More than 300 homologs were found in PanDaTox collection
for query gene Ksed_20210 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_20210  GTP-dependent nucleic acid-binding protein EngD  100 
 
 
361 aa  725    Kytococcus sedentarius DSM 20547  Bacteria  normal  0.640353  normal  0.191287 
 
 
-
 
NC_013521  Sked_26380  GTP-binding protein YchF  73.41 
 
 
361 aa  531  1e-150  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0845459 
 
 
-
 
NC_013174  Jden_0748  GTP-dependent nucleic acid-binding protein EngD  72.3 
 
 
369 aa  525  1e-148  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0977  GTP-binding protein YchF  75.35 
 
 
358 aa  523  1e-147  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.245774  hitchhiker  0.00114943 
 
 
-
 
NC_013530  Xcel_0946  GTP-binding protein YchF  71.75 
 
 
361 aa  520  1e-146  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_31400  GTP-dependent nucleic acid-binding protein EngD  71.35 
 
 
360 aa  515  1.0000000000000001e-145  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.292075 
 
 
-
 
NC_013093  Amir_0736  GTP-dependent nucleic acid-binding protein EngD  74.24 
 
 
359 aa  515  1.0000000000000001e-145  Actinosynnema mirum DSM 43827  Bacteria  normal  0.217905  n/a   
 
 
-
 
NC_013441  Gbro_3392  GTP-binding protein YchF  73.13 
 
 
359 aa  517  1.0000000000000001e-145  Gordonia bronchialis DSM 43247  Bacteria  normal  0.180575  n/a   
 
 
-
 
NC_012669  Bcav_1105  GTP-dependent nucleic acid-binding protein EngD  71.75 
 
 
361 aa  512  1e-144  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.692178 
 
 
-
 
NC_014210  Ndas_0133  GTP-binding protein YchF  70.88 
 
 
361 aa  511  1e-144  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2831  GTP-dependent nucleic acid-binding protein EngD  71.75 
 
 
368 aa  511  1e-144  Arthrobacter sp. FB24  Bacteria  normal  0.593989  n/a   
 
 
-
 
NC_013172  Bfae_22930  GTP-dependent nucleic acid-binding protein EngD  70.75 
 
 
361 aa  509  1e-143  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1095  GTP-binding protein YchF  70.8 
 
 
363 aa  506  9.999999999999999e-143  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0537245  n/a   
 
 
-
 
NC_011886  Achl_2546  GTP-dependent nucleic acid-binding protein EngD  70.64 
 
 
363 aa  502  1e-141  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000002151 
 
 
-
 
NC_007333  Tfu_0473  GTP-dependent nucleic acid-binding protein EngD  69.51 
 
 
364 aa  499  1e-140  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8269  GTP-dependent nucleic acid-binding protein EngD  68.42 
 
 
357 aa  499  1e-140  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0648  GTP-binding protein YchF  66.57 
 
 
362 aa  500  1e-140  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.379901 
 
 
-
 
NC_009338  Mflv_2082  GTP-dependent nucleic acid-binding protein EngD  72.02 
 
 
360 aa  496  1e-139  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.330246  normal  0.125841 
 
 
-
 
NC_013595  Sros_8476  GTP-binding protein YchF  67.96 
 
 
362 aa  497  1e-139  Streptosporangium roseum DSM 43021  Bacteria  normal  0.775953  normal 
 
 
-
 
NC_013235  Namu_4365  GTP-dependent nucleic acid-binding protein EngD  73.41 
 
 
359 aa  496  1e-139  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3101  GTP-binding protein YchF  71.47 
 
 
357 aa  496  1e-139  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4160  GTP-dependent nucleic acid-binding protein EngD  70.36 
 
 
361 aa  491  9.999999999999999e-139  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000134834 
 
 
-
 
NC_008726  Mvan_4625  GTP-dependent nucleic acid-binding protein EngD  72.02 
 
 
360 aa  491  9.999999999999999e-139  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.54824  normal 
 
 
-
 
NC_009077  Mjls_4333  GTP-dependent nucleic acid-binding protein EngD  71.51 
 
 
376 aa  488  1e-137  Mycobacterium sp. JLS  Bacteria  normal  normal  0.567593 
 
 
-
 
NC_008146  Mmcs_4102  GTP-dependent nucleic acid-binding protein EngD  71.79 
 
 
376 aa  489  1e-137  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1124  GTP-dependent nucleic acid-binding protein EngD  73.96 
 
