More than 300 homologs were found in PanDaTox collection
for query gene Mkms_4178 on replicon NC_008705
Organism: Mycobacterium sp. KMS



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008705  Mkms_4178  GTP-dependent nucleic acid-binding protein EngD  100 
 
 
376 aa  759    Mycobacterium sp. KMS  Bacteria  normal  0.40111  normal 
 
 
-
 
NC_008146  Mmcs_4102  GTP-dependent nucleic acid-binding protein EngD  100 
 
 
376 aa  759    Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4333  GTP-dependent nucleic acid-binding protein EngD  99.73 
 
 
376 aa  758    Mycobacterium sp. JLS  Bacteria  normal  normal  0.567593 
 
 
-
 
NC_009338  Mflv_2082  GTP-dependent nucleic acid-binding protein EngD  92.68 
 
 
360 aa  641    Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.330246  normal  0.125841 
 
 
-
 
NC_008726  Mvan_4625  GTP-dependent nucleic acid-binding protein EngD  90.48 
 
 
360 aa  630  1e-179  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.54824  normal 
 
 
-
 
NC_009565  TBFG_11134  GTP-dependent nucleic acid-binding protein EngD  85.31 
 
 
357 aa  570  1e-161  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_31400  GTP-dependent nucleic acid-binding protein EngD  77.87 
 
 
360 aa  550  1e-155  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.292075 
 
 
-
 
NC_013441  Gbro_3392  GTP-binding protein YchF  80.06 
 
 
359 aa  543  1e-153  Gordonia bronchialis DSM 43247  Bacteria  normal  0.180575  n/a   
 
 
-
 
NC_013093  Amir_0736  GTP-dependent nucleic acid-binding protein EngD  79.21 
 
 
359 aa  542  1e-153  Actinosynnema mirum DSM 43827  Bacteria  normal  0.217905  n/a   
 
 
-
 
NC_013235  Namu_4365  GTP-dependent nucleic acid-binding protein EngD  80.9 
 
 
359 aa  538  9.999999999999999e-153  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3101  GTP-binding protein YchF  77.12 
 
 
357 aa  526  1e-148  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0473  GTP-dependent nucleic acid-binding protein EngD  70.91 
 
 
364 aa  508  1e-143  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2831  GTP-dependent nucleic acid-binding protein EngD  70.64 
 
 
368 aa  511  1e-143  Arthrobacter sp. FB24  Bacteria  normal  0.593989  n/a   
 
 
-
 
NC_013131  Caci_8269  GTP-dependent nucleic acid-binding protein EngD  70.06 
 
 
357 aa  509  1e-143  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2546  GTP-dependent nucleic acid-binding protein EngD  70.67 
 
 
363 aa  504  9.999999999999999e-143  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000002151 
 
 
-
 
NC_009664  Krad_1124  GTP-dependent nucleic acid-binding protein EngD  74.86 
 
 
361 aa  504  9.999999999999999e-143  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.356013 
 
 
-
 
NC_013510  Tcur_1095  GTP-binding protein YchF  71.75 
 
 
363 aa  499  1e-140  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0537245  n/a   
 
 
-
 
NC_012669  Bcav_1105  GTP-dependent nucleic acid-binding protein EngD  70.39 
 
 
361 aa  496  1e-139  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.692178 
 
 
-
 
NC_014210  Ndas_0133  GTP-binding protein YchF  69.55 
 
 
361 aa  494  1e-139  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8476  GTP-binding protein YchF  69.36 
 
 
362 aa  494  1e-139  Streptosporangium roseum DSM 43021  Bacteria  normal  0.775953  normal 
 
 
-
 
NC_013530  Xcel_0946  GTP-binding protein YchF  68.52 
 
 
361 aa  495  1e-139  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0977  GTP-binding protein YchF  72.96 
 
 
358 aa  496  1e-139  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.245774  hitchhiker  0.00114943 
 
 
-
 
NC_013947  Snas_5521  GTP-binding protein YchF  71.59 
 
 
358 aa  494  9.999999999999999e-139  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.633913  normal  0.842427 
 
 
-
 
NC_013521  Sked_26380  GTP-binding protein YchF  69.83 
 
 
361 aa  493  9.999999999999999e-139  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0845459 
 
 
-
 
NC_008578  Acel_1861  GTP-dependent nucleic acid-binding protein EngD  69.17 
 
 
373 aa  490  1e-137  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.924801 
 
