| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4160 |
|---|
| Symbol | |
|---|
| ID | 5707709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4725072 |
|---|
| End bp | 4726157 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641273587 |
|---|
| Product | GTP-dependent nucleic acid-binding protein EngD |
|---|
| Protein accession | YP_001538940 |
|---|
| Protein GI | 159039687 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0012] Predicted GTPase, probable translation factor |
|---|
| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000134834 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCTCA CCATCGGCAT CGTCGGCCTG CCCAACGTCG GCAAGAGCAC CCTGTTCAAC
GCGCTGACCA AGAACGACGT GCTCGCGGCG AACTACCCCT TCGCCACCAT CGAGCCCAAC
GTCGGCGTGG TCGGCCTGCC GGACGAGCGG CTGGGTAAGC TCGCCGAGAT CTTCGACTCG
CAGAAGGTGA TCCCCGCGCC GGTGTCGTTC GTCGACATCG CCGGGCTGGT CCGGGGCGCC
TCGAAGGGCC AGGGGCGGGG CAACGCGTTC CTCGCCAACA TCCGGGACGC CGCCGCGATC
TGTCAGGTCG TTCGTGCCTT CTCCGACCCG AACGTGGTGC ACGTCGACGG CAAGGTCGCT
CCCGCGGACG ACATCGAGAC CATCAACACG GAGCTGATCC TCGCCGACCT GCAGACGCTG
GAGCGGGCGA TTCCCCGGCT GGAGAAGGAG GCCAAGCTCC GCAAGGACCG GGCCGCCGCC
CTGGCCGCCG CCAAGGCCGC CGTGGAGGTC CTCGACAACG GCACCACCCT GTACGCGGGC
GCCGCTGCCG CCGGTGTCGA GCTGGAGCAT CTGCGCGAGC TGCATCTGCT GACCACCAAG
CCCTTCCTGT ACGTGTTCAA CGTTGACGAG GCCGAACTGG CCAACGCCGA GTTCCTCGAC
GAGCTGCGGG CCCTGGTCGC CCCCGCCGAG GCTGTCTTCA TGGACGCAAA GATCGAATCG
GAGCTGGTAG ATCTGCCCGA AGAGGAGGCC CGCGAGCTAC TGGAGTCGAT CGGGCAGTCC
GAGCCGGGAC TGGACCAGCT CGTCCGGGTC GGCTTCCGCA CGCTGGGGCT CCAGACGTAC
CTCACCGCCG GACCCAAGGA GGCGCGGGCC TGGACCGTGC ACGTCGGGGC GACCGCCCCG
GAAGCCGCCG GGGTTATCCA CTCCGACTTC CAGCGCGGCT TCATCAAAGC TGAGGTCGTC
TCCTACAACG ACCTGCTCGA GGCGGGATCG ATGAGCGCCG CGAAGGCGGT GGGCAAGGTC
CGCATCGAGG GCAAGGACTA CGTCATGCAG GACGGCGACG TGGTGGAGTT CCGCTTCAAC
GTCTGA
|
|---|
| Protein sequence | MSLTIGIVGL PNVGKSTLFN ALTKNDVLAA NYPFATIEPN VGVVGLPDER LGKLAEIFDS
QKVIPAPVSF VDIAGLVRGA SKGQGRGNAF LANIRDAAAI CQVVRAFSDP NVVHVDGKVA
PADDIETINT ELILADLQTL ERAIPRLEKE AKLRKDRAAA LAAAKAAVEV LDNGTTLYAG
AAAAGVELEH LRELHLLTTK PFLYVFNVDE AELANAEFLD ELRALVAPAE AVFMDAKIES
ELVDLPEEEA RELLESIGQS EPGLDQLVRV GFRTLGLQTY LTAGPKEARA WTVHVGATAP
EAAGVIHSDF QRGFIKAEVV SYNDLLEAGS MSAAKAVGKV RIEGKDYVMQ DGDVVEFRFN
V
|
|---|
| |