 
361 aa  490  1e-137  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.356013 
 
 
-
 
NC_008705  Mkms_4178  GTP-dependent nucleic acid-binding protein EngD  71.79 
 
 
376 aa  489  1e-137  Mycobacterium sp. KMS  Bacteria  normal  0.40111  normal 
 
 
-
 
NC_009380  Strop_3781  GTP-dependent nucleic acid-binding protein EngD  68.98 
 
 
361 aa  486  1e-136  Salinispora tropica CNB-440  Bacteria  normal  normal  0.699286 
 
 
-
 
NC_010816  BLD_0667  GTP-dependent nucleic acid-binding protein EngD  65.75 
 
 
364 aa  482  1e-135  Bifidobacterium longum DJO10A  Bacteria  normal  0.416643  n/a   
 
 
-
 
NC_008699  Noca_1080  GTP-dependent nucleic acid-binding protein EngD  69.06 
 
 
359 aa  484  1e-135  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3062  GTP-binding protein YchF  66.85 
 
 
362 aa  479  1e-134  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1033  GTP-binding protein YchF  70.64 
 
 
357 aa  474  1e-133  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5521  GTP-binding protein YchF  68.06 
 
 
358 aa  474  1e-133  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.633913  normal  0.842427 
 
 
-
 
NC_008578  Acel_1861  GTP-dependent nucleic acid-binding protein EngD  66.76 
 
 
373 aa  476  1e-133  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.924801 
 
 
-
 
NC_012803  Mlut_16190  GTP-dependent nucleic acid-binding protein EngD  72.32 
 
 
354 aa  469  1.0000000000000001e-131  Micrococcus luteus NCTC 2665  Bacteria  normal  0.938895  n/a   
 
 
-
 
NC_007777  Francci3_3871  GTP-dependent nucleic acid-binding protein EngD  66.76 
 
 
358 aa  468  1.0000000000000001e-131  Frankia sp. CcI3  Bacteria  normal  0.479028  normal 
 
 
-
 
NC_009565  TBFG_11134  GTP-dependent nucleic acid-binding protein EngD  69.81 
 
 
357 aa  464  9.999999999999999e-131  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0857  GTP-dependent nucleic acid-binding protein EngD  66.2 
 
 
358 aa  464  1e-129  Frankia sp. EAN1pec  Bacteria  normal  0.0266679  normal  0.117665 
 
 
-
 
NC_013204  Elen_1055  GTP-binding protein YchF  57.42 
 
 
354 aa  397  1e-109  Eggerthella lenta DSM 2243  Bacteria  normal  0.0763151  hitchhiker  0.00159487 
 
 
-
 
NC_013170  Ccur_11960  GTP-binding protein YchF  57.69 
 
 
354 aa  396  1e-109  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.642415  normal 
 
 
-
 
NC_013165  Shel_21870  GTP-binding protein YchF  56.47 
 
 
354 aa  388  1e-107  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.0475417 
 
 
-
 
NC_013203  Apar_0186  GTP-binding protein YchF  56.28 
 
 
354 aa  389  1e-107  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.448936 
 
 
-
 
NC_002976  SERP0041  GTP-dependent nucleic acid-binding protein EngD  53.23 
 
 
365 aa  379  1e-104  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0411  GTP-dependent nucleic acid-binding protein EngD  54.13 
 
 
365 aa  381  1e-104  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00200515  n/a   
 
 
-
 
NC_010338  Caul_0708  GTP-dependent nucleic acid-binding protein EngD  54.45 
 
 
366 aa  378  1e-104  Caulobacter sp. K31  Bacteria  normal  0.965008  normal 
 
 
-
 
NC_008340  Mlg_0286  GTP-binding protein YchF  55.46 
 
 
363 aa  379  1e-104  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.79515 
 
 
-
 
NC_008528  OEOE_0117  GTPase, translation factor  52.56 
 
 
367 aa  379  1e-104  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0422  GTP-dependent nucleic acid-binding protein EngD  54.13 
 
 
365 aa  381  1e-104  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0242427  n/a   
 
 
-
 
NC_003909  BCE_5626  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
366 aa  375  1e-103  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000871672  n/a   
 
 
-
 
NC_005945  BAS5328  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
366 aa  375  1e-103  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00440809  n/a   
 
