013 
 
 
-
 
NC_013093  Amir_0736  GTP-dependent nucleic acid-binding protein EngD  74.52 
 
 
359 aa  511  1e-144  Actinosynnema mirum DSM 43827  Bacteria  normal  0.217905  n/a   
 
 
-
 
NC_013159  Svir_31400  GTP-dependent nucleic acid-binding protein EngD  72.65 
 
 
360 aa  513  1e-144  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.292075 
 
 
-
 
NC_013169  Ksed_20210  GTP-dependent nucleic acid-binding protein EngD  73.41 
 
 
361 aa  510  1e-143  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.640353  normal  0.191287 
 
 
-
 
NC_007333  Tfu_0473  GTP-dependent nucleic acid-binding protein EngD  70.05 
 
 
364 aa  503  1e-141  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5521  GTP-binding protein YchF  70 
 
 
358 aa  498  1e-140  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.633913  normal  0.842427 
 
 
-
 
NC_013721  HMPREF0424_0648  GTP-binding protein YchF  66.85 
 
 
362 aa  499  1e-140  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.379901 
 
 
-
 
NC_008699  Noca_1080  GTP-dependent nucleic acid-binding protein EngD  72.65 
 
 
359 aa  500  1e-140  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4365  GTP-dependent nucleic acid-binding protein EngD  73.13 
 
 
359 aa  495  1e-139  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3392  GTP-binding protein YchF  70.91 
 
 
359 aa  494  1e-139  Gordonia bronchialis DSM 43247  Bacteria  normal  0.180575  n/a   
 
 
-
 
NC_012803  Mlut_16190  GTP-dependent nucleic acid-binding protein EngD  75.64 
 
 
354 aa  496  1e-139  Micrococcus luteus NCTC 2665  Bacteria  normal  0.938895  n/a   
 
 
-
 
NC_013757  Gobs_1033  GTP-binding protein YchF  74.52 
 
 
357 aa  494  9.999999999999999e-139  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3062  GTP-binding protein YchF  69.89 
 
 
362 aa  488  1e-137  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3101  GTP-binding protein YchF  70.64 
 
 
357 aa  488  1e-137  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0667  GTP-dependent nucleic acid-binding protein EngD  66.85 
 
 
364 aa  485  1e-136  Bifidobacterium longum DJO10A  Bacteria  normal  0.416643  n/a   
 
 
-
 
NC_009338  Mflv_2082  GTP-dependent nucleic acid-binding protein EngD  70.91 
 
 
360 aa  481  1e-135  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.330246  normal  0.125841 
 
 
-
 
NC_008726  Mvan_4625  GTP-dependent nucleic acid-binding protein EngD  70.91 
 
 
360 aa  479  1e-134  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.54824  normal 
 
 
-
 
NC_009077  Mjls_4333  GTP-dependent nucleic acid-binding protein EngD  69.83 
 
 
376 aa  471  1e-132  Mycobacterium sp. JLS  Bacteria  normal  normal  0.567593 
 
 
-
 
NC_007777  Francci3_3871  GTP-dependent nucleic acid-binding protein EngD  68.7 
 
 
358 aa  474  1e-132  Frankia sp. CcI3  Bacteria  normal  0.479028  normal 
 
 
-
 
NC_008146  Mmcs_4102  GTP-dependent nucleic acid-binding protein EngD  69.83 
 
 
376 aa  471  1e-132  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1861  GTP-dependent nucleic acid-binding protein EngD  66.21 
 
 
373 aa  472  1e-132  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.924801 
 
 
-
 
NC_008705  Mkms_4178  GTP-dependent nucleic acid-binding protein EngD  69.83 
 
 
376 aa  471  1e-132  Mycobacterium sp. KMS  Bacteria  normal  0.40111  normal 
 
 
-
 
NC_009921  Franean1_0857  GTP-dependent nucleic acid-binding protein EngD  67.59 
 
 
358 aa  467  9.999999999999999e-131  Frankia sp. EAN1pec  Bacteria  normal  0.0266679  normal  0.117665 
 
 
-
 
NC_009565  TBFG_11134  GTP-dependent nucleic acid-binding protein EngD  68.14 
 
 
357 aa  451  1e-125  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0186  GTP-binding protein YchF  56.75 
 
 
354 aa  392  1e-108  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.448936 
 
 
-
 
NC_013170  Ccur_11960  GTP-binding protein YchF  57.69 
 
 
354 aa  389  1e-107  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.642415  normal 
 
 
-
 
NC_013173  Dbac_0442  GTP-binding protein YchF  55.53 
 
 
366 aa  385  1e-106  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.637193  n/a   
 
 
-
 
NC_007520  Tcr_0395  GTP-dependent nucleic acid-binding protein EngD  53.55 
 
 
363 aa  379  1e-104  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00186596  n/a   
 
 
-
 
NC_011138  MADE_02583  GTP-dependent nucleic acid-binding protein EngD  52.47 
 
 
363 aa  378  1e-104  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.0000898424  n/a   
 
