More than 300 homologs were found in PanDaTox collection
for query gene Sros_8476 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_8476  GTP-binding protein YchF  100 
 
 
362 aa  722    Streptosporangium roseum DSM 43021  Bacteria  normal  0.775953  normal 
 
 
-
 
NC_014165  Tbis_3062  GTP-binding protein YchF  83.15 
 
 
362 aa  600  1e-170  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1095  GTP-binding protein YchF  81.04 
 
 
363 aa  583  1.0000000000000001e-165  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0537245  n/a   
 
 
-
 
NC_013131  Caci_8269  GTP-dependent nucleic acid-binding protein EngD  75.14 
 
 
357 aa  550  1e-155  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0473  GTP-dependent nucleic acid-binding protein EngD  74.79 
 
 
364 aa  546  1e-154  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0133  GTP-binding protein YchF  75.34 
 
 
361 aa  545  1e-154  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_26380  GTP-binding protein YchF  72.1 
 
 
361 aa  517  1.0000000000000001e-145  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0845459 
 
 
-
 
NC_013174  Jden_0748  GTP-dependent nucleic acid-binding protein EngD  70.72 
 
 
369 aa  515  1.0000000000000001e-145  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4160  GTP-dependent nucleic acid-binding protein EngD  73.76 
 
 
361 aa  515  1.0000000000000001e-145  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000134834 
 
 
-
 
NC_009380  Strop_3781  GTP-dependent nucleic acid-binding protein EngD  72.93 
 
 
361 aa  511  1e-144  Salinispora tropica CNB-440  Bacteria  normal  normal  0.699286 
 
 
-
 
NC_013159  Svir_31400  GTP-dependent nucleic acid-binding protein EngD  71.35 
 
 
360 aa  508  1e-143  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.292075 
 
 
-
 
NC_013530  Xcel_0946  GTP-binding protein YchF  69.06 
 
 
361 aa  503  1e-141  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5521  GTP-binding protein YchF  71.19 
 
 
358 aa  500  1e-140  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.633913  normal  0.842427 
 
 
-
 
NC_008699  Noca_1080  GTP-dependent nucleic acid-binding protein EngD  71.63 
 
 
359 aa  500  1e-140  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_22930  GTP-dependent nucleic acid-binding protein EngD  68.06 
 
 
361 aa  498  1e-139  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_1033  GTP-binding protein YchF  72.65 
 
 
357 aa  495  1e-139  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1861  GTP-dependent nucleic acid-binding protein EngD  69.02 
 
 
373 aa  495  1e-139  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.924801 
 
 
-
 
NC_014151  Cfla_0977  GTP-binding protein YchF  70.44 
 
 
358 aa  488  1e-137  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.245774  hitchhiker  0.00114943 
 
 
-
 
NC_009921  Franean1_0857  GTP-dependent nucleic acid-binding protein EngD  69.89 
 
 
358 aa  487  1e-136  Frankia sp. EAN1pec  Bacteria  normal  0.0266679  normal  0.117665 
 
 
-
 
NC_014158  Tpau_3101  GTP-binding protein YchF  70.8 
 
 
357 aa  486  1e-136  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4365  GTP-dependent nucleic acid-binding protein EngD  71.55 
 
 
359 aa  486  1e-136  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0736  GTP-dependent nucleic acid-binding protein EngD  70.72 
 
 
359 aa  487  1e-136  Actinosynnema mirum DSM 43827  Bacteria  normal  0.217905  n/a   
 
 
-
 
NC_013441  Gbro_3392  GTP-binding protein YchF  69.06 
 
 
359 aa  483  1e-135  Gordonia bronchialis DSM 43247  Bacteria  normal  0.180575  n/a   
 
 
-
 
NC_008726  Mvan_4625  GTP-dependent nucleic acid-binding protein EngD  70.44 
 
 
360 aa  483  1e-135  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.54824  normal 
 
 
-
 
NC_007777  Francci3_3871  GTP-dependent nucleic acid-binding protein EngD  69.89 
 
 
358 aa  483  1e-135  Frankia sp. CcI3  Bacteria  normal  0.479028  normal 
 
 
-
 
NC_008541  Arth_2831  GTP-dependent nucleic acid-binding protein EngD  66.85 
 
 
368 aa  482  1e-135  Arthrobacter sp. FB24  Bacteria  normal  0.593989  n/a   
 
 
-
 
NC_009338  Mflv_2082  GTP-dependent nucleic acid-binding protein EngD  69.34 
 
 
360 aa  479  1e-134  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.330246  normal  0.125841 
 
