More than 300 homologs were found in PanDaTox collection
for query gene Tfu_0473 on replicon NC_007333
Organism: Thermobifida fusca YX



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007333  Tfu_0473  GTP-dependent nucleic acid-binding protein EngD  100 
 
 
364 aa  721    Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0133  GTP-binding protein YchF  81.04 
 
 
361 aa  583  1.0000000000000001e-165  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1095  GTP-binding protein YchF  78.3 
 
 
363 aa  551  1e-156  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0537245  n/a   
 
 
-
 
NC_013595  Sros_8476  GTP-binding protein YchF  74.79 
 
 
362 aa  546  1e-154  Streptosporangium roseum DSM 43021  Bacteria  normal  0.775953  normal 
 
 
-
 
NC_014165  Tbis_3062  GTP-binding protein YchF  76.71 
 
 
362 aa  545  1e-154  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8269  GTP-dependent nucleic acid-binding protein EngD  73.08 
 
 
357 aa  530  1e-149  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_31400  GTP-dependent nucleic acid-binding protein EngD  73.97 
 
 
360 aa  527  1e-148  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.292075 
 
 
-
 
NC_008578  Acel_1861  GTP-dependent nucleic acid-binding protein EngD  73.57 
 
 
373 aa  521  1e-147  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.924801 
 
 
-
 
NC_007777  Francci3_3871  GTP-dependent nucleic acid-binding protein EngD  75 
 
 
358 aa  517  1.0000000000000001e-145  Frankia sp. CcI3  Bacteria  normal  0.479028  normal 
 
 
-
 
NC_013172  Bfae_22930  GTP-dependent nucleic acid-binding protein EngD  67.96 
 
 
361 aa  506  9.999999999999999e-143  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0748  GTP-dependent nucleic acid-binding protein EngD  69.51 
 
 
369 aa  501  1e-141  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0736  GTP-dependent nucleic acid-binding protein EngD  72.8 
 
 
359 aa  501  1e-141  Actinosynnema mirum DSM 43827  Bacteria  normal  0.217905  n/a   
 
 
-
 
NC_013521  Sked_26380  GTP-binding protein YchF  70.05 
 
 
361 aa  503  1e-141  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0845459 
 
 
-
 
NC_009664  Krad_1124  GTP-dependent nucleic acid-binding protein EngD  72.8 
 
 
361 aa  500  1e-140  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.356013 
 
 
-
 
NC_013757  Gobs_1033  GTP-binding protein YchF  74.45 
 
 
357 aa  500  1e-140  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0946  GTP-binding protein YchF  68.41 
 
 
361 aa  498  1e-140  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1080  GTP-dependent nucleic acid-binding protein EngD  71.23 
 
 
359 aa  499  1e-140  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2082  GTP-dependent nucleic acid-binding protein EngD  71.43 
 
 
360 aa  494  1e-139  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.330246  normal  0.125841 
 
 
-
 
NC_013441  Gbro_3392  GTP-binding protein YchF  70.88 
 
 
359 aa  494  1e-139  Gordonia bronchialis DSM 43247  Bacteria  normal  0.180575  n/a   
 
 
-
 
NC_009921  Franean1_0857  GTP-dependent nucleic acid-binding protein EngD  71.43 
 
 
358 aa  495  1e-139  Frankia sp. EAN1pec  Bacteria  normal  0.0266679  normal  0.117665 
 
 
-
 
NC_013235  Namu_4365  GTP-dependent nucleic acid-binding protein EngD  73.35 
 
 
359 aa  492  9.999999999999999e-139  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4102  GTP-dependent nucleic acid-binding protein EngD  70.91 
 
 
376 aa  488  1e-137  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1105  GTP-dependent nucleic acid-binding protein EngD  67.31 
 
 
361 aa  488  1e-137  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.692178 
 
 
-
 
NC_008705  Mkms_4178  GTP-dependent nucleic acid-binding protein EngD  70.91 
 
 
376 aa  488  1e-137  Mycobacterium sp. KMS  Bacteria  normal  0.40111  normal 
 
 
-
 
NC_009380  Strop_3781  GTP-dependent nucleic acid-binding protein EngD  69.51 
 
 
361 aa  484  1e-136  Salinispora tropica CNB-440  Bacteria  normal  normal  0.699286 
 
