| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_21870 |
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| Symbol | |
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| ID | 8396076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2422370 |
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| End bp | 2423434 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644986935 |
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| Product | GTP-binding protein YchF |
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| Protein accession | YP_003144546 |
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| Protein GI | 257064874 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0475417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTTT CCATCGGTAT AGTCGGCCTG CCCAACGTGG GCAAGTCCTC GCTGTTCACG
GCCCTGACTA AGAAGACGGG CCTTGCCGCC AACTACCCGT TCGCCACCAT CGACCCCAAC
GTGGGCATGG TGCCCGTCCC CGATACGCGT CTTGAGGAGC TGGCAAAGAT CGACCATCCT
GCCAAGATCA TTCCCGCAAC GGTCGAATTC GTCGATATCG CAGGTCTGGT GGCCGGCGCC
AGCCAAGGCG AAGGCCTGGG CAACAAGTTC CTCGCCAACA TCCGCGAGAC CGATGCCATC
TGCGAGGTCG TCAGGTTCTT CTCCGACCCC AACGTTGAGC ATGTCTCCAA AAAGGTGGAC
CCGCAGTCCG ACGTGGACAC CATCAAGACC GAGCTCATCC TGGCTGATAT GGCCACGTTG
GAAAAGGCCA TCCCTCGTCT GGAGAAGGAA GCCAAACGCG ACAAGGACGG CGTGTTCAAG
CTTGAAACAG CCAAAAAGGT GTACGCGGGG CTGGAAGAGG AGCACCGCGC GCTGACGCTC
GGTCTGTCCG ATGACGAAAA GGCCGCCATC AAGGATTTGT GCCTGCTTAC CATGAAACCC
ATGCTCTACA TCGCCAACGT GGACGAAGAC AAAATGGATA TGGAGCTGCC TGAAATCGAC
GGCCAGATTC CTGTGCCTAT CAGCGCGAAG ATCGAAGCCG ACCTCTCCGA GCTGGAGCCC
GACGAGGCCG CCATGTTCAT GGAGGAGCTG GGCATCAAAG AGAGCGGCTT GTCCCGTCTG
ATCCACGAGG CGTACCGTCT GCTGGGCCTG CAGAGCTACT TCACCAGCGG CCCTGACGAG
ACCCGCGCCT GGACCATTCC CGTGGGTGCG AAGGCGCCGC AAGCCGCAAG CGTCATCCAC
ACCGACTTCG AGCGCGGCTT CATCAAGGCC GAAACTGCCA GCTACGAGGA CTATGTGCGG
CTCGGGGGCG AAAAGGGCTG CCGCGATGCC GGCCGTCTGC GCCAGGAGGG CAAGGAGTAC
GTCGTTCAGG ACGGCGACAT CATGCATTTC AAGTTCAACG TGTAA
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| Protein sequence | MSLSIGIVGL PNVGKSSLFT ALTKKTGLAA NYPFATIDPN VGMVPVPDTR LEELAKIDHP
AKIIPATVEF VDIAGLVAGA SQGEGLGNKF LANIRETDAI CEVVRFFSDP NVEHVSKKVD
PQSDVDTIKT ELILADMATL EKAIPRLEKE AKRDKDGVFK LETAKKVYAG LEEEHRALTL
GLSDDEKAAI KDLCLLTMKP MLYIANVDED KMDMELPEID GQIPVPISAK IEADLSELEP
DEAAMFMEEL GIKESGLSRL IHEAYRLLGL QSYFTSGPDE TRAWTIPVGA KAPQAASVIH
TDFERGFIKA ETASYEDYVR LGGEKGCRDA GRLRQEGKEY VVQDGDIMHF KFNV
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