More than 300 homologs were found in PanDaTox collection
for query gene Bcav_1105 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_1105  GTP-dependent nucleic acid-binding protein EngD  100 
 
 
361 aa  723    Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.692178 
 
 
-
 
NC_013521  Sked_26380  GTP-binding protein YchF  78.12 
 
 
361 aa  560  1.0000000000000001e-159  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0845459 
 
 
-
 
NC_013530  Xcel_0946  GTP-binding protein YchF  77.56 
 
 
361 aa  563  1.0000000000000001e-159  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0748  GTP-dependent nucleic acid-binding protein EngD  77.29 
 
 
369 aa  557  1e-157  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0977  GTP-binding protein YchF  80.11 
 
 
358 aa  553  1e-156  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.245774  hitchhiker  0.00114943 
 
 
-
 
NC_013172  Bfae_22930  GTP-dependent nucleic acid-binding protein EngD  74.79 
 
 
361 aa  542  1e-153  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2831  GTP-dependent nucleic acid-binding protein EngD  73.96 
 
 
368 aa  523  1e-147  Arthrobacter sp. FB24  Bacteria  normal  0.593989  n/a   
 
 
-
 
NC_011886  Achl_2546  GTP-dependent nucleic acid-binding protein EngD  74.24 
 
 
363 aa  520  1e-146  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000002151 
 
 
-
 
NC_013159  Svir_31400  GTP-dependent nucleic acid-binding protein EngD  70.99 
 
 
360 aa  503  1e-141  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.292075 
 
 
-
 
NC_009664  Krad_1124  GTP-dependent nucleic acid-binding protein EngD  74.52 
 
 
361 aa  498  1e-140  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.356013 
 
 
-
 
NC_013441  Gbro_3392  GTP-binding protein YchF  72.02 
 
 
359 aa  497  1e-139  Gordonia bronchialis DSM 43247  Bacteria  normal  0.180575  n/a   
 
 
-
 
NC_014158  Tpau_3101  GTP-binding protein YchF  72.85 
 
 
357 aa  494  1e-139  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_20210  GTP-dependent nucleic acid-binding protein EngD  71.75 
 
 
361 aa  490  1e-137  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.640353  normal  0.191287 
 
 
-
 
NC_007333  Tfu_0473  GTP-dependent nucleic acid-binding protein EngD  67.31 
 
 
364 aa  488  1e-137  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4365  GTP-dependent nucleic acid-binding protein EngD  73.41 
 
 
359 aa  488  1e-137  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2082  GTP-dependent nucleic acid-binding protein EngD  71.19 
 
 
360 aa  486  1e-136  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.330246  normal  0.125841 
 
 
-
 
NC_013131  Caci_8269  GTP-dependent nucleic acid-binding protein EngD  67.04 
 
 
357 aa  486  1e-136  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1095  GTP-binding protein YchF  67.77 
 
 
363 aa  481  1e-135  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0537245  n/a   
 
 
-
 
NC_013721  HMPREF0424_0648  GTP-binding protein YchF  64.64 
 
 
362 aa  484  1e-135  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.379901 
 
 
-
 
NC_013093  Amir_0736  GTP-dependent nucleic acid-binding protein EngD  70.08 
 
 
359 aa  478  1e-134  Actinosynnema mirum DSM 43827  Bacteria  normal  0.217905  n/a   
 
 
-
 
NC_008146  Mmcs_4102  GTP-dependent nucleic acid-binding protein EngD  70.39 
 
 
376 aa  476  1e-133  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4178  GTP-dependent nucleic acid-binding protein EngD  70.39 
 
 
376 aa  476  1e-133  Mycobacterium sp. KMS  Bacteria  normal  0.40111  normal 
 
 
-
 
NC_014210  Ndas_0133  GTP-binding protein YchF  67.86 
 
 
361 aa  473  1e-132  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4160  GTP-dependent nucleic acid-binding protein EngD  67.87 
 
 
361 aa  471  1e-132  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000134834 
 
 
-
 
NC_009077  Mjls_4333  GTP-dependent nucleic acid-binding protein EngD  70.11 
 
 
376 aa  474  1e-132  Mycobacterium sp. JLS  Bacteria  normal  normal  0.567593 
 
 
-
 
NC_010816  BLD_0667  GTP-dependent nucleic acid-binding protein EngD  65.75 
 
 
364 aa  473  1e-132  Bifidobacterium longum DJO10A  Bacteria  normal  0.416643  n/a   
 
