| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0155 |
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| Symbol | |
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| ID | 6184174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 136924 |
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| End bp | 138018 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641670879 |
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| Product | GTP-binding protein YchF |
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| Protein accession | YP_001797078 |
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| Protein GI | 171462965 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.611358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 0.940592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTGA AATGTGGTAT CGTCGGCCTG CCTAACGTCG GCAAATCTAC CCTCTTTAAT
GCGCTCACCA AGGCTGGGAT CGCAGCGGAA AATTATCCTT TCTGCACGAT TGAGCCTAAT
GTGGGCGTTG TTGAGGTTCC TGACCCCCGT CTAGCCGCCT TAGCTGAGAT CGTGAAGTCT
GAGCGCATCC TGCCTACAGC AGTCGAATTT GTCGACATTG CTGGTTTGGT AGCTGGTGCC
TCTAAGGGCG AAGGTCTTGG TAATCAGTTC TTGGCGAATA TTCGCGAAAC CGATGCCATT
ACCCATGTGG TTCGCTGTTT TGAGGATCCA AACGTCATTC ACGTTGCTGG AAAAATTGAC
CCTATCGCTG ATATTGGGGT AATTGATACC GAATTGGCGC TCTCAGATTT GGCTACGGTT
GAGAAAACCC TGAATCGCTC AAGCAAGGCT GCAAAGTCTG GCAACGATAA AGAAGCTGCG
GCTTTGGTTG CTGTGCTGAC TAAAGTTCAG GCCCACTTGG ATTCAGCTTT GCCGGTGCGT
AGCTTGAATT TAAGTGATGA CGAAAAGTTA TTAATTAAAC CATTGTGTTT AATTACTGCT
AAGCCTGCCA TGTATGTTGC AAATGTGAAA GAAGGTGGTT TCTCAAATAA TTCGCATCTT
GAGGCTGTGA AACAACATGC TGCAAAAGAA CGAGCTCCAG TTATAGCGGT TTGCGCGGCA
ATTGAAGCGG AAATTGCTGA CTTAGAAGAA GCCGACAAGA TTGAGTTCTT GGCCGACTTG
GGGATGGAAG AGCCAGGCTT GGATCGTGTT ATTCGTGCGG GTTATGCATT GTTAGGATTG
CAAACCTATT TCACTGCTGG CGTTAAAGAG GTTCGTGCCT GGACTATTCA TCAGGGTGAC
ACAGCGCCTC AAGCCGCTGG TGTGATTCAT GCGGATTTTG AGCGTGGCTT TATTCGTGCT
CAAACTATTT CCTATGATGA CTTTGTGCAG TTCAAAGGGG AGGCGGGCGC CAAGGAAGCA
GGCAAGATGC GTGCCGAAGG TAAGGAGTAT GTTGTTAAGG ATGGTGACGT ATTGAACTTC
TTGTTTAACG TCTAG
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| Protein sequence | MSLKCGIVGL PNVGKSTLFN ALTKAGIAAE NYPFCTIEPN VGVVEVPDPR LAALAEIVKS
ERILPTAVEF VDIAGLVAGA SKGEGLGNQF LANIRETDAI THVVRCFEDP NVIHVAGKID
PIADIGVIDT ELALSDLATV EKTLNRSSKA AKSGNDKEAA ALVAVLTKVQ AHLDSALPVR
SLNLSDDEKL LIKPLCLITA KPAMYVANVK EGGFSNNSHL EAVKQHAAKE RAPVIAVCAA
IEAEIADLEE ADKIEFLADL GMEEPGLDRV IRAGYALLGL QTYFTAGVKE VRAWTIHQGD
TAPQAAGVIH ADFERGFIRA QTISYDDFVQ FKGEAGAKEA GKMRAEGKEY VVKDGDVLNF
LFNV
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