More than 300 homologs were found in PanDaTox collection
for query gene Krad_1124 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_1124  GTP-dependent nucleic acid-binding protein EngD  100 
 
 
361 aa  717    Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.356013 
 
 
-
 
NC_013521  Sked_26380  GTP-binding protein YchF  74.79 
 
 
361 aa  539  9.999999999999999e-153  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0845459 
 
 
-
 
NC_013159  Svir_31400  GTP-dependent nucleic acid-binding protein EngD  74.86 
 
 
360 aa  535  1e-151  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.292075 
 
 
-
 
NC_008541  Arth_2831  GTP-dependent nucleic acid-binding protein EngD  74.79 
 
 
368 aa  536  1e-151  Arthrobacter sp. FB24  Bacteria  normal  0.593989  n/a   
 
 
-
 
NC_013172  Bfae_22930  GTP-dependent nucleic acid-binding protein EngD  73.26 
 
 
361 aa  534  1e-150  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0946  GTP-binding protein YchF  72.85 
 
 
361 aa  534  1e-150  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0473  GTP-dependent nucleic acid-binding protein EngD  72.8 
 
 
364 aa  534  1e-150  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0736  GTP-dependent nucleic acid-binding protein EngD  76.18 
 
 
359 aa  532  1e-150  Actinosynnema mirum DSM 43827  Bacteria  normal  0.217905  n/a   
 
 
-
 
NC_014210  Ndas_0133  GTP-binding protein YchF  73.35 
 
 
361 aa  530  1e-149  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8269  GTP-dependent nucleic acid-binding protein EngD  72.3 
 
 
357 aa  528  1e-149  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2546  GTP-dependent nucleic acid-binding protein EngD  73.96 
 
 
363 aa  527  1e-148  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000002151 
 
 
-
 
NC_013174  Jden_0748  GTP-dependent nucleic acid-binding protein EngD  72.02 
 
 
369 aa  525  1e-148  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0977  GTP-binding protein YchF  75.62 
 
 
358 aa  527  1e-148  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.245774  hitchhiker  0.00114943 
 
 
-
 
NC_012669  Bcav_1105  GTP-dependent nucleic acid-binding protein EngD  74.52 
 
 
361 aa  527  1e-148  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.692178 
 
 
-
 
NC_009380  Strop_3781  GTP-dependent nucleic acid-binding protein EngD  74.79 
 
 
361 aa  521  1e-147  Salinispora tropica CNB-440  Bacteria  normal  normal  0.699286 
 
 
-
 
NC_009338  Mflv_2082  GTP-dependent nucleic acid-binding protein EngD  75.62 
 
 
360 aa  523  1e-147  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.330246  normal  0.125841 
 
 
-
 
NC_012803  Mlut_16190  GTP-dependent nucleic acid-binding protein EngD  77.68 
 
 
354 aa  518  1e-146  Micrococcus luteus NCTC 2665  Bacteria  normal  0.938895  n/a   
 
 
-
 
NC_009953  Sare_4160  GTP-dependent nucleic acid-binding protein EngD  75.35 
 
 
361 aa  516  1.0000000000000001e-145  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000134834 
 
 
-
 
NC_013757  Gobs_1033  GTP-binding protein YchF  76.45 
 
 
357 aa  515  1.0000000000000001e-145  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4333  GTP-dependent nucleic acid-binding protein EngD  74.86 
 
 
376 aa  511  1e-144  Mycobacterium sp. JLS  Bacteria  normal  normal  0.567593 
 
 
-
 
NC_008146  Mmcs_4102  GTP-dependent nucleic acid-binding protein EngD  74.86 
 
 
376 aa  511  1e-144  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4178  GTP-dependent nucleic acid-binding protein EngD  74.86 
 
 
376 aa  511  1e-144  Mycobacterium sp. KMS  Bacteria  normal  0.40111  normal 
 
 
-
 
NC_013510  Tcur_1095  GTP-binding protein YchF  71.35 
 
 
363 aa  509  1e-143  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0537245  n/a   
 
 
-
 
NC_014158  Tpau_3101  GTP-binding protein YchF  72.85 
 
 
357 aa  508  1e-143  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4625  GTP-dependent nucleic acid-binding protein EngD  74.52 
 
 
360 aa  508  1e-143  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.54824  normal 
 
