More than 300 homologs were found in PanDaTox collection
for query gene Xcel_0946 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013530  Xcel_0946  GTP-binding protein YchF  100 
 
 
361 aa  720    Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_26380  GTP-binding protein YchF  83.1 
 
 
361 aa  602  1.0000000000000001e-171  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0845459 
 
 
-
 
NC_013174  Jden_0748  GTP-dependent nucleic acid-binding protein EngD  81.99 
 
 
369 aa  591  1e-168  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0977  GTP-binding protein YchF  83.7 
 
 
358 aa  584  1e-166  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.245774  hitchhiker  0.00114943 
 
 
-
 
NC_012669  Bcav_1105  GTP-dependent nucleic acid-binding protein EngD  77.56 
 
 
361 aa  563  1.0000000000000001e-159  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.692178 
 
 
-
 
NC_013172  Bfae_22930  GTP-dependent nucleic acid-binding protein EngD  76.32 
 
 
361 aa  558  1e-158  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2831  GTP-dependent nucleic acid-binding protein EngD  75.07 
 
 
368 aa  541  1e-153  Arthrobacter sp. FB24  Bacteria  normal  0.593989  n/a   
 
 
-
 
NC_011886  Achl_2546  GTP-dependent nucleic acid-binding protein EngD  74.79 
 
 
363 aa  531  1e-150  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000002151 
 
 
-
 
NC_013510  Tcur_1095  GTP-binding protein YchF  72.73 
 
 
363 aa  514  1.0000000000000001e-145  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0537245  n/a   
 
 
-
 
NC_013131  Caci_8269  GTP-dependent nucleic acid-binding protein EngD  70.36 
 
 
357 aa  513  1e-144  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_31400  GTP-dependent nucleic acid-binding protein EngD  72.1 
 
 
360 aa  513  1e-144  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.292075 
 
 
-
 
NC_009664  Krad_1124  GTP-dependent nucleic acid-binding protein EngD  72.85 
 
 
361 aa  504  9.999999999999999e-143  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.356013 
 
 
-
 
NC_014158  Tpau_3101  GTP-binding protein YchF  72.3 
 
 
357 aa  502  1e-141  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8476  GTP-binding protein YchF  69.06 
 
 
362 aa  503  1e-141  Streptosporangium roseum DSM 43021  Bacteria  normal  0.775953  normal 
 
 
-
 
NC_013169  Ksed_20210  GTP-dependent nucleic acid-binding protein EngD  71.75 
 
 
361 aa  498  1e-140  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.640353  normal  0.191287 
 
 
-
 
NC_007333  Tfu_0473  GTP-dependent nucleic acid-binding protein EngD  68.41 
 
 
364 aa  498  1e-140  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0133  GTP-binding protein YchF  68.96 
 
 
361 aa  495  1e-139  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0736  GTP-dependent nucleic acid-binding protein EngD  71.47 
 
 
359 aa  493  9.999999999999999e-139  Actinosynnema mirum DSM 43827  Bacteria  normal  0.217905  n/a   
 
 
-
 
NC_009953  Sare_4160  GTP-dependent nucleic acid-binding protein EngD  68.98 
 
 
361 aa  490  1e-137  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000134834 
 
 
-
 
NC_013441  Gbro_3392  GTP-binding protein YchF  70.36 
 
 
359 aa  489  1e-137  Gordonia bronchialis DSM 43247  Bacteria  normal  0.180575  n/a   
 
 
-
 
NC_009380  Strop_3781  GTP-dependent nucleic acid-binding protein EngD  68.7 
 
 
361 aa  491  1e-137  Salinispora tropica CNB-440  Bacteria  normal  normal  0.699286 
 
 
-
 
NC_008726  Mvan_4625  GTP-dependent nucleic acid-binding protein EngD  70.64 
 
 
360 aa  485  1e-136  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.54824  normal 
 