 
-
 
NC_009664  Krad_1124  GTP-dependent nucleic acid-binding protein EngD  70.17 
 
 
361 aa  475  1e-133  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.356013 
 
 
-
 
NC_011886  Achl_2546  GTP-dependent nucleic acid-binding protein EngD  67.13 
 
 
363 aa  476  1e-133  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000002151 
 
 
-
 
NC_013169  Ksed_20210  GTP-dependent nucleic acid-binding protein EngD  67.96 
 
 
361 aa  476  1e-133  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.640353  normal  0.191287 
 
 
-
 
NC_008146  Mmcs_4102  GTP-dependent nucleic acid-binding protein EngD  69.36 
 
 
376 aa  475  1e-133  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4178  GTP-dependent nucleic acid-binding protein EngD  69.36 
 
 
376 aa  475  1e-133  Mycobacterium sp. KMS  Bacteria  normal  0.40111  normal 
 
 
-
 
NC_012669  Bcav_1105  GTP-dependent nucleic acid-binding protein EngD  66.57 
 
 
361 aa  471  1e-132  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.692178 
 
 
-
 
NC_009077  Mjls_4333  GTP-dependent nucleic acid-binding protein EngD  69.08 
 
 
376 aa  474  1e-132  Mycobacterium sp. JLS  Bacteria  normal  normal  0.567593 
 
 
-
 
NC_012803  Mlut_16190  GTP-dependent nucleic acid-binding protein EngD  68.73 
 
 
354 aa  460  9.999999999999999e-129  Micrococcus luteus NCTC 2665  Bacteria  normal  0.938895  n/a   
 
 
-
 
NC_013721  HMPREF0424_0648  GTP-binding protein YchF  61.71 
 
 
362 aa  457  1e-127  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.379901 
 
 
-
 
NC_009565  TBFG_11134  GTP-dependent nucleic acid-binding protein EngD  69.34 
 
 
357 aa  456  1e-127  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0667  GTP-dependent nucleic acid-binding protein EngD  60.61 
 
 
364 aa  427  1e-118  Bifidobacterium longum DJO10A  Bacteria  normal  0.416643  n/a   
 
 
-
 
NC_013203  Apar_0186  GTP-binding protein YchF  56.68 
 
 
354 aa  404  1e-111  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.448936 
 
 
-
 
NC_013170  Ccur_11960  GTP-binding protein YchF  57.53 
 
 
354 aa  392  1e-108  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.642415  normal 
 
 
-
 
NC_013204  Elen_1055  GTP-binding protein YchF  56.99 
 
 
354 aa  389  1e-107  Eggerthella lenta DSM 2243  Bacteria  normal  0.0763151  hitchhiker  0.00159487 
 
 
-
 
NC_008751  Dvul_1647  GTP-dependent nucleic acid-binding protein EngD  54.22 
 
 
366 aa  382  1e-105  Desulfovibrio vulgaris DP4  Bacteria  normal  0.429909  normal  0.918011 
 
 
-
 
NC_013165  Shel_21870  GTP-binding protein YchF  54.99 
 
 
354 aa  379  1e-104  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.0475417 
 
 
-
 
NC_008254  Meso_2159  GTP-dependent nucleic acid-binding protein EngD  54.32 
 
 
367 aa  377  1e-103  Chelativorans sp. BNC1  Bacteria  normal  0.470887  n/a   
 
 
-
 
NC_011729  PCC7424_0231  GTP-dependent nucleic acid-binding protein EngD  53.17 
 
 
363 aa  372  1e-102  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.375519 
 
 
-
 
NC_011883  Ddes_0946  GTP-dependent nucleic acid-binding protein EngD  53.41 
 
 
367 aa  372  1e-102  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1574  GTP-dependent nucleic acid-binding protein EngD  54.59 
 
 
365 aa  372  1e-102  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.796627 
 
 
-
 
NC_010571  Oter_3096  GTP-binding protein YchF  55.14 
 
 
367 aa  372  1e-102  Opitutus terrae PB90-1  Bacteria  normal  normal  0.156001 
 
 
-
 
NC_013173  Dbac_0442  GTP-binding protein YchF  53.49 
 
 
366 aa  369  1e-101  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.637193  n/a   
 