 
-
 
NC_013595  Sros_8476  GTP-binding protein YchF  70.17 
 
 
362 aa  504  9.999999999999999e-143  Streptosporangium roseum DSM 43021  Bacteria  normal  0.775953  normal 
 
 
-
 
NC_013441  Gbro_3392  GTP-binding protein YchF  72.85 
 
 
359 aa  506  9.999999999999999e-143  Gordonia bronchialis DSM 43247  Bacteria  normal  0.180575  n/a   
 
 
-
 
NC_013235  Namu_4365  GTP-dependent nucleic acid-binding protein EngD  75.35 
 
 
359 aa  503  1e-141  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0857  GTP-dependent nucleic acid-binding protein EngD  71.47 
 
 
358 aa  499  1e-140  Frankia sp. EAN1pec  Bacteria  normal  0.0266679  normal  0.117665 
 
 
-
 
NC_007777  Francci3_3871  GTP-dependent nucleic acid-binding protein EngD  71.19 
 
 
358 aa  500  1e-140  Frankia sp. CcI3  Bacteria  normal  0.479028  normal 
 
 
-
 
NC_013169  Ksed_20210  GTP-dependent nucleic acid-binding protein EngD  73.96 
 
 
361 aa  499  1e-140  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.640353  normal  0.191287 
 
 
-
 
NC_008578  Acel_1861  GTP-dependent nucleic acid-binding protein EngD  70.03 
 
 
373 aa  501  1e-140  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.924801 
 
 
-
 
NC_008699  Noca_1080  GTP-dependent nucleic acid-binding protein EngD  69.61 
 
 
359 aa  491  1e-137  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11134  GTP-dependent nucleic acid-binding protein EngD  73.68 
 
 
357 aa  486  1e-136  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3062  GTP-binding protein YchF  69.34 
 
 
362 aa  482  1e-135  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5521  GTP-binding protein YchF  68.61 
 
 
358 aa  479  1e-134  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.633913  normal  0.842427 
 
 
-
 
NC_013721  HMPREF0424_0648  GTP-binding protein YchF  64.92 
 
 
362 aa  480  1e-134  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.379901 
 
 
-
 
NC_010816  BLD_0667  GTP-dependent nucleic acid-binding protein EngD  64.36 
 
 
364 aa  463  1e-129  Bifidobacterium longum DJO10A  Bacteria  normal  0.416643  n/a   
 
 
-
 
NC_013204  Elen_1055  GTP-binding protein YchF  58.24 
 
 
354 aa  395  1e-109  Eggerthella lenta DSM 2243  Bacteria  normal  0.0763151  hitchhiker  0.00159487 
 
 
-
 
NC_013170  Ccur_11960  GTP-binding protein YchF  57.97 
 
 
354 aa  397  1e-109  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.642415  normal 
 
 
-
 
NC_013203  Apar_0186  GTP-binding protein YchF  56.23 
 
 
354 aa  394  1e-108  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.448936 
 
 
-
 
NC_013411  GYMC61_3547  GTP-dependent nucleic acid-binding protein EngD  53.78 
 
 
366 aa  389  1e-107  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013165  Shel_21870  GTP-binding protein YchF  55.12 
 
 
354 aa  386  1e-106  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.0475417 
 
 
-
 
NC_013173  Dbac_0442  GTP-binding protein YchF  54.1 
 
 
366 aa  382  1e-105  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.637193  n/a   
 
 
-
 
NC_008025  Dgeo_1574  GTP-dependent nucleic acid-binding protein EngD  55.53 
 
 
365 aa  381  1e-105  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.796627 
 
 
-
 
NC_008740  Maqu_2368  GTP-dependent nucleic acid-binding protein EngD  54.12 
 
 
363 aa  384  1e-105  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP0041  GTP-dependent nucleic acid-binding protein EngD  52.73 
 
 
365 aa  380  1e-104  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0390  GTP-dependent nucleic acid-binding protein EngD  56.32 
 
 
363 aa  381  1e-104  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.997224  normal  0.0213751 
 
 
-
 
NC_003909  BCE_5626  GTP-dependent nucleic acid-binding protein EngD  52.02 
 
 
366 aa  375  1e-103  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000871672  n/a   
 
 
-
 
NC_007604  Synpcc7942_0554  GTP-dependent nucleic acid-binding protein EngD  55.1 
 
 
363 aa  375  1e-103  Synechococcus elongatus PCC 7942  Bacteria  normal  0.268556  normal 
 