 
-
 
NC_013721  HMPREF0424_0648  GTP-binding protein YchF  65.19 
 
 
362 aa  483  1e-135  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.379901 
 
 
-
 
NC_013235  Namu_4365  GTP-dependent nucleic acid-binding protein EngD  70.08 
 
 
359 aa  478  1e-134  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3062  GTP-binding protein YchF  67.68 
 
 
362 aa  480  1e-134  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2082  GTP-dependent nucleic acid-binding protein EngD  69.81 
 
 
360 aa  479  1e-134  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.330246  normal  0.125841 
 
 
-
 
NC_008699  Noca_1080  GTP-dependent nucleic acid-binding protein EngD  69.61 
 
 
359 aa  481  1e-134  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4102  GTP-dependent nucleic acid-binding protein EngD  68.52 
 
 
376 aa  474  1e-133  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4178  GTP-dependent nucleic acid-binding protein EngD  68.52 
 
 
376 aa  474  1e-133  Mycobacterium sp. KMS  Bacteria  normal  0.40111  normal 
 
 
-
 
NC_012803  Mlut_16190  GTP-dependent nucleic acid-binding protein EngD  72.03 
 
 
354 aa  473  1e-132  Micrococcus luteus NCTC 2665  Bacteria  normal  0.938895  n/a   
 
 
-
 
NC_009077  Mjls_4333  GTP-dependent nucleic acid-binding protein EngD  68.52 
 
 
376 aa  473  1e-132  Mycobacterium sp. JLS  Bacteria  normal  normal  0.567593 
 
 
-
 
NC_013947  Snas_5521  GTP-binding protein YchF  66.94 
 
 
358 aa  473  1e-132  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.633913  normal  0.842427 
 
 
-
 
NC_009921  Franean1_0857  GTP-dependent nucleic acid-binding protein EngD  66.76 
 
 
358 aa  469  1.0000000000000001e-131  Frankia sp. EAN1pec  Bacteria  normal  0.0266679  normal  0.117665 
 
 
-
 
NC_010816  BLD_0667  GTP-dependent nucleic acid-binding protein EngD  65.47 
 
 
364 aa  469  1.0000000000000001e-131  Bifidobacterium longum DJO10A  Bacteria  normal  0.416643  n/a   
 
 
-
 
NC_007777  Francci3_3871  GTP-dependent nucleic acid-binding protein EngD  67.31 
 
 
358 aa  466  9.999999999999999e-131  Frankia sp. CcI3  Bacteria  normal  0.479028  normal 
 
 
-
 
NC_008578  Acel_1861  GTP-dependent nucleic acid-binding protein EngD  64.58 
 
 
373 aa  466  9.999999999999999e-131  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.924801 
 
 
-
 
NC_013757  Gobs_1033  GTP-binding protein YchF  68.14 
 
 
357 aa  460  9.999999999999999e-129  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11134  GTP-dependent nucleic acid-binding protein EngD  68.42 
 
 
357 aa  459  9.999999999999999e-129  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1055  GTP-binding protein YchF  56.99 
 
 
354 aa  387  1e-106  Eggerthella lenta DSM 2243  Bacteria  normal  0.0763151  hitchhiker  0.00159487 
 
 
-
 
NC_013170  Ccur_11960  GTP-binding protein YchF  56.59 
 
 
354 aa  385  1e-106  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.642415  normal 
 
 
-
 
NC_013203  Apar_0186  GTP-binding protein YchF  56.01 
 
 
354 aa  388  1e-106  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.448936 
 
 
-
 
NC_013173  Dbac_0442  GTP-binding protein YchF  53.6 
 
 
366 aa  366  1e-100  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.637193  n/a   
 
 
-
 
NC_013165  Shel_21870  GTP-binding protein YchF  53.55 
 
 
354 aa  367  1e-100  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.0475417 
 
