Gene Ksed_20210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20210 
Symbol 
ID8373525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2102100 
End bp2103185 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content67% 
IMG OID644992271 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_003149781 
Protein GI256825821 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.640353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.191287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACTCA CCATCGGAAT CGTCGGTCTC CCCAACGTCG GCAAGTCGAC CATGTTCAAC 
GCGCTGACCA AGAACAACGT GCTCGCCGCG AACTACCCGT TCGCGACGAT CGAGCCGAAC
GTGGGCGTGG TCCCGCTGCC GGACGAGCGG CTGGCGCGGC TGGCCGAGAT CTTCGGTTCG
GAGAAGATCC TGCCGGCGAC GGTGAGCTTC GTGGACATCG CCGGCATCGT GCGCGGCGCC
TCCGAGGGGG AGGGGCTGGG CAACAAGTTC CTCGCCAACA TCCGCGAGGC CGACGCGATC
TGCCAGGTGG TCCGCGCCTT CGTGGACACC GACGTGCACC ACGTCGACGG TCGCGTCGAC
CCGGCGGGTG ACCTCGAGAC GATCAACACC GAGCTGGTGC TCGCCGACCT GCAGACCCTC
GAGAACGCGA TCCCGCGCCT CGAGAAGGAG GTCAAGGGCA AGAAGATCGA GAAGTCGGTG
CTCGACACCG CCGTCAAGGC CCGCGGTGTG CTGGAGGAGG GCCATACGCT CTTCGCCCGT
GGTGAGGCCG CCGGAGTCGA CATGGAGGAG GCCGCGCAGC TGGGTCTGCT CACCACCAAG
CCGTTCATCT ACGTGATCAA CGTGGACGAG GACCAGGTGA CCGACGACGC GTTCAAGGCG
CGCATGAGCG AGCTGGTGGC CCCGGCGGAC GCGATCTTCC TCAACGCGCA GCTGGAGTCC
GAGCTGGCCG AGCTGGACGA GGCCGAGGCC GCGGAGCTGC TGGAGAGCGT CGGCATCGAC
GAGCCGGGGC TGCACCAGCT GGCGCGCAAG GGATTCCACA CCCTGGGGCT GCAGACCTAC
CTGACGGCCG GGCCCAAGGA GACGCGCGCC TGGACGATCC ACAAGGGCTG GACCGCCCCG
AAGGCTGCCG GCGTGATCCA CACGGACTTC GAGAAGGGCT TCATCAAGGC TGAGGTGGTG
AGCTTCGAGG ACCTGGACGA GCTGGGCTCG ATGAACGCCG CCAAGGAGGC CGGCAAGGTC
CGCATGGAGG GCAAGGAGTA CGTCATGGCC GACGGCGACG TGGTGGAGTT CCGGTTCAAC
GTCTAG
 
Protein sequence
MALTIGIVGL PNVGKSTMFN ALTKNNVLAA NYPFATIEPN VGVVPLPDER LARLAEIFGS 
EKILPATVSF VDIAGIVRGA SEGEGLGNKF LANIREADAI CQVVRAFVDT DVHHVDGRVD
PAGDLETINT ELVLADLQTL ENAIPRLEKE VKGKKIEKSV LDTAVKARGV LEEGHTLFAR
GEAAGVDMEE AAQLGLLTTK PFIYVINVDE DQVTDDAFKA RMSELVAPAD AIFLNAQLES
ELAELDEAEA AELLESVGID EPGLHQLARK GFHTLGLQTY LTAGPKETRA WTIHKGWTAP
KAAGVIHTDF EKGFIKAEVV SFEDLDELGS MNAAKEAGKV RMEGKEYVMA DGDVVEFRFN
V