 
-
 
NC_009953  Sare_4160  GTP-dependent nucleic acid-binding protein EngD  70.6 
 
 
361 aa  486  1e-136  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000134834 
 
 
-
 
NC_009077  Mjls_4333  GTP-dependent nucleic acid-binding protein EngD  70.64 
 
 
376 aa  487  1e-136  Mycobacterium sp. JLS  Bacteria  normal  normal  0.567593 
 
 
-
 
NC_014151  Cfla_0977  GTP-binding protein YchF  70.41 
 
 
358 aa  488  1e-136  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.245774  hitchhiker  0.00114943 
 
 
-
 
NC_014158  Tpau_3101  GTP-binding protein YchF  69.78 
 
 
357 aa  486  1e-136  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2831  GTP-dependent nucleic acid-binding protein EngD  67.03 
 
 
368 aa  486  1e-136  Arthrobacter sp. FB24  Bacteria  normal  0.593989  n/a   
 
 
-
 
NC_008726  Mvan_4625  GTP-dependent nucleic acid-binding protein EngD  71.43 
 
 
360 aa  486  1e-136  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.54824  normal 
 
 
-
 
NC_011886  Achl_2546  GTP-dependent nucleic acid-binding protein EngD  67.58 
 
 
363 aa  480  1e-134  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000002151 
 
 
-
 
NC_013947  Snas_5521  GTP-binding protein YchF  69.7 
 
 
358 aa  476  1e-133  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.633913  normal  0.842427 
 
 
-
 
NC_009565  TBFG_11134  GTP-dependent nucleic acid-binding protein EngD  71.7 
 
 
357 aa  478  1e-133  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_20210  GTP-dependent nucleic acid-binding protein EngD  69.51 
 
 
361 aa  470  1.0000000000000001e-131  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.640353  normal  0.191287 
 
 
-
 
NC_013721  HMPREF0424_0648  GTP-binding protein YchF  63.01 
 
 
362 aa  466  9.999999999999999e-131  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.379901 
 
 
-
 
NC_012803  Mlut_16190  GTP-dependent nucleic acid-binding protein EngD  68.91 
 
 
354 aa  462  1e-129  Micrococcus luteus NCTC 2665  Bacteria  normal  0.938895  n/a   
 
 
-
 
NC_010816  BLD_0667  GTP-dependent nucleic acid-binding protein EngD  61.64 
 
 
364 aa  441  9.999999999999999e-123  Bifidobacterium longum DJO10A  Bacteria  normal  0.416643  n/a   
 
 
-
 
NC_013203  Apar_0186  GTP-binding protein YchF  56.83 
 
 
354 aa  392  1e-108  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.448936 
 
 
-
 
NC_011901  Tgr7_0530  GTP-dependent nucleic acid-binding protein EngD  55.01 
 
 
363 aa  387  1e-106  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2368  GTP-dependent nucleic acid-binding protein EngD  55.56 
 
 
363 aa  385  1e-106  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3547  GTP-dependent nucleic acid-binding protein EngD  53.56 
 
 
366 aa  386  1e-106  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008789  Hhal_0986  GTP-binding protein YchF  55.59 
 
 
363 aa  386  1e-106  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_11960  GTP-binding protein YchF  57.22 
 
 
354 aa  383  1e-105  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.642415  normal 
 
 
-
 
NC_013204  Elen_1055  GTP-binding protein YchF  55.59 
 
 
354 aa  380  1e-104  Eggerthella lenta DSM 2243  Bacteria  normal  0.0763151  hitchhiker  0.00159487 
 
 
-
 
NC_013889  TK90_0348  GTP-binding protein YchF  56.1 
 
 
364 aa  378  1e-104  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.214484 
 
 
-
 
NC_008254  Meso_2159  GTP-dependent nucleic acid-binding protein EngD  54.55 
 
 
367 aa  381  1e-104  Chelativorans sp. BNC1  Bacteria  normal  0.470887  n/a   
 
 
-
 
NC_006368  lpp2707  GTP-dependent nucleic acid-binding protein EngD  53.12 
 
 
363 aa  375  1e-103  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007404  Tbd_0390  GTP-dependent nucleic acid-binding protein EngD  55.56 
 