 
-
 
NC_008751  Dvul_1647  GTP-dependent nucleic acid-binding protein EngD  54.03 
 
 
366 aa  365  1e-100  Desulfovibrio vulgaris DP4  Bacteria  normal  0.429909  normal  0.918011 
 
 
-
 
NC_007404  Tbd_0390  GTP-dependent nucleic acid-binding protein EngD  54.57 
 
 
363 aa  363  2e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.997224  normal  0.0213751 
 
 
-
 
NC_011901  Tgr7_0530  GTP-dependent nucleic acid-binding protein EngD  51.76 
 
 
363 aa  363  3e-99  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3547  GTP-dependent nucleic acid-binding protein EngD  50.95 
 
 
366 aa  361  9e-99  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_2368  GTP-dependent nucleic acid-binding protein EngD  51.76 
 
 
363 aa  360  2e-98  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0348  GTP-binding protein YchF  53.26 
 
 
364 aa  357  9.999999999999999e-98  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.214484 
 
 
-
 
NC_010001  Cphy_2482  GTP-binding protein YchF  50.67 
 
 
365 aa  356  2.9999999999999997e-97  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl2579  GTP-dependent nucleic acid-binding protein EngD  51.34 
 
 
363 aa  355  5e-97  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_006368  lpp2707  GTP-dependent nucleic acid-binding protein EngD  51.07 
 
 
363 aa  355  6.999999999999999e-97  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007204  Psyc_0894  GTP-dependent nucleic acid-binding protein EngD  50.95 
 
 
363 aa  354  1e-96  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.943704 
 
 
-
 
NC_011145  AnaeK_4473  GTP-dependent nucleic acid-binding protein EngD  53.64 
 
 
370 aa  354  1e-96  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4337  GTP-dependent nucleic acid-binding protein EngD  53.64 
 
 
370 aa  354  1e-96  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.966103  n/a   
 
 
-
 
NC_011891  A2cp1_4492  GTP-dependent nucleic acid-binding protein EngD  53.64 
 
 
370 aa  354  1e-96  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3096  GTP-binding protein YchF  54.55 
 
 
367 aa  353  2e-96  Opitutus terrae PB90-1  Bacteria  normal  normal  0.156001 
 
 
-
 
NC_012560  Avin_41550  GTP-dependent nucleic acid-binding protein EngD  50.54 
 
 
366 aa  354  2e-96  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1008  GTP-dependent nucleic acid-binding protein EngD  51.1 
 
 
363 aa  353  2e-96  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000000208433  normal  0.179939 
 
 
-
 
NC_008322  Shewmr7_1073  GTP-dependent nucleic acid-binding protein EngD  51.1 
 
 
363 aa  353  2e-96  Shewanella sp. MR-7  Bacteria  unclonable  0.00000596539  normal  0.137935 
 
 
-
 
NC_008577  Shewana3_1012  GTP-dependent nucleic acid-binding protein EngD  51.1 
 
 
363 aa  353  2e-96  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00042531  normal  0.0638456 
 
 
-
 
NC_009438  Sputcn32_2852  GTP-dependent nucleic acid-binding protein EngD  51.37 
 
 
363 aa  353  2.9999999999999997e-96  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.0000000959871  n/a   
 
 
-
 
NC_011729  PCC7424_0231  GTP-dependent nucleic acid-binding protein EngD  52.34 
 
 
363 aa  353  2.9999999999999997e-96  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.375519 
 
 
-
 
NC_008345  Sfri_0717  GTP-dependent nucleic acid-binding protein EngD  51.65 
 
 
363 aa  353  2.9999999999999997e-96  Shewanella frigidimarina NCIMB 400  Bacteria  decreased coverage  0.000164209  n/a   
 
 
-
 
NC_011769  DvMF_0234  GTP-dependent nucleic acid-binding protein EngD  52.57 
 
 
366 aa  353  4e-96  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0453052 
 
 
-
 
NC_009524  PsycPRwf_1909  GTP-dependent nucleic acid-binding protein EngD  51.77 
 
 
363 aa  352  4e-96  Psychrobacter sp. PRwf-1  Bacteria  normal  0.186477  normal 
 
 
-
 
NC_010655  Amuc_0445  GTP-binding protein YchF  51.46 
 
 
373 aa  352  5.9999999999999994e-96  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.0330999  normal 
 
