Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0517 |
Symbol | |
ID | 3706689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 557673 |
End bp | 558761 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637737027 |
Product | GTP-dependent nucleic acid-binding protein EngD |
Protein accession | YP_342570 |
Protein GI | 77164045 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGATTTA AATGCGGAAT CGTGGGTTTG CCCAATGTGG GTAAATCTAC TTTGTTTAAT GCGCTTACCC AGGCGGGTAT CGAGGCTCAG AATTACCCCT TTTGCACCAT CGATCCTAAT GTGGGTATGG TGCCCATGCC CGATCCAAGA CTGGACAAAA TCGCCGCCAT TGTCCGTCCT CAACAGGTGC TTCCCACCAC CATGATGTTT GTGGATATTG CCGGTCTGGT TGCGGGTGCT TCCCAGGGAG AAGGGCTTGG TAATCAGTTC CTCGCCCATA TCCGCGAGAC GGAAGCTATT GCCCATGTGG TGCGCTGTTT TGAAGACCAA AATGTCATTC ATGTAGCCGG GCAGATCGAT CCCTTGGGGG ATATAGAGGT TATCGACACT GAGCTGGCCC TGGCGGATCT AGAAACGGTA GAAAAGGCTT TATCCCGTGC AACCCGGGCG GCAAAAGCGG ATAAGGACGC CCTTGTCCTC AAAAGTTTGT TGGAGAAGGT GCGGGAGCAC CTGAATGAGG GTAAATCAGT CCGGACCCTG GTGCTTGACC CGGAGGAGTG GAAAGAATTG CAATCCCTGC ATTTACTCAC CTCCAAGCCC GTCCTTTACA TTGCTAATGT GGCTGAGGAT GGCTTTGAGA ACAATCCTTG GCTCAAGGCG CTAGAGGAAT TCGCGGCAAG GGAAAGGGCC GAGGTCGTTC CCGTGTGTGC TGCTATTGAA GCGGAGCTGT CTCAATTGGA TGATGCTGAA AGGGAAGAAT TTTTGGCGGA GTTGGGCATT GAGGAGCCTG GTTTGAACCG GGTCATTCGT GCCGGTTATA AACTGCTGGG CTTGCAAACT TTTTTTACCG CTGGCCCGAA AGAAGTTCGT GCTTGGACGG TTCCCATTGG TGCAACAGCC CCCCAGGCTG CTGGAGTTAT TCATACTGAC TTTGAAAAAG GCTTCATTCG GGCGGAGGTT ATCTCCTATG AAGACTTTAT TGCTTGCCAG GGGGAGCAAG GCGCCAAGGA AGCGGGTAAA TGGCGTCTTG AAGGAAAGGA CTACGTAGTT CAGGATGGCG ATGTCGTGCA TTTTCGCTTC AATGTATAA
|
Protein sequence | MGFKCGIVGL PNVGKSTLFN ALTQAGIEAQ NYPFCTIDPN VGMVPMPDPR LDKIAAIVRP QQVLPTTMMF VDIAGLVAGA SQGEGLGNQF LAHIRETEAI AHVVRCFEDQ NVIHVAGQID PLGDIEVIDT ELALADLETV EKALSRATRA AKADKDALVL KSLLEKVREH LNEGKSVRTL VLDPEEWKEL QSLHLLTSKP VLYIANVAED GFENNPWLKA LEEFAARERA EVVPVCAAIE AELSQLDDAE REEFLAELGI EEPGLNRVIR AGYKLLGLQT FFTAGPKEVR AWTVPIGATA PQAAGVIHTD FEKGFIRAEV ISYEDFIACQ GEQGAKEAGK WRLEGKDYVV QDGDVVHFRF NV
|
| |