Gene Csal_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1521 
Symbol 
ID4029222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1733525 
End bp1734616 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content63% 
IMG OID637966709 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_573573 
Protein GI92113645 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00078802 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTCA ATTGCGGTAT CGTCGGCCTT CCCAATGTCG GCAAATCCAC GCTGTTCAAT 
GCCTTGACCA AATCGGGAAT CGACGCCGAA AACTTTCCTT TCTGCACCAT CGAACCCAAC
GTGGGCATCG TGCCCATGCC GGACCCGCGT CTGGACAAGC TCGCGGCGAT CGTCAAGCCG
GAAAAGGTGA TCCCGACGAC CATGGAGTTC GTGGATATCG CCGGCCTGGT CGCCGGGGCA
TCCAAGGGGG AAGGCCTGGG CAACCAGTTC CTGGCCAATA TCCGCGAAAC CCAGGCGATC
GCGCATGTCG TGCGCTGCTT CGACAATGAC AACGTCATCC ACGTCGCCAA TCAGGTCGAT
CCGCGCGCCG ATATCGAGAC CATCAATCTG GAGCTTGCCC TGGCCGACCT GGATACCGTG
GAACGCGCCA TCCAGCGTCT GGCGCGCGTG GTCAAGGGCG GCGACAAGGA CGCCATGGCC
ACCAAGGCCA TTCTCGACCG CATCCAGCCG CACCTCGCCG AGGGCCAGCC GCTGCGCAGC
TTCGGCCTCG ACGCGGACGA GACGCGCCAG CTCAAGAGCT TCGGCTTCTT GACCCTGAAG
CCCACCATGT ACATCGCCAA CGTCAACGAA GACGGGTTCG ACAACAACCC CTACCTCGAC
GTGGTCAATG ACATCGCGCG CGAGGAAGGC GCCGTGGTGG TCCCGGTGTG CAACCAGATC
GAGGCCGAAA TCGCCGAGCT CGACGAAGAA GAACGCAGCG TCTTCCTCGA GGAGATGGGC
ATGGAAGAGC CCGGCCTGGA CCGCGTCATC CGCGCCGGCT ATGACCTGCT CGGCCTGCAG
ACCTACTTCA CCGCCGGCGT GAAGGAAGTC CGCGCCTGGA CCGTCAAGCA AGGTGCCACC
GCCCCGGAAG CCGCCGGCGC GATCCACACC GACTTCCAGA AGGGCTTCAT TCGTGCCGAG
GTGGTCGGCT ACGAAGACTT CGTGGCCCTG GGGGGCGAGC AAGGCGCCAA GGACGCGGGC
AAATGGCGTC TGGAAGGCAA GGATTACGTG GTCGCCGACG GCGATGTCGT GCACTTCCGT
TTCAACGTCT AG
 
Protein sequence
MGFNCGIVGL PNVGKSTLFN ALTKSGIDAE NFPFCTIEPN VGIVPMPDPR LDKLAAIVKP 
EKVIPTTMEF VDIAGLVAGA SKGEGLGNQF LANIRETQAI AHVVRCFDND NVIHVANQVD
PRADIETINL ELALADLDTV ERAIQRLARV VKGGDKDAMA TKAILDRIQP HLAEGQPLRS
FGLDADETRQ LKSFGFLTLK PTMYIANVNE DGFDNNPYLD VVNDIAREEG AVVVPVCNQI
EAEIAELDEE ERSVFLEEMG MEEPGLDRVI RAGYDLLGLQ TYFTAGVKEV RAWTVKQGAT
APEAAGAIHT DFQKGFIRAE VVGYEDFVAL GGEQGAKDAG KWRLEGKDYV VADGDVVHFR
FNV