 
-
 
NC_011901  Tgr7_0530  GTP-dependent nucleic acid-binding protein EngD  54.12 
 
 
363 aa  377  1e-103  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0411  GTP-dependent nucleic acid-binding protein EngD  52.46 
 
 
365 aa  376  1e-103  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00200515  n/a   
 
 
-
 
NC_009632  SaurJH1_0422  GTP-dependent nucleic acid-binding protein EngD  52.46 
 
 
365 aa  376  1e-103  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0242427  n/a   
 
 
-
 
NC_009253  Dred_1280  GTP-binding protein YchF  53.26 
 
 
367 aa  378  1e-103  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0708  GTP-dependent nucleic acid-binding protein EngD  54.59 
 
 
366 aa  375  1e-103  Caulobacter sp. K31  Bacteria  normal  0.965008  normal 
 
 
-
 
NC_008752  Aave_0887  GTP-binding protein YchF  54.25 
 
 
364 aa  372  1e-102  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0231852  normal  0.589868 
 
 
-
 
NC_011725  BCB4264_A5602  GTP-dependent nucleic acid-binding protein EngD  51.48 
 
 
366 aa  373  1e-102  Bacillus cereus B4264  Bacteria  normal  0.0104876  n/a   
 
 
-
 
NC_011726  PCC8801_3090  GTP-dependent nucleic acid-binding protein EngD  54.27 
 
 
363 aa  373  1e-102  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_005945  BAS5328  GTP-dependent nucleic acid-binding protein EngD  51.75 
 
 
366 aa  374  1e-102  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00440809  n/a   
 
 
-
 
NC_005957  BT9727_5156  GTP-dependent nucleic acid-binding protein EngD  51.75 
 
 
366 aa  374  1e-102  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.474948  n/a   
 
 
-
 
NC_006274  BCZK5172  GTP-dependent nucleic acid-binding protein EngD  51.75 
 
 
366 aa  374  1e-102  Bacillus cereus E33L  Bacteria  decreased coverage  0.000341574  n/a   
 
 
-
 
NC_006368  lpp2707  GTP-dependent nucleic acid-binding protein EngD  53.68 
 
 
363 aa  371  1e-102  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011772  BCG9842_B5333  GTP-dependent nucleic acid-binding protein EngD  51.48 
 
 
366 aa  372  1e-102  Bacillus cereus G9842  Bacteria  hitchhiker  0.000128538  hitchhiker  0.000000465437 
 
 
-
 
NC_011883  Ddes_0946  GTP-dependent nucleic acid-binding protein EngD  52.59 
 
 
367 aa  374  1e-102  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_4015  GTP-dependent nucleic acid-binding protein EngD  51.75 
 
 
366 aa  374  1e-102  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.362655  n/a   
 
 
-
 
NC_013161  Cyan8802_3030  GTP-dependent nucleic acid-binding protein EngD  54.27 
 
 
363 aa  373  1e-102  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_5724  GTP-dependent nucleic acid-binding protein EngD  51.75 
 
 
366 aa  374  1e-102  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.000153579  n/a   
 
 
-
 
NC_010320  Teth514_2022  GTP-dependent nucleic acid-binding protein EngD  51.65 
 
 
363 aa  374  1e-102  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1521  GTP-dependent nucleic acid-binding protein EngD  53.78 
 
 
363 aa  374  1e-102  Chromohalobacter salexigens DSM 3043  Bacteria  hitchhiker  0.00078802  n/a   
 
 
-
 
NC_011773  BCAH820_5585  GTP-dependent nucleic acid-binding protein EngD  51.75 
 
 
366 aa  374  1e-102  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000269 
 
 
-
 
NC_011658  BCAH187_A5663  GTP-dependent nucleic acid-binding protein EngD  51.75 
 
 
366 aa  374  1e-102  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000189692  n/a   
 
 
-
 
NC_006369  lpl2579  GTP-dependent nucleic acid-binding protein EngD  53.41 
 
 
363 aa  369  1e-101  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_3418  GTP-dependent nucleic acid-binding protein EngD  51.48 
 
 
366 aa  370  1e-101  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000016062  n/a   
 
 
-
 
NC_013889  TK90_0348  GTP-binding protein YchF  54.52 
 
 
364 aa  369  1e-101  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.214484 
 
 
-
 
NC_009012  Cthe_0877  GTP-dependent nucleic acid-binding protein EngD  52.33 
 
 
364 aa  370  1e-101  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00007173  n/a   
 