 
-
 
NC_013595  Sros_8476  GTP-binding protein YchF  66.57 
 
 
362 aa  471  1e-132  Streptosporangium roseum DSM 43021  Bacteria  normal  0.775953  normal 
 
 
-
 
NC_008699  Noca_1080  GTP-dependent nucleic acid-binding protein EngD  68.23 
 
 
359 aa  468  1.0000000000000001e-131  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4625  GTP-dependent nucleic acid-binding protein EngD  70.08 
 
 
360 aa  470  1.0000000000000001e-131  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.54824  normal 
 
 
-
 
NC_014165  Tbis_3062  GTP-binding protein YchF  66.85 
 
 
362 aa  468  9.999999999999999e-131  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_16190  GTP-dependent nucleic acid-binding protein EngD  73.45 
 
 
354 aa  467  9.999999999999999e-131  Micrococcus luteus NCTC 2665  Bacteria  normal  0.938895  n/a   
 
 
-
 
NC_009380  Strop_3781  GTP-dependent nucleic acid-binding protein EngD  66.48 
 
 
361 aa  464  9.999999999999999e-131  Salinispora tropica CNB-440  Bacteria  normal  normal  0.699286 
 
 
-
 
NC_013947  Snas_5521  GTP-binding protein YchF  66.11 
 
 
358 aa  461  1e-129  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.633913  normal  0.842427 
 
 
-
 
NC_008578  Acel_1861  GTP-dependent nucleic acid-binding protein EngD  64.31 
 
 
373 aa  457  9.999999999999999e-129  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.924801 
 
 
-
 
NC_013757  Gobs_1033  GTP-binding protein YchF  69.25 
 
 
357 aa  459  9.999999999999999e-129  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11134  GTP-dependent nucleic acid-binding protein EngD  68.7 
 
 
357 aa  452  1.0000000000000001e-126  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3871  GTP-dependent nucleic acid-binding protein EngD  65.37 
 
 
358 aa  453  1.0000000000000001e-126  Frankia sp. CcI3  Bacteria  normal  0.479028  normal 
 
 
-
 
NC_009921  Franean1_0857  GTP-dependent nucleic acid-binding protein EngD  65.37 
 
 
358 aa  445  1.0000000000000001e-124  Frankia sp. EAN1pec  Bacteria  normal  0.0266679  normal  0.117665 
 
 
-
 
NC_013173  Dbac_0442  GTP-binding protein YchF  54.62 
 
 
366 aa  382  1e-105  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.637193  n/a   
 
 
-
 
NC_013170  Ccur_11960  GTP-binding protein YchF  56.79 
 
 
354 aa  379  1e-104  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.642415  normal 
 
 
-
 
NC_011901  Tgr7_0530  GTP-dependent nucleic acid-binding protein EngD  53.3 
 
 
363 aa  375  1e-103  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp2707  GTP-dependent nucleic acid-binding protein EngD  53.13 
 
 
363 aa  374  1e-102  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2579  GTP-dependent nucleic acid-binding protein EngD  52.86 
 
 
363 aa  372  1e-102  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013204  Elen_1055  GTP-binding protein YchF  55.4 
 
 
354 aa  372  1e-102  Eggerthella lenta DSM 2243  Bacteria  normal  0.0763151  hitchhiker  0.00159487 
 
 
-
 
NC_013203  Apar_0186  GTP-binding protein YchF  56.23 
 
 
354 aa  374  1e-102  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.448936 
 
 
-
 
NC_002977  MCA2032  GTP-dependent nucleic acid-binding protein EngD  54.12 
 
 
363 aa  369  1e-101  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0395  GTP-dependent nucleic acid-binding protein EngD  51.88 
 
 
363 aa  368  1e-101  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00186596  n/a   
 
 
-
 
NC_010001  Cphy_2482  GTP-binding protein YchF  51.63 
 
 
365 aa  370  1e-101  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0390  GTP-dependent nucleic acid-binding protein EngD  54.22 
 
 
363 aa  365  1e-100  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.997224  normal  0.0213751 
 
 
-
 
NC_008751  Dvul_1647  GTP-dependent nucleic acid-binding protein EngD  54.03 
 
 
366 aa  367  1e-100  Desulfovibrio vulgaris DP4  Bacteria  normal  0.429909  normal  0.918011 
 