 
363 aa  375  1e-103  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.997224  normal  0.0213751 
 
 
-
 
NC_007643  Rru_A3748  GTP-dependent nucleic acid-binding protein EngD  54.74 
 
 
367 aa  376  1e-103  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3418  GTP-dependent nucleic acid-binding protein EngD  51.99 
 
 
366 aa  377  1e-103  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000016062  n/a   
 
 
-
 
NC_013205  Aaci_2931  GTP-binding protein YchF  54.72 
 
 
366 aa  377  1e-103  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0027  GTP-binding protein YchF  53.91 
 
 
366 aa  376  1e-103  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0286  GTP-binding protein YchF  55.74 
 
 
363 aa  376  1e-103  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.79515 
 
 
-
 
NC_011772  BCG9842_B5333  GTP-dependent nucleic acid-binding protein EngD  51.19 
 
 
366 aa  372  1e-102  Bacillus cereus G9842  Bacteria  hitchhiker  0.000128538  hitchhiker  0.000000465437 
 
 
-
 
NC_009674  Bcer98_4015  GTP-dependent nucleic acid-binding protein EngD  51.19 
 
 
366 aa  373  1e-102  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.362655  n/a   
 
 
-
 
NC_003909  BCE_5626  GTP-dependent nucleic acid-binding protein EngD  51.05 
 
 
366 aa  372  1e-102  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000871672  n/a   
 
 
-
 
NC_006369  lpl2579  GTP-dependent nucleic acid-binding protein EngD  52.85 
 
 
363 aa  374  1e-102  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007484  Noc_0517  GTP-dependent nucleic acid-binding protein EngD  53.55 
 
 
362 aa  373  1e-102  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2000  GTP-dependent nucleic acid-binding protein EngD  52.17 
 
 
364 aa  372  1e-102  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0365484  n/a   
 
 
-
 
NC_011725  BCB4264_A5602  GTP-dependent nucleic acid-binding protein EngD  51.05 
 
 
366 aa  372  1e-102  Bacillus cereus B4264  Bacteria  normal  0.0104876  n/a   
 
 
-
 
NC_008025  Dgeo_1574  GTP-dependent nucleic acid-binding protein EngD  54.45 
 
 
365 aa  372  1e-102  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.796627 
 
 
-
 
NC_011899  Hore_23370  GTP-binding protein YchF  54.62 
 
 
364 aa  373  1e-102  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000000155952  n/a   
 
 
-
 
NC_011658  BCAH187_A5663  GTP-dependent nucleic acid-binding protein EngD  50.79 
 
 
366 aa  370  1e-101  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000189692  n/a   
 
 
-
 
NC_005945  BAS5328  GTP-dependent nucleic acid-binding protein EngD  50.79 
 
 
366 aa  370  1e-101  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00440809  n/a   
 
 
-
 
NC_005957  BT9727_5156  GTP-dependent nucleic acid-binding protein EngD  50.79 
 
 
366 aa  370  1e-101  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.474948  n/a   
 
 
-
 
NC_006274  BCZK5172  GTP-dependent nucleic acid-binding protein EngD  50.79 
 
 
366 aa  370  1e-101  Bacillus cereus E33L  Bacteria  decreased coverage  0.000341574  n/a   
 
 
-
 
NC_007347  Reut_A3037  GTP-dependent nucleic acid-binding protein EngD  55.16 
 
 
387 aa  368  1e-101  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0887  GTP-binding protein YchF  54.1 
 
 
364 aa  370  1e-101  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0231852  normal  0.589868 
 
 
-
 
NC_007530  GBAA_5724  GTP-dependent nucleic acid-binding protein EngD  50.79 
 
 
366 aa  370  1e-101  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.000153579  n/a   
 
 
-
 
NC_010001  Cphy_2482  GTP-binding protein YchF  51.9 
 
 
365 aa  369  1e-101  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1521  GTP-dependent nucleic acid-binding protein EngD  52.73 
 