 
-
 
NC_008254  Meso_2159  GTP-dependent nucleic acid-binding protein EngD  52.67 
 
 
367 aa  370  1e-101  Chelativorans sp. BNC1  Bacteria  normal  0.470887  n/a   
 
 
-
 
NC_014148  Plim_1659  GTP-binding protein YchF  53.89 
 
 
363 aa  368  1e-101  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1204  GTP-binding protein YchF  56.76 
 
 
372 aa  369  1e-101  Meiothermus ruber DSM 1279  Bacteria  normal  0.590839  normal  0.981589 
 
 
-
 
NC_008751  Dvul_1647  GTP-dependent nucleic acid-binding protein EngD  53.68 
 
 
366 aa  369  1e-101  Desulfovibrio vulgaris DP4  Bacteria  normal  0.429909  normal  0.918011 
 
 
-
 
NC_014248  Aazo_3794  GTP-binding protein YchF  52.07 
 
 
363 aa  365  1e-100  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA2032  GTP-dependent nucleic acid-binding protein EngD  53.3 
 
 
363 aa  367  1e-100  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1634  GTP-dependent nucleic acid-binding protein EngD  53.04 
 
 
362 aa  365  1e-100  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.0594912  n/a   
 
 
-
 
NC_009952  Dshi_0954  GTP-dependent nucleic acid-binding protein EngD  53.42 
 
 
365 aa  367  1e-100  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2510  GTP-dependent nucleic acid-binding protein EngD  53.97 
 
 
365 aa  367  1e-100  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.566797  normal  0.501348 
 
 
-
 
NC_010001  Cphy_2482  GTP-binding protein YchF  50.82 
 
 
365 aa  368  1e-100  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_1047  GTP-dependent nucleic acid-binding protein EngD  51.35 
 
 
367 aa  367  1e-100  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4159  GTP-dependent nucleic acid-binding protein EngD  53.53 
 
 
365 aa  365  1e-100  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.471291  normal  0.369246 
 
 
-
 
NC_007947  Mfla_0675  GTP-dependent nucleic acid-binding protein EngD  52.21 
 
 
361 aa  367  1e-100  Methylobacillus flagellatus KT  Bacteria  normal  0.762559  normal 
 
 
-
 
NC_007958  RPD_3999  GTP-dependent nucleic acid-binding protein EngD  53.26 
 
 
365 aa  365  1e-100  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_3101  GTP-dependent nucleic acid-binding protein EngD  53.97 
 
 
365 aa  367  1e-100  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3035  GTP-dependent nucleic acid-binding protein EngD  52.83 
 
 
367 aa  366  1e-100  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_1390  GTP-binding protein YchF  53.41 
 
 
367 aa  366  1e-100  Desulfohalobium retbaense DSM 5692  Bacteria  decreased coverage  0.00313988  normal  0.853679 
 
 
-
 
NC_011884  Cyan7425_4263  GTP-dependent nucleic acid-binding protein EngD  53.99 
 
 
363 aa  365  1e-100  Cyanothece sp. PCC 7425  Bacteria  normal  0.109438  normal  0.19312 
 
 
-
 
NC_009636  Smed_2266  GTP-dependent nucleic acid-binding protein EngD  52.57 
 
 
367 aa  368  1e-100  Sinorhizobium medicae WSM419  Bacteria  normal  0.83049  normal  0.983976 
 
 
-
 
NC_008825  Mpe_A3166  putative GTP-binding protein  54.25 
 
 
364 aa  367  1e-100  Methylibium petroleiphilum PM1  Bacteria  normal  hitchhiker  0.00563466 
 
 
-
 
NC_009052  Sbal_3257  GTP-dependent nucleic acid-binding protein EngD  51.65 
 
 
363 aa  364  1e-99  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000000720126  n/a   
 
 
-
 
NC_008309  HS_0503  GTP-dependent nucleic acid-binding protein EngD  51.37 
 
 
363 aa  364  1e-99  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4838  GTP-dependent nucleic acid-binding protein EngD  52.88 
 
 
365 aa  364  1e-99  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2423  GTP-dependent nucleic acid-binding protein EngD  51.1 
 
 
363 aa  363  2e-99  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.0847638 
 
 
-
 
NC_007925  RPC_1417  GTP-dependent nucleic acid-binding protein EngD  53.26 
 
 
365 aa  363  2e-99  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.685552 
 
 
-
 
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