 
-
 
NC_010531  Pnec_0155  GTP-binding protein YchF  52.33 
 
 
364 aa  363  2e-99  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.611358  normal  0.940592 
 
 
-
 
NC_006055  Mfl660  GTP-dependent nucleic acid-binding protein EngD  50.14 
 
 
364 aa  363  3e-99  Mesoplasma florum L1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0887  GTP-binding protein YchF  54.52 
 
 
364 aa  363  3e-99  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0231852  normal  0.589868 
 
 
-
 
NC_007347  Reut_A3037  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
387 aa  362  4e-99  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0708  GTP-dependent nucleic acid-binding protein EngD  52.59 
 
 
366 aa  362  5.0000000000000005e-99  Caulobacter sp. K31  Bacteria  normal  0.965008  normal 
 
 
-
 
NC_007298  Daro_3733  GTP-dependent nucleic acid-binding protein EngD  52.99 
 
 
363 aa  362  6e-99  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.316822 
 
 
-
 
NC_008825  Mpe_A3166  putative GTP-binding protein  53.83 
 
 
364 aa  361  1e-98  Methylibium petroleiphilum PM1  Bacteria  normal  hitchhiker  0.00563466 
 
 
-
 
NC_010524  Lcho_0271  GTP-binding protein YchF  53.39 
 
 
364 aa  360  2e-98  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.198016 
 
 
-
 
NC_002976  SERP0041  GTP-dependent nucleic acid-binding protein EngD  51.09 
 
 
365 aa  360  2e-98  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2000  GTP-dependent nucleic acid-binding protein EngD  51.51 
 
 
364 aa  360  2e-98  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0365484  n/a   
 
 
-
 
NC_013889  TK90_0348  GTP-binding protein YchF  53.41 
 
 
364 aa  360  2e-98  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.214484 
 
 
-
 
NC_011145  AnaeK_4473  GTP-dependent nucleic acid-binding protein EngD  54.18 
 
 
370 aa  360  2e-98  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4337  GTP-dependent nucleic acid-binding protein EngD  54.18 
 
 
370 aa  360  2e-98  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.966103  n/a   
 
 
-
 
NC_013422  Hneap_1171  GTP-binding protein YchF  50.27 
 
 
364 aa  360  2e-98  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4492  GTP-dependent nucleic acid-binding protein EngD  54.18 
 
 
370 aa  360  2e-98  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_21870  GTP-binding protein YchF  52.91 
 
 
354 aa  359  3e-98  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.0475417 
 
 
-
 
NC_007484  Noc_0517  GTP-dependent nucleic acid-binding protein EngD  51.77 
 
 
362 aa  359  4e-98  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3547  GTP-dependent nucleic acid-binding protein EngD  50.68 
 
 
366 aa  359  4e-98  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012791  Vapar_4635  GTP-dependent nucleic acid-binding protein EngD  53.17 
 
 
363 aa  359  4e-98  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0286  GTP-binding protein YchF  53.02 
 
 
363 aa  359  5e-98  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.79515 
 
 
-
 
NC_011992  Dtpsy_2928  GTP-binding protein YchF  53.87 
 
 
364 aa  358  6e-98  Acidovorax ebreus TPSY  Bacteria  normal  0.79075  n/a   
 
 
-
 
NC_007947  Mfla_0675  GTP-dependent nucleic acid-binding protein EngD  51.37 
 
 
361 aa  358  6e-98  Methylobacillus flagellatus KT  Bacteria  normal  0.762559  normal 
 
 
-
 
NC_008782  Ajs_3618  GTP-binding protein YchF  53.87 
 
 
364 aa  358  6e-98  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_1390  GTP-binding protein YchF  51.23 
 
 
367 aa  358  8e-98  Desulfohalobium retbaense DSM 5692  Bacteria  decreased coverage  0.00313988  normal  0.853679 
 
 
-
 
NC_007973  Rmet_3193  GTP-dependent nucleic acid-binding protein EngD  53.53 
 
 
363 aa  357  9.999999999999999e-98  Cupriavidus metallidurans CH34  Bacteria  normal  0.36162  normal 
 
