Gene Jden_0748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0748 
Symbol 
ID8379932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp816354 
End bp817463 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content58% 
IMG OID645003490 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_003160714 
Protein GI256831987 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCCG TAGACTTACC TCTTGTGGCT CTTACTATTG GAATCGTTGG TCTCCCCAAC 
GTCGGCAAAT CGACCCTCTT CAACGCGCTG ACACGCGCAC AGGTTCTCGC AGCGAACTAC
CCGTTCGCCA CGATTGAACC CAACGTGGGG GTGGTGCCCT TGCCGGACGA ACGGCTCGTG
AAACTCGCCG AGATTTTCTC CTCCGAACGT ATCCTGCCCG CCACTGTCTC CTTCGTGGAC
ATCGCCGGGA TCGTTCGTGG CGCATCGGAA GGTGAGGGAC TAGGGAACAA GTTCCTTGCG
AACATCCGTG AAGCTGACGC GATCTGCCAG GTCACCCGCG CTTTCGCGGA CCCTGACGTG
GTCCACGTGG ATGGGAAAGT ATCCCCCAAG GACGACATTG AAACGATCAA CACTGAACTG
ATCCTCGCTG ACCTGCAAAC CTTGGAAAAA ACGCTGGTGC GGTTGGAAAA AGAAGTAAAA
ATCAAAAAGG GTGACCCCAC CCTCCTTGAG GCAGCGAAAC TCGCCCAAAA AATCCTTGAA
GAAGGCACCA CACTATCCGC TGGGGCAAAG GTCGCAGGAC TGGACCTCAC CGAGGTCGCG
TCGTTGCAGC TCATGACCGC GAAACCCTTC ATTTACGTGT TCAACACCGA CGATGAAGGC
CTCGCGAACA AAGAATTCCA AGCAGAAATC CGTGACATGG TTGCGCCAGC GCAGGCGATC
TTCCTTGACG CGAAGTTCGA ATCTGAACTC GTGGAACTCG AACCCGACGA AGCCGCAGAA
ATGCTCGCCG AAACTGGGCA AGACGAGGCC GGCCTTGACC AACTCGCACG CGTCGGCTTC
GACACCCTTG GCCTGCAAAC CTACCTCACC GCAGGCCCCA AAGAAGCCCG CGCCTGGACC
ATCCGCAAAG GCTGGACTGC CCCCCAAGCT GCAGGCGTCA TCCACACCGA CTTTGAACGT
GGATTCATCA AAGCTGAAGT CATCTCCTTC GACGACCTCG TCGACACCGG GTCAGTCGCC
AACGCCCGCG CCGCCGGAAA AGCCCGCATG GAAGGCAAAG ACTACGTCAT GCAAGACGGC
GACGTGGTGG AATTCCGCTT CAACGTCTGA
 
Protein sequence
MTAVDLPLVA LTIGIVGLPN VGKSTLFNAL TRAQVLAANY PFATIEPNVG VVPLPDERLV 
KLAEIFSSER ILPATVSFVD IAGIVRGASE GEGLGNKFLA NIREADAICQ VTRAFADPDV
VHVDGKVSPK DDIETINTEL ILADLQTLEK TLVRLEKEVK IKKGDPTLLE AAKLAQKILE
EGTTLSAGAK VAGLDLTEVA SLQLMTAKPF IYVFNTDDEG LANKEFQAEI RDMVAPAQAI
FLDAKFESEL VELEPDEAAE MLAETGQDEA GLDQLARVGF DTLGLQTYLT AGPKEARAWT
IRKGWTAPQA AGVIHTDFER GFIKAEVISF DDLVDTGSVA NARAAGKARM EGKDYVMQDG
DVVEFRFNV