 
-
 
NC_013174  Jden_0748  GTP-dependent nucleic acid-binding protein EngD  68.52 
 
 
369 aa  487  1e-136  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4160  GTP-dependent nucleic acid-binding protein EngD  71.23 
 
 
361 aa  485  1e-136  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000134834 
 
 
-
 
NC_013169  Ksed_20210  GTP-dependent nucleic acid-binding protein EngD  71.79 
 
 
361 aa  485  1e-136  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.640353  normal  0.191287 
 
 
-
 
NC_013757  Gobs_1033  GTP-binding protein YchF  73.16 
 
 
357 aa  483  1e-135  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_3781  GTP-dependent nucleic acid-binding protein EngD  69.83 
 
 
361 aa  480  1e-134  Salinispora tropica CNB-440  Bacteria  normal  normal  0.699286 
 
 
-
 
NC_007777  Francci3_3871  GTP-dependent nucleic acid-binding protein EngD  70.7 
 
 
358 aa  478  1e-134  Frankia sp. CcI3  Bacteria  normal  0.479028  normal 
 
 
-
 
NC_013172  Bfae_22930  GTP-dependent nucleic acid-binding protein EngD  67.6 
 
 
361 aa  480  1e-134  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3062  GTP-binding protein YchF  69.92 
 
 
362 aa  477  1e-133  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0857  GTP-dependent nucleic acid-binding protein EngD  69.86 
 
 
358 aa  471  1e-132  Frankia sp. EAN1pec  Bacteria  normal  0.0266679  normal  0.117665 
 
 
-
 
NC_012803  Mlut_16190  GTP-dependent nucleic acid-binding protein EngD  72.08 
 
 
354 aa  468  1.0000000000000001e-131  Micrococcus luteus NCTC 2665  Bacteria  normal  0.938895  n/a   
 
 
-
 
NC_008699  Noca_1080  GTP-dependent nucleic acid-binding protein EngD  67.32 
 
 
359 aa  464  1e-129  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0648  GTP-binding protein YchF  64.62 
 
 
362 aa  460  9.999999999999999e-129  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.379901 
 
 
-
 
NC_010816  BLD_0667  GTP-dependent nucleic acid-binding protein EngD  63.79 
 
 
364 aa  442  1e-123  Bifidobacterium longum DJO10A  Bacteria  normal  0.416643  n/a   
 
 
-
 
NC_013203  Apar_0186  GTP-binding protein YchF  57.14 
 
 
354 aa  392  1e-108  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.448936 
 
 
-
 
NC_008740  Maqu_2368  GTP-dependent nucleic acid-binding protein EngD  53.61 
 
 
363 aa  376  1e-103  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_11960  GTP-binding protein YchF  55.74 
 
 
354 aa  374  1e-102  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.642415  normal 
 
 
-
 
NC_013173  Dbac_0442  GTP-binding protein YchF  54.7 
 
 
366 aa  371  1e-101  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.637193  n/a   
 
 
-
 
NC_013422  Hneap_1171  GTP-binding protein YchF  51.93 
 
 
364 aa  370  1e-101  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1647  GTP-dependent nucleic acid-binding protein EngD  53.87 
 
 
366 aa  368  1e-100  Desulfovibrio vulgaris DP4  Bacteria  normal  0.429909  normal  0.918011 
 
 
-
 
NC_007404  Tbd_0390  GTP-dependent nucleic acid-binding protein EngD  54.87 
 
 
363 aa  364  1e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.997224  normal  0.0213751 
 
 
-
 
NC_010524  Lcho_0271  GTP-binding protein YchF  53.61 
 
 
364 aa  363  2e-99  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.198016 
 
 
-
 
NC_010338  Caul_0708  GTP-dependent nucleic acid-binding protein EngD  52.34 
 
 
366 aa  363  4e-99  Caulobacter sp. K31  Bacteria  normal  0.965008  normal 
 
 
-
 
NC_007347  Reut_A3037  GTP-dependent nucleic acid-binding protein EngD  55.43 
 
 
387 aa  362  6e-99  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1574  GTP-dependent nucleic acid-binding protein EngD  54.12 
 
 
365 aa  362  7.0000000000000005e-99  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.796627 
 
 
-
 
NC_007498  Pcar_2000  GTP-dependent nucleic acid-binding protein EngD  51.25 
 
 
364 aa  360  2e-98  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0365484  n/a   
 
 
-
 
NC_008825  Mpe_A3166  putative GTP-binding protein  53.33 
 
 
364 aa  360  2e-98  Methylibium petroleiphilum PM1  Bacteria  normal  hitchhiker  0.00563466 
 