 
-
 
NC_008390  Bamb_0429  GTP-dependent nucleic acid-binding protein EngD  52.99 
 
 
364 aa  357  9.999999999999999e-98  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0453  GTP-dependent nucleic acid-binding protein EngD  52.99 
 
 
364 aa  357  9.999999999999999e-98  Burkholderia ambifaria MC40-6  Bacteria  normal  0.660955  normal  0.0338644 
 
 
-
 
NC_008740  Maqu_2368  GTP-dependent nucleic acid-binding protein EngD  52.2 
 
 
363 aa  357  9.999999999999999e-98  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_0142  GTP-binding protein YchF  51.23 
 
 
364 aa  357  1.9999999999999998e-97  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.400282  n/a   
 
 
-
 
NC_010084  Bmul_2871  GTP-dependent nucleic acid-binding protein EngD  53.55 
 
 
364 aa  357  1.9999999999999998e-97  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.103234  normal  0.491395 
 
 
-
 
NC_007651  BTH_I2920  GTP-dependent nucleic acid-binding protein EngD  52.99 
 
 
364 aa  357  1.9999999999999998e-97  Burkholderia thailandensis E264  Bacteria  normal  0.657058  n/a   
 
 
-
 
NC_010508  Bcenmc03_0496  GTP-dependent nucleic acid-binding protein EngD  52.73 
 
 
364 aa  357  1.9999999999999998e-97  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2581  GTP-dependent nucleic acid-binding protein EngD  52.73 
 
 
364 aa  357  1.9999999999999998e-97  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0524  GTP-dependent nucleic acid-binding protein EngD  52.73 
 
 
364 aa  357  1.9999999999999998e-97  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2022  GTP-dependent nucleic acid-binding protein EngD  50.55 
 
 
363 aa  356  2.9999999999999997e-97  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3418  GTP-dependent nucleic acid-binding protein EngD  49.86 
 
 
366 aa  357  2.9999999999999997e-97  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000016062  n/a   
 
 
-
 
NC_009487  SaurJH9_0411  GTP-dependent nucleic acid-binding protein EngD  50.82 
 
 
365 aa  356  3.9999999999999996e-97  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00200515  n/a   
 
 
-
 
NC_007434  BURPS1710b_3587  GTP-dependent nucleic acid-binding protein EngD  52.88 
 
 
364 aa  356  3.9999999999999996e-97  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3569  GTP-dependent nucleic acid-binding protein EngD  52.88 
 
 
364 aa  356  3.9999999999999996e-97  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1521  GTP-dependent nucleic acid-binding protein EngD  52.75 
 
 
363 aa  356  3.9999999999999996e-97  Chromohalobacter salexigens DSM 3043  Bacteria  hitchhiker  0.00078802  n/a   
 
 
-
 
NC_009632  SaurJH1_0422  GTP-dependent nucleic acid-binding protein EngD  50.82 
 
 
365 aa  356  3.9999999999999996e-97  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0242427  n/a   
 
 
-
 
NC_008786  Veis_0466  GTP-binding protein YchF  54.08 
 
 
364 aa  355  5e-97  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_2121  GTP-dependent nucleic acid-binding protein EngD  49.45 
 
 
366 aa  355  5e-97  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.328757  n/a   
 
 
-
 
NC_006349  BMAA0519  GTP-dependent nucleic acid-binding protein EngD  52.88 
 
 
364 aa  355  5.999999999999999e-97  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1923  GTP-dependent nucleic acid-binding protein EngD  52.88 
 
 
364 aa  355  5.999999999999999e-97  Burkholderia mallei NCTC 10247  Bacteria  normal  0.264442  n/a   
 
 
-
 
NC_009076  BURPS1106A_3596  GTP-dependent nucleic acid-binding protein EngD  52.88 
 
 
364 aa  355  5.999999999999999e-97  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0657  GTP-dependent nucleic acid-binding protein EngD  52.88 
 
 
364 aa  355  5.999999999999999e-97  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0952  GTP-dependent nucleic acid-binding protein EngD  52.88 
 
 
364 aa  355  5.999999999999999e-97  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_0894  GTP-dependent nucleic acid-binding protein EngD  50.82 
 
 
363 aa  355  7.999999999999999e-97  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.943704 
 
 
-
 
NC_011726  PCC8801_3090  GTP-dependent nucleic acid-binding protein EngD  52.07 
 
 
363 aa  354  1e-96  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>