 
363 aa  369  1e-101  Chromohalobacter salexigens DSM 3043  Bacteria  hitchhiker  0.00078802  n/a   
 
 
-
 
NC_008044  TM1040_0224  GTP-dependent nucleic acid-binding protein EngD  53.39 
 
 
365 aa  370  1e-101  Ruegeria sp. TM1040  Bacteria  normal  0.626495  normal 
 
 
-
 
NC_008060  Bcen_2581  GTP-dependent nucleic acid-binding protein EngD  54.62 
 
 
364 aa  369  1e-101  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5585  GTP-dependent nucleic acid-binding protein EngD  50.79 
 
 
366 aa  370  1e-101  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000269 
 
 
-
 
NC_008786  Veis_0466  GTP-binding protein YchF  53.91 
 
 
364 aa  368  1e-101  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0496  GTP-dependent nucleic acid-binding protein EngD  54.62 
 
 
364 aa  369  1e-101  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1534  GTP-binding protein YchF  53.93 
 
 
364 aa  368  1e-101  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.452605 
 
 
-
 
NC_008542  Bcen2424_0524  GTP-dependent nucleic acid-binding protein EngD  54.62 
 
 
364 aa  369  1e-101  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA2032  GTP-dependent nucleic acid-binding protein EngD  53.64 
 
 
363 aa  365  1e-100  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_2510  GTP-dependent nucleic acid-binding protein EngD  53.08 
 
 
365 aa  367  1e-100  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.566797  normal  0.501348 
 
 
-
 
NC_007434  BURPS1710b_3587  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
364 aa  365  1e-100  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2928  GTP-binding protein YchF  54.08 
 
 
364 aa  368  1e-100  Acidovorax ebreus TPSY  Bacteria  normal  0.79075  n/a   
 
 
-
 
NC_007510  Bcep18194_A3611  GTP-dependent nucleic acid-binding protein EngD  54.35 
 
 
364 aa  366  1e-100  Burkholderia sp. 383  Bacteria  normal  normal  0.850292 
 
 
-
 
NC_009012  Cthe_0877  GTP-dependent nucleic acid-binding protein EngD  50.94 
 
 
364 aa  367  1e-100  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00007173  n/a   
 
 
-
 
NC_008782  Ajs_3618  GTP-binding protein YchF  54.08 
 
 
364 aa  368  1e-100  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_0395  GTP-dependent nucleic acid-binding protein EngD  51.91 
 
 
363 aa  367  1e-100  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00186596  n/a   
 
 
-
 
NC_007604  Synpcc7942_0554  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
363 aa  365  1e-100  Synechococcus elongatus PCC 7942  Bacteria  normal  0.268556  normal 
 
 
-
 
NC_010084  Bmul_2871  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
364 aa  367  1e-100  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.103234  normal  0.491395 
 
 
-
 
NC_009952  Dshi_0954  GTP-dependent nucleic acid-binding protein EngD  53.95 
 
 
365 aa  367  1e-100  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_21870  GTP-binding protein YchF  52.88 
 
 
354 aa  365  1e-100  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.0475417 
 
 
-
 
NC_007973  Rmet_3193  GTP-dependent nucleic acid-binding protein EngD  55.68 
 
 
363 aa  367  1e-100  Cupriavidus metallidurans CH34  Bacteria  normal  0.36162  normal 
 
 
-
 
NC_009074  BURPS668_3569  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
364 aa  365  1e-100  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0952  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
364 aa  364  1e-99  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1923  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
364 aa  364  1e-99  Burkholderia mallei NCTC 10247  Bacteria  normal  0.264442  n/a   
 
 
-
 
NC_006349  BMAA0519  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
364 aa  364  1e-99  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0657  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
364 aa  364  1e-99  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3596  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
364 aa  364  1e-99  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0429  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
364 aa  364  1e-99  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0453  GTP-dependent nucleic acid-binding protein EngD  54.08 
 
 
364 aa  364  1e-99  Burkholderia ambifaria MC40-6  Bacteria  normal  0.660955  normal  0.0338644 
 
 
-
 
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