Gene Bcav_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1105 
Symbol 
ID7859959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1244893 
End bp1245978 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content70% 
IMG OID643865189 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_002881127 
Protein GI229819601 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.692178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCTCA CCATCGGCAT CGTCGGACTG CCCAACGTCG GCAAGTCCAC CCTCTTCAAT 
GCGCTGACCC GCGCCCAGGT CCTCGCCGCG AACTACCCGT TCGCGACGAT CGAGCCCAAC
GTCGGCGTCG TCCCGCTGCC CGACCCGCGC CTGGACACGC TGGCCGGCAT CTTCGGGAGC
GAGCGCATCG TTCCCGCGAC GGTGTCGTTC GTCGACATCG CGGGCATCGT CAAGGGCGCG
AGCGAGGGGG AGGGGCTCGG CAACCAGTTC CTCGCGAACA TCCGCGAGGC TGACGCGATC
TGCATGGTGA CCCGGGCGTT CGCGGACCCC GACGTCGTGC ACGTCGACGG CCGCGTCGAC
GCTCTCGCCG ACGTCGAGAT CCTCACCACC GAGCTCATCC TCGCCGACCT CCAGACGCTC
GAGAAGGCGA TCCCGCGCCT CGAGAAGGAG GTCAAGGGTA AGAAGAGCGA CGCCGCTGTC
CTCGCCACGG CCGTCCGTGC CAAGCAGCTG CTGGAGACCG GGACGACGCT CGACGCCGCG
GGCGGCGACG ACGGGCTGGA CCCGGCGATC CTGGACACGT TCCAGCTCAT GACGGCGAAG
CCCTTCATCT ACGTCGTCAA CACGGACGAC GCCGGGCTCG GGAACGAGGC GTTCCAGGCT
GAGCTGCGCG CCGCGTGGGC GCCGGCCGAC GTGATCTTCC TCGACGCCAA GTTCGAGTCC
GAGCTCGTGG AGCTCGACCC CGAGGACGCG GCGGAGATGC TCGCCGAGTC CGGTCAGCCG
GAGTCCGGGC TCGACCAGCT CGCGCGCGTC GGCTTCCACA CGCTCGGCCT CCAGACCTAC
CTCACGGCGG GTCCGAAGGA GTCGCGCGCC TGGACGATCC ACCAGGGCTG GACGGCGCCC
CAGGCGGCGG GCGTCATTCA TACGGACTTC CAGAAGGGCT TCATCAAGGC GGAGGTCGTG
TCGTTCGCCG ACCTCGTCGA CGCCGGCAGC ATGGCCGAGG CGAAGGCGCG CGGCCGGGTG
CGCATGGAGG GCAAGGACTA CGTGATGCGC GACGGCGACG TCGTGGAGTT CCGCTTCAGC
GTCTGA
 
Protein sequence
MALTIGIVGL PNVGKSTLFN ALTRAQVLAA NYPFATIEPN VGVVPLPDPR LDTLAGIFGS 
ERIVPATVSF VDIAGIVKGA SEGEGLGNQF LANIREADAI CMVTRAFADP DVVHVDGRVD
ALADVEILTT ELILADLQTL EKAIPRLEKE VKGKKSDAAV LATAVRAKQL LETGTTLDAA
GGDDGLDPAI LDTFQLMTAK PFIYVVNTDD AGLGNEAFQA ELRAAWAPAD VIFLDAKFES
ELVELDPEDA AEMLAESGQP ESGLDQLARV GFHTLGLQTY LTAGPKESRA WTIHQGWTAP
QAAGVIHTDF QKGFIKAEVV SFADLVDAGS MAEAKARGRV RMEGKDYVMR DGDVVEFRFS
V