 
-
 
NC_011369  Rleg2_2771  GTP-dependent nucleic acid-binding protein EngD  52.57 
 
 
367 aa  369  1e-101  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2510  GTP-dependent nucleic acid-binding protein EngD  54.1 
 
 
365 aa  370  1e-101  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.566797  normal  0.501348 
 
 
-
 
NC_007498  Pcar_2000  GTP-dependent nucleic acid-binding protein EngD  52.3 
 
 
364 aa  369  1e-101  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0365484  n/a   
 
 
-
 
NC_011769  DvMF_0234  GTP-dependent nucleic acid-binding protein EngD  52.86 
 
 
366 aa  370  1e-101  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0453052 
 
 
-
 
NC_008740  Maqu_2368  GTP-dependent nucleic acid-binding protein EngD  53.26 
 
 
363 aa  370  1e-101  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2266  GTP-dependent nucleic acid-binding protein EngD  53.39 
 
 
367 aa  367  1e-100  Sinorhizobium medicae WSM419  Bacteria  normal  0.83049  normal  0.983976 
 
 
-
 
NC_013223  Dret_1390  GTP-binding protein YchF  53.12 
 
 
367 aa  365  1e-100  Desulfohalobium retbaense DSM 5692  Bacteria  decreased coverage  0.00313988  normal  0.853679 
 
 
-
 
NC_007604  Synpcc7942_0554  GTP-dependent nucleic acid-binding protein EngD  52.7 
 
 
363 aa  367  1e-100  Synechococcus elongatus PCC 7942  Bacteria  normal  0.268556  normal 
 
 
-
 
NC_010655  Amuc_0445  GTP-binding protein YchF  52.41 
 
 
373 aa  365  1e-100  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.0330999  normal 
 
 
-
 
NC_007958  RPD_3999  GTP-dependent nucleic acid-binding protein EngD  54.22 
 
 
365 aa  365  1e-100  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3035  GTP-dependent nucleic acid-binding protein EngD  52.3 
 
 
367 aa  367  1e-100  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0530  GTP-dependent nucleic acid-binding protein EngD  52.99 
 
 
363 aa  365  1e-100  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3547  GTP-dependent nucleic acid-binding protein EngD  51.6 
 
 
366 aa  366  1e-100  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_2931  GTP-binding protein YchF  52.83 
 
 
366 aa  364  1e-99  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0390  GTP-dependent nucleic acid-binding protein EngD  53.53 
 
 
363 aa  364  1e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.997224  normal  0.0213751 
 
 
-
 
NC_007964  Nham_3101  GTP-dependent nucleic acid-binding protein EngD  53.15 
 
 
365 aa  364  1e-99  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_3090  GTP-dependent nucleic acid-binding protein EngD  51.64 
 
 
363 aa  365  1e-99  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3030  GTP-dependent nucleic acid-binding protein EngD  51.64 
 
 
363 aa  365  1e-99  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009714  CHAB381_1047  GTP-dependent nucleic acid-binding protein EngD  50.68 
 
 
367 aa  364  1e-99  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4838  GTP-dependent nucleic acid-binding protein EngD  53.53 
 
 
365 aa  363  2e-99  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0422  GTP-dependent nucleic acid-binding protein EngD  51.88 
 
 
365 aa  363  2e-99  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0242427  n/a   
 
 
-
 
NC_009487  SaurJH9_0411  GTP-dependent nucleic acid-binding protein EngD  51.88 
 
 
365 aa  363  2e-99  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00200515  n/a   
 
 
-
 
NC_006369  lpl2579  GTP-dependent nucleic acid-binding protein EngD  53.26 
 
 
363 aa  364  2e-99  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_008787  CJJ81176_0937  GTP-dependent nucleic acid-binding protein EngD  50.95 
 
 
367 aa  363  2e-99  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.844815  n/a   
 
 
-
 
NC_003912  CJE1008  GTP-dependent nucleic acid-binding protein EngD  50.68 
 
 
367 aa  363  4e-99  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0708  GTP-dependent nucleic acid-binding protein EngD  52.29 
 
 
366 aa  362  4e-99  Caulobacter sp. K31  Bacteria  normal  0.965008  normal 
 
 
-
 
NC_009707  JJD26997_0884  GTP-dependent nucleic acid-binding protein EngD  50.41 
 
 
367 aa  362  6e-99  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp2707  GTP-dependent nucleic acid-binding protein EngD  52.99 
 