 
-
 
NC_006369  lpl2579  GTP-dependent nucleic acid-binding protein EngD  52.99 
 
 
363 aa  376  1e-103  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_002976  SERP0041  GTP-dependent nucleic acid-binding protein EngD  51.5 
 
 
365 aa  371  1e-102  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp2707  GTP-dependent nucleic acid-binding protein EngD  52.72 
 
 
363 aa  374  1e-102  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010524  Lcho_0271  GTP-binding protein YchF  54.79 
 
 
364 aa  371  1e-102  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.198016 
 
 
-
 
NC_009487  SaurJH9_0411  GTP-dependent nucleic acid-binding protein EngD  52.7 
 
 
365 aa  373  1e-102  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00200515  n/a   
 
 
-
 
NC_013204  Elen_1055  GTP-binding protein YchF  55.04 
 
 
354 aa  371  1e-102  Eggerthella lenta DSM 2243  Bacteria  normal  0.0763151  hitchhiker  0.00159487 
 
 
-
 
NC_009632  SaurJH1_0422  GTP-dependent nucleic acid-binding protein EngD  52.7 
 
 
365 aa  373  1e-102  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0242427  n/a   
 
 
-
 
NC_008740  Maqu_2368  GTP-dependent nucleic acid-binding protein EngD  53.66 
 
 
363 aa  372  1e-102  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1647  GTP-dependent nucleic acid-binding protein EngD  55.41 
 
 
366 aa  374  1e-102  Desulfovibrio vulgaris DP4  Bacteria  normal  0.429909  normal  0.918011 
 
 
-
 
NC_004347  SO_1185  GTP-dependent nucleic acid-binding protein EngD  53.3 
 
 
363 aa  369  1e-101  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007404  Tbd_0390  GTP-dependent nucleic acid-binding protein EngD  54.77 
 
 
363 aa  370  1e-101  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.997224  normal  0.0213751 
 
 
-
 
NC_010084  Bmul_2871  GTP-dependent nucleic acid-binding protein EngD  54.77 
 
 
364 aa  369  1e-101  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.103234  normal  0.491395 
 
 
-
 
NC_007947  Mfla_0675  GTP-dependent nucleic acid-binding protein EngD  53.95 
 
 
361 aa  370  1e-101  Methylobacillus flagellatus KT  Bacteria  normal  0.762559  normal 
 
 
-
 
NC_008228  Patl_2571  GTP-dependent nucleic acid-binding protein EngD  51.37 
 
 
363 aa  369  1e-101  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0530  GTP-dependent nucleic acid-binding protein EngD  53.12 
 
 
363 aa  371  1e-101  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_0503  GTP-dependent nucleic acid-binding protein EngD  51.78 
 
 
363 aa  369  1e-101  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1008  GTP-dependent nucleic acid-binding protein EngD  53.02 
 
 
363 aa  370  1e-101  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000000208433  normal  0.179939 
 
 
-
 
NC_008322  Shewmr7_1073  GTP-dependent nucleic acid-binding protein EngD  53.02 
 
 
363 aa  370  1e-101  Shewanella sp. MR-7  Bacteria  unclonable  0.00000596539  normal  0.137935 
 
 
-
 
NC_008345  Sfri_0717  GTP-dependent nucleic acid-binding protein EngD  54.12 
 
 
363 aa  369  1e-101  Shewanella frigidimarina NCIMB 400  Bacteria  decreased coverage  0.000164209  n/a   
 
 
-
 
NC_008577  Shewana3_1012  GTP-dependent nucleic acid-binding protein EngD  53.02 
 
 
363 aa  370  1e-101  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00042531  normal  0.0638456 
 
 
-
 
NC_010531  Pnec_0155  GTP-binding protein YchF  53.24 
 
 
364 aa  365  1e-100  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.611358  normal  0.940592 
 
 
-
 
NC_013165  Shel_21870  GTP-binding protein YchF  54.67 
 
 
354 aa  365  1e-100  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.0475417 
 
 
-
 
NC_006055  Mfl660  GTP-dependent nucleic acid-binding protein EngD  51.22 
 
 
364 aa  367  1e-100  Mesoplasma florum L1  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2482  GTP-binding protein YchF  51.63 
 
 
365 aa  365  1e-100  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_0894  GTP-dependent nucleic acid-binding protein EngD  51.76 
 
 
363 aa  365  1e-100  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.943704 
 
 
-
 
NC_007347  Reut_A3037  GTP-dependent nucleic acid-binding protein EngD  53.39 
 
 
387 aa  365  1e-100  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3166  putative GTP-binding protein  53.97 
 
 
364 aa  365  1e-100  Methylibium petroleiphilum PM1  Bacteria  normal  hitchhiker  0.00563466 
 
 
-
 
NC_009783  VIBHAR_01244  GTP-dependent nucleic acid-binding protein EngD  52.75 
 
 
363 aa  366  1e-100  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007973  Rmet_3193  GTP-dependent nucleic acid-binding protein EngD  54.2 
 
 
363 aa  368  1e-100  Cupriavidus metallidurans CH34  Bacteria  normal  0.36162  normal 
 