 
-
 
NC_005957  BT9727_5156  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
366 aa  375  1e-103  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.474948  n/a   
 
 
-
 
NC_006274  BCZK5172  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
366 aa  375  1e-103  Bacillus cereus E33L  Bacteria  decreased coverage  0.000341574  n/a   
 
 
-
 
NC_006368  lpp2707  GTP-dependent nucleic acid-binding protein EngD  53.3 
 
 
363 aa  375  1e-103  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2579  GTP-dependent nucleic acid-binding protein EngD  53.57 
 
 
363 aa  377  1e-103  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007347  Reut_A3037  GTP-dependent nucleic acid-binding protein EngD  55.46 
 
 
387 aa  375  1e-103  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0530  GTP-dependent nucleic acid-binding protein EngD  54.5 
 
 
363 aa  376  1e-103  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5724  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
366 aa  375  1e-103  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.000153579  n/a   
 
 
-
 
NC_010001  Cphy_2482  GTP-binding protein YchF  53.78 
 
 
365 aa  377  1e-103  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1521  GTP-dependent nucleic acid-binding protein EngD  54.05 
 
 
363 aa  376  1e-103  Chromohalobacter salexigens DSM 3043  Bacteria  hitchhiker  0.00078802  n/a   
 
 
-
 
NC_009674  Bcer98_4015  GTP-dependent nucleic acid-binding protein EngD  52.96 
 
 
366 aa  376  1e-103  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.362655  n/a   
 
 
-
 
NC_011773  BCAH820_5585  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
366 aa  375  1e-103  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000269 
 
 
-
 
NC_011658  BCAH187_A5663  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
366 aa  375  1e-103  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000189692  n/a   
 
 
-
 
NC_008531  LEUM_0349  GTPase, translation factor  54.4 
 
 
366 aa  376  1e-103  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_0005  GTP-dependent nucleic acid-binding protein EngD  53.05 
 
 
371 aa  375  1e-103  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5333  GTP-dependent nucleic acid-binding protein EngD  53.26 
 
 
366 aa  372  1e-102  Bacillus cereus G9842  Bacteria  hitchhiker  0.000128538  hitchhiker  0.000000465437 
 
 
-
 
NC_007484  Noc_0517  GTP-dependent nucleic acid-binding protein EngD  53.39 
 
 
362 aa  372  1e-102  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5602  GTP-dependent nucleic acid-binding protein EngD  53.53 
 
 
366 aa  374  1e-102  Bacillus cereus B4264  Bacteria  normal  0.0104876  n/a   
 
 
-
 
NC_008740  Maqu_2368  GTP-dependent nucleic acid-binding protein EngD  52.59 
 
 
363 aa  372  1e-102  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_3030  GTP-dependent nucleic acid-binding protein EngD  55.22 
 
 
363 aa  369  1e-101  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2898  GTP-dependent nucleic acid-binding protein EngD  53.51 
 
 
364 aa  370  1e-101  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0390  GTP-dependent nucleic acid-binding protein EngD  55.28 
 
 
363 aa  370  1e-101  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.997224  normal  0.0213751 
 
 
-
 
NC_007406  Nwi_2510  GTP-dependent nucleic acid-binding protein EngD  53.13 
 
 
365 aa  368  1e-101  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.566797  normal  0.501348 
 
 
-
 
NC_009012  Cthe_0877  GTP-dependent nucleic acid-binding protein EngD  52.57 
 
 
364 aa  370  1e-101  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00007173  n/a   
 
 
-
 
NC_013411  GYMC61_3547  GTP-dependent nucleic acid-binding protein EngD  52.45 
 
 
366 aa  368  1e-101  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011726  PCC8801_3090  GTP-dependent nucleic acid-binding protein EngD  55.22 
 
 
363 aa  369  1e-101  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013223  Dret_1390  GTP-binding protein YchF  54.05 
 
 
367 aa  370  1e-101  Desulfohalobium retbaense DSM 5692  Bacteria  decreased coverage  0.00313988  normal  0.853679 
 
 
-
 
NC_007973  Rmet_3193  GTP-dependent nucleic acid-binding protein EngD  55.19 
 
 
363 aa  371  1e-101  Cupriavidus metallidurans CH34  Bacteria  normal  0.36162  normal 
 