 
363 aa  362  6e-99  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007519  Dde_1698  GTP-dependent nucleic acid-binding protein EngD  51.64 
 
 
366 aa  362  7.0000000000000005e-99  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.309195  n/a   
 
 
-
 
NC_009484  Acry_1676  GTP-dependent nucleic acid-binding protein EngD  53.91 
 
 
364 aa  361  1e-98  Acidiphilium cryptum JF-5  Bacteria  normal  0.0252475  n/a   
 
 
-
 
NC_009674  Bcer98_4015  GTP-dependent nucleic acid-binding protein EngD  50.81 
 
 
366 aa  361  1e-98  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.362655  n/a   
 
 
-
 
NC_007778  RPB_4159  GTP-dependent nucleic acid-binding protein EngD  53.41 
 
 
365 aa  361  1e-98  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.471291  normal  0.369246 
 
 
-
 
NC_010001  Cphy_2482  GTP-binding protein YchF  53.23 
 
 
365 aa  360  2e-98  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3194  GTP-dependent nucleic acid-binding protein EngD  51.63 
 
 
367 aa  360  2e-98  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011680  PHATRDRAFT_37067  predicted protein  53.35 
 
 
363 aa  360  3e-98  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_008599  CFF8240_1166  GTP-dependent nucleic acid-binding protein EngD  49.19 
 
 
367 aa  359  3e-98  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.219155  n/a   
 
 
-
 
NC_007925  RPC_1417  GTP-dependent nucleic acid-binding protein EngD  53.53 
 
 
365 aa  359  4e-98  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.685552 
 
 
-
 
NC_007298  Daro_3733  GTP-dependent nucleic acid-binding protein EngD  53.97 
 
 
363 aa  359  5e-98  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.316822 
 
 
-
 
NC_007643  Rru_A3748  GTP-dependent nucleic acid-binding protein EngD  52.59 
 
 
367 aa  359  5e-98  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4263  GTP-dependent nucleic acid-binding protein EngD  52.34 
 
 
363 aa  358  6e-98  Cyanothece sp. PCC 7425  Bacteria  normal  0.109438  normal  0.19312 
 
 
-
 
NC_012793  GWCH70_3418  GTP-dependent nucleic acid-binding protein EngD  50.81 
 
 
366 aa  358  7e-98  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000016062  n/a   
 
 
-
 
NC_008686  Pden_0334  GTP-dependent nucleic acid-binding protein EngD  52.28 
 
 
365 aa  358  7e-98  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.246253 
 
 
-
 
NC_014248  Aazo_3794  GTP-binding protein YchF  51.52 
 
 
363 aa  358  9.999999999999999e-98  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5333  GTP-dependent nucleic acid-binding protein EngD  50.54 
 
 
366 aa  358  9.999999999999999e-98  Bacillus cereus G9842  Bacteria  hitchhiker  0.000128538  hitchhiker  0.000000465437 
 
 
-
 
NC_011725  BCB4264_A5602  GTP-dependent nucleic acid-binding protein EngD  50.81 
 
 
366 aa  357  9.999999999999999e-98  Bacillus cereus B4264  Bacteria  normal  0.0104876  n/a   
 
 
-
 
NC_007520  Tcr_0395  GTP-dependent nucleic acid-binding protein EngD  50.4 
 
 
363 aa  358  9.999999999999999e-98  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00186596  n/a   
 
 
-
 
NC_009667  Oant_1629  GTP-dependent nucleic acid-binding protein EngD  52.59 
 
 
367 aa  357  9.999999999999999e-98  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.866476  n/a   
 
 
-
 
NC_008347  Mmar10_0755  GTP-dependent nucleic acid-binding protein EngD  54.22 
 
 
365 aa  358  9.999999999999999e-98  Maricaulis maris MCS10  Bacteria  normal  normal  0.50499 
 
 
-
 
NC_002976  SERP0041  GTP-dependent nucleic acid-binding protein EngD  50.81 
 
 
365 aa  357  1.9999999999999998e-97  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA2032  GTP-dependent nucleic acid-binding protein EngD  52.43 
 
 
363 aa  357  1.9999999999999998e-97  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1615  GTP-dependent nucleic acid-binding protein EngD  49.46 
 
 
370 aa  357  1.9999999999999998e-97  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
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