 
-
 
NC_011901  Tgr7_0530  GTP-dependent nucleic acid-binding protein EngD  53.74 
 
 
363 aa  360  2e-98  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1055  GTP-binding protein YchF  54.04 
 
 
354 aa  360  3e-98  Eggerthella lenta DSM 2243  Bacteria  normal  0.0763151  hitchhiker  0.00159487 
 
 
-
 
NC_007973  Rmet_3193  GTP-dependent nucleic acid-binding protein EngD  55.71 
 
 
363 aa  360  3e-98  Cupriavidus metallidurans CH34  Bacteria  normal  0.36162  normal 
 
 
-
 
NC_008254  Meso_2159  GTP-dependent nucleic acid-binding protein EngD  52.17 
 
 
367 aa  358  8e-98  Chelativorans sp. BNC1  Bacteria  normal  0.470887  n/a   
 
 
-
 
NC_007520  Tcr_0395  GTP-dependent nucleic acid-binding protein EngD  52.91 
 
 
363 aa  358  9e-98  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00186596  n/a   
 
 
-
 
NC_013411  GYMC61_3547  GTP-dependent nucleic acid-binding protein EngD  50.55 
 
 
366 aa  357  9.999999999999999e-98  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008309  HS_0503  GTP-dependent nucleic acid-binding protein EngD  51.67 
 
 
363 aa  358  9.999999999999999e-98  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0234  GTP-dependent nucleic acid-binding protein EngD  52.05 
 
 
366 aa  357  1.9999999999999998e-97  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0453052 
 
 
-
 
NC_011989  Avi_3194  GTP-dependent nucleic acid-binding protein EngD  52.45 
 
 
367 aa  357  1.9999999999999998e-97  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_21870  GTP-binding protein YchF  53.22 
 
 
354 aa  356  2.9999999999999997e-97  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.0475417 
 
 
-
 
NC_008782  Ajs_3618  GTP-binding protein YchF  52.5 
 
 
364 aa  355  8.999999999999999e-97  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2928  GTP-binding protein YchF  52.5 
 
 
364 aa  355  8.999999999999999e-97  Acidovorax ebreus TPSY  Bacteria  normal  0.79075  n/a   
 
 
-
 
NC_010320  Teth514_2022  GTP-dependent nucleic acid-binding protein EngD  51.11 
 
 
363 aa  354  1e-96  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA2032  GTP-dependent nucleic acid-binding protein EngD  53.06 
 
 
363 aa  354  2e-96  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4635  GTP-dependent nucleic acid-binding protein EngD  53.76 
 
 
363 aa  353  2e-96  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0877  GTP-dependent nucleic acid-binding protein EngD  50.97 
 
 
364 aa  354  2e-96  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00007173  n/a   
 
 
-
 
NC_007802  Jann_3582  GTP-dependent nucleic acid-binding protein EngD  52.75 
 
 
365 aa  354  2e-96  Jannaschia sp. CCS1  Bacteria  normal  0.216393  normal 
 
 
-
 
NC_007604  Synpcc7942_0554  GTP-dependent nucleic acid-binding protein EngD  53.76 
 
 
363 aa  353  2.9999999999999997e-96  Synechococcus elongatus PCC 7942  Bacteria  normal  0.268556  normal 
 
 
-
 
NC_011884  Cyan7425_4263  GTP-dependent nucleic acid-binding protein EngD  53.44 
 
 
363 aa  353  2.9999999999999997e-96  Cyanothece sp. PCC 7425  Bacteria  normal  0.109438  normal  0.19312 
 
 
-
 
NC_012793  GWCH70_3418  GTP-dependent nucleic acid-binding protein EngD  50 
 
 
366 aa  353  4e-96  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000016062  n/a   
 
 
-
 
NC_012918  GM21_1475  GTP-dependent nucleic acid-binding protein EngD  51.52 
 
 
364 aa  353  4e-96  Geobacter sp. M21  Bacteria  n/a    normal  0.0116591 
 
 
-
 
NC_010531  Pnec_0155  GTP-binding protein YchF  52.07 
 
 
364 aa  352  5e-96  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.611358  normal  0.940592 
 
 
-
 
NC_011146  Gbem_2765  GTP-dependent nucleic acid-binding protein EngD  51.25 
 
 
364 aa  352  5e-96  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3035  GTP-dependent nucleic acid-binding protein EngD  50.94 
 