 
-
 
NC_008309  HS_0503  GTP-dependent nucleic acid-binding protein EngD  52.97 
 
 
363 aa  370  1e-101  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1008  GTP-dependent nucleic acid-binding protein EngD  53.57 
 
 
363 aa  369  1e-101  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000000208433  normal  0.179939 
 
 
-
 
NC_008322  Shewmr7_1073  GTP-dependent nucleic acid-binding protein EngD  53.57 
 
 
363 aa  369  1e-101  Shewanella sp. MR-7  Bacteria  unclonable  0.00000596539  normal  0.137935 
 
 
-
 
NC_011138  MADE_02583  GTP-dependent nucleic acid-binding protein EngD  51.77 
 
 
363 aa  369  1e-101  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.0000898424  n/a   
 
 
-
 
NC_008577  Shewana3_1012  GTP-dependent nucleic acid-binding protein EngD  53.57 
 
 
363 aa  369  1e-101  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00042531  normal  0.0638456 
 
 
-
 
NC_008751  Dvul_1647  GTP-dependent nucleic acid-binding protein EngD  53.95 
 
 
366 aa  370  1e-101  Desulfovibrio vulgaris DP4  Bacteria  normal  0.429909  normal  0.918011 
 
 
-
 
NC_008789  Hhal_0986  GTP-binding protein YchF  52.86 
 
 
363 aa  370  1e-101  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0006  GTP-dependent nucleic acid-binding protein EngD  52.13 
 
 
371 aa  367  1e-100  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2043  GTP-dependent nucleic acid-binding protein EngD  50.82 
 
 
363 aa  365  1e-100  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1909  GTP-dependent nucleic acid-binding protein EngD  53.95 
 
 
363 aa  365  1e-100  Psychrobacter sp. PRwf-1  Bacteria  normal  0.186477  normal 
 
 
-
 
NC_010682  Rpic_3140  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
364 aa  366  1e-100  Ralstonia pickettii 12J  Bacteria  normal  0.48249  normal  0.369877 
 
 
-
 
NC_007614  Nmul_A0592  GTP-dependent nucleic acid-binding protein EngD  54.22 
 
 
367 aa  367  1e-100  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.269932  n/a   
 
 
-
 
NC_009513  Lreu_0109  GTP-dependent nucleic acid-binding protein EngD  52.67 
 
 
365 aa  366  1e-100  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.0000802684  n/a   
 
 
-
 
NC_011883  Ddes_0946  GTP-dependent nucleic acid-binding protein EngD  53.41 
 
 
367 aa  367  1e-100  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3418  GTP-dependent nucleic acid-binding protein EngD  51.35 
 
 
366 aa  367  1e-100  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000016062  n/a   
 
 
-
 
NC_008254  Meso_2159  GTP-dependent nucleic acid-binding protein EngD  52.3 
 
 
367 aa  366  1e-100  Chelativorans sp. BNC1  Bacteria  normal  0.470887  n/a   
 
 
-
 
NC_009727  CBUD_0072  GTP-dependent nucleic acid-binding protein EngD  50.82 
 
 
367 aa  365  1e-100  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3435  GTP-dependent nucleic acid-binding protein EngD  53.13 
 
 
363 aa  364  1e-99  Shewanella baltica OS195  Bacteria  unclonable  0.000000360155  hitchhiker  0.00065537 
 
 
-
 
NC_009665  Shew185_3299  GTP-dependent nucleic acid-binding protein EngD  53.13 
 
 
363 aa  364  1e-99  Shewanella baltica OS185  Bacteria  unclonable  0.0000000000459769  n/a   
 
 
-
 
NC_007520  Tcr_0395  GTP-dependent nucleic acid-binding protein EngD  52.88 
 
 
363 aa  364  1e-99  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00186596  n/a   
 
 
-
 
NC_009052  Sbal_3257  GTP-dependent nucleic acid-binding protein EngD  53.13 
 
 
363 aa  364  1e-99  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000000720126  n/a   
 
 
-
 
NC_011663  Sbal223_1110  GTP-dependent nucleic acid-binding protein EngD  53.13 
 
 
363 aa  364  1e-99  Shewanella baltica OS223  Bacteria  hitchhiker  0.000000114321  hitchhiker  0.00000000131179 
 
 
-
 
NC_008700  Sama_2571  GTP-dependent nucleic acid-binding protein EngD  53.02 
 
 
363 aa  364  1e-99  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00000069275  normal  0.128339 
 
 
-
 
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