 
-
 
NC_013411  GYMC61_3547  GTP-dependent nucleic acid-binding protein EngD  52.29 
 
 
366 aa  367  1e-100  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013889  TK90_0348  GTP-binding protein YchF  53.78 
 
 
364 aa  367  1e-100  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.214484 
 
 
-
 
NC_010551  BamMC406_0453  GTP-dependent nucleic acid-binding protein EngD  54.99 
 
 
364 aa  367  1e-100  Burkholderia ambifaria MC40-6  Bacteria  normal  0.660955  normal  0.0338644 
 
 
-
 
NC_008390  Bamb_0429  GTP-dependent nucleic acid-binding protein EngD  54.99 
 
 
364 aa  367  1e-100  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0657  GTP-dependent nucleic acid-binding protein EngD  53.66 
 
 
364 aa  364  1e-99  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2852  GTP-dependent nucleic acid-binding protein EngD  53.02 
 
 
363 aa  365  1e-99  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.0000000959871  n/a   
 
 
-
 
NC_006349  BMAA0519  GTP-dependent nucleic acid-binding protein EngD  53.66 
 
 
364 aa  364  1e-99  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3587  GTP-dependent nucleic acid-binding protein EngD  53.66 
 
 
364 aa  364  1e-99  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3596  GTP-dependent nucleic acid-binding protein EngD  53.66 
 
 
364 aa  364  1e-99  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_1524  GTP-dependent nucleic acid-binding protein EngD  51.76 
 
 
363 aa  364  1e-99  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_008835  BMA10229_0952  GTP-dependent nucleic acid-binding protein EngD  53.66 
 
 
364 aa  364  1e-99  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3569  GTP-dependent nucleic acid-binding protein EngD  53.66 
 
 
364 aa  364  1e-99  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1923  GTP-dependent nucleic acid-binding protein EngD  53.66 
 
 
364 aa  364  1e-99  Burkholderia mallei NCTC 10247  Bacteria  normal  0.264442  n/a   
 
 
-
 
NC_010508  Bcenmc03_0496  GTP-dependent nucleic acid-binding protein EngD  53.13 
 
 
364 aa  363  3e-99  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A3611  GTP-dependent nucleic acid-binding protein EngD  53.41 
 
 
364 aa  363  3e-99  Burkholderia sp. 383  Bacteria  normal  normal  0.850292 
 
 
-
 
NC_008060  Bcen_2581  GTP-dependent nucleic acid-binding protein EngD  53.13 
 
 
364 aa  363  3e-99  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0524  GTP-dependent nucleic acid-binding protein EngD  53.13 
 
 
364 aa  363  3e-99  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3733  GTP-dependent nucleic acid-binding protein EngD  53.12 
 
 
363 aa  362  4e-99  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.316822 
 
 
-
 
NC_010682  Rpic_3140  GTP-dependent nucleic acid-binding protein EngD  52.88 
 
 
364 aa  363  4e-99  Ralstonia pickettii 12J  Bacteria  normal  0.48249  normal  0.369877 
 
 
-
 
NC_011769  DvMF_0234  GTP-dependent nucleic acid-binding protein EngD  52.96 
 
 
366 aa  362  4e-99  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0453052 
 
 
-
 
NC_011663  Sbal223_1110  GTP-dependent nucleic acid-binding protein EngD  52.2 
 
 
363 aa  362  5.0000000000000005e-99  Shewanella baltica OS223  Bacteria  hitchhiker  0.000000114321  hitchhiker  0.00000000131179 
 
 
-
 
NC_009665  Shew185_3299  GTP-dependent nucleic acid-binding protein EngD  52.2 
 
 
363 aa  362  5.0000000000000005e-99  Shewanella baltica OS185  Bacteria  unclonable  0.0000000000459769  n/a   
 
 
-
 
NC_009997  Sbal195_3435  GTP-dependent nucleic acid-binding protein EngD  52.2 
 
 
363 aa  362  5.0000000000000005e-99  Shewanella baltica OS195  Bacteria  unclonable  0.000000360155  hitchhiker  0.00065537 
 
 
-
 
NC_008700  Sama_2571  GTP-dependent nucleic acid-binding protein EngD  51.64 
 
 
363 aa  361  8e-99  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00000069275  normal  0.128339 
 
 
-
 
NC_007484  Noc_0517  GTP-dependent nucleic acid-binding protein EngD  50.69 
 
 
362 aa  360  1e-98  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1574  GTP-dependent nucleic acid-binding protein EngD  54.45 
 
 
365 aa  361  1e-98  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.796627 
 
 
-
 
NC_007651  BTH_I2920  GTP-dependent nucleic acid-binding protein EngD  53.39 
 
 
364 aa  360  2e-98  Burkholderia thailandensis E264  Bacteria  normal  0.657058  n/a   
 
 
-
 
NC_010159  YpAngola_A2468  GTP-dependent nucleic acid-binding protein EngD  51.91 
 
 
363 aa  360  2e-98  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
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