 
367 aa  352  5.9999999999999994e-96  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0832  GTP-dependent nucleic acid-binding protein EngD  52.21 
 
 
365 aa  352  7e-96  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.596144  n/a   
 
 
-
 
NC_006368  lpp2707  GTP-dependent nucleic acid-binding protein EngD  51.67 
 
 
363 aa  352  8e-96  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A5602  GTP-dependent nucleic acid-binding protein EngD  50.82 
 
 
366 aa  351  1e-95  Bacillus cereus B4264  Bacteria  normal  0.0104876  n/a   
 
 
-
 
NC_007298  Daro_3733  GTP-dependent nucleic acid-binding protein EngD  53.48 
 
 
363 aa  351  1e-95  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.316822 
 
 
-
 
NC_009049  Rsph17029_2490  GTP-dependent nucleic acid-binding protein EngD  51.93 
 
 
365 aa  351  1e-95  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.071382  normal 
 
 
-
 
NC_008752  Aave_0887  GTP-binding protein YchF  52.78 
 
 
364 aa  351  1e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0231852  normal  0.589868 
 
 
-
 
NC_007947  Mfla_0675  GTP-dependent nucleic acid-binding protein EngD  51.4 
 
 
361 aa  351  1e-95  Methylobacillus flagellatus KT  Bacteria  normal  0.762559  normal 
 
 
-
 
NC_009632  SaurJH1_0422  GTP-dependent nucleic acid-binding protein EngD  50.14 
 
 
365 aa  351  1e-95  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0242427  n/a   
 
 
-
 
NC_009487  SaurJH9_0411  GTP-dependent nucleic acid-binding protein EngD  50.14 
 
 
365 aa  351  1e-95  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00200515  n/a   
 
 
-
 
NC_009952  Dshi_0954  GTP-dependent nucleic acid-binding protein EngD  52.08 
 
 
365 aa  351  1e-95  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_4015  GTP-dependent nucleic acid-binding protein EngD  50 
 
 
366 aa  350  2e-95  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.362655  n/a   
 
 
-
 
NC_007484  Noc_0517  GTP-dependent nucleic acid-binding protein EngD  51.25 
 
 
362 aa  350  2e-95  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1534  GTP-binding protein YchF  53.31 
 
 
364 aa  350  2e-95  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.452605 
 
 
-
 
NC_011772  BCG9842_B5333  GTP-dependent nucleic acid-binding protein EngD  50.55 
 
 
366 aa  350  2e-95  Bacillus cereus G9842  Bacteria  hitchhiker  0.000128538  hitchhiker  0.000000465437 
 
 
-
 
NC_003909  BCE_5626  GTP-dependent nucleic acid-binding protein EngD  50.55 
 
 
366 aa  350  3e-95  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000871672  n/a   
 
 
-
 
NC_010551  BamMC406_0453  GTP-dependent nucleic acid-binding protein EngD  52.49 
 
 
364 aa  350  3e-95  Burkholderia ambifaria MC40-6  Bacteria  normal  0.660955  normal  0.0338644 
 
 
-
 
NC_006369  lpl2579  GTP-dependent nucleic acid-binding protein EngD  51.39 
 
 
363 aa  350  3e-95  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010084  Bmul_2871  GTP-dependent nucleic acid-binding protein EngD  52.5 
 
 
364 aa  350  3e-95  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.103234  normal  0.491395 
 
 
-
 
NC_011004  Rpal_4838  GTP-dependent nucleic acid-binding protein EngD  52.21 
 
 
365 aa  350  3e-95  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0348  GTP-dependent nucleic acid-binding protein EngD  53.59 
 
 
365 aa  350  3e-95  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.079313  normal 
 
 
-
 
NC_008390  Bamb_0429  GTP-dependent nucleic acid-binding protein EngD  52.49 
 
 
364 aa  350  3e-95  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_0005  GTP-dependent nucleic acid-binding protein EngD  51.36 
 
 
371 aa  350  3e-95  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3140  GTP-dependent nucleic acid-binding protein EngD  52.22 
 
 
364 aa  350  3e-95  Ralstonia pickettii 12J  Bacteria  normal  0.48249  normal  0.369877 
 
 
-
 
NC_011662  Tmz1t_3631  GTP-dependent nucleic acid-binding protein EngD  53.74 
 
 
363 aa  349  4e-95  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_2771  GTP-dependent nucleic acid-binding protein EngD  50.4 
 
 
367 aa  349  4e-95  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
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