 
-
 
NC_008825  Mpe_A3166  putative GTP-binding protein  53.41 
 
 
364 aa  352  5.9999999999999994e-96  Methylibium petroleiphilum PM1  Bacteria  normal  hitchhiker  0.00563466 
 
 
-
 
NC_007520  Tcr_0395  GTP-dependent nucleic acid-binding protein EngD  50.27 
 
 
363 aa  352  7e-96  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00186596  n/a   
 
 
-
 
NC_004578  PSPTO_1101  GTP-binding protein YchF  49.87 
 
 
366 aa  350  1e-95  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1521  GTP-dependent nucleic acid-binding protein EngD  50.81 
 
 
363 aa  351  1e-95  Chromohalobacter salexigens DSM 3043  Bacteria  hitchhiker  0.00078802  n/a   
 
 
-
 
NC_007969  Pcryo_1524  GTP-dependent nucleic acid-binding protein EngD  50.68 
 
 
363 aa  351  1e-95  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3435  GTP-dependent nucleic acid-binding protein EngD  50.55 
 
 
363 aa  350  2e-95  Shewanella baltica OS195  Bacteria  unclonable  0.000000360155  hitchhiker  0.00065537 
 
 
-
 
NC_011663  Sbal223_1110  GTP-dependent nucleic acid-binding protein EngD  50.55 
 
 
363 aa  350  2e-95  Shewanella baltica OS223  Bacteria  hitchhiker  0.000000114321  hitchhiker  0.00000000131179 
 
 
-
 
NC_007947  Mfla_0675  GTP-dependent nucleic acid-binding protein EngD  52.3 
 
 
361 aa  350  2e-95  Methylobacillus flagellatus KT  Bacteria  normal  0.762559  normal 
 
 
-
 
NC_009253  Dred_1280  GTP-binding protein YchF  50.94 
 
 
367 aa  350  2e-95  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3299  GTP-dependent nucleic acid-binding protein EngD  50.55 
 
 
363 aa  350  2e-95  Shewanella baltica OS185  Bacteria  unclonable  0.0000000000459769  n/a   
 
 
-
 
NC_008309  HS_0503  GTP-dependent nucleic acid-binding protein EngD  50.14 
 
 
363 aa  350  3e-95  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_3030  GTP-dependent nucleic acid-binding protein EngD  53.28 
 
 
363 aa  349  4e-95  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_3090  GTP-dependent nucleic acid-binding protein EngD  53.28 
 
 
363 aa  349  4e-95  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010717  PXO_04539  GTP-dependent nucleic acid-binding protein EngD  51.91 
 
 
363 aa  349  4e-95  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.910533  n/a   
 
 
-
 
NC_006055  Mfl660  GTP-dependent nucleic acid-binding protein EngD  49.73 
 
 
364 aa  349  5e-95  Mesoplasma florum L1  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0517  GTP-dependent nucleic acid-binding protein EngD  50.82 
 
 
362 aa  348  7e-95  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1574  GTP-dependent nucleic acid-binding protein EngD  54.86 
 
 
365 aa  348  7e-95  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.796627 
 
 
-
 
NC_008752  Aave_0887  GTP-binding protein YchF  51.9 
 
 
364 aa  348  7e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0231852  normal  0.589868 
 
 
-
 
NC_007298  Daro_3733  GTP-dependent nucleic acid-binding protein EngD  52.3 
 
 
363 aa  348  8e-95  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.316822 
 
 
-
 
NC_007005  Psyr_0941  GTP-dependent nucleic acid-binding protein EngD  49.33 
 
 
366 aa  348  9e-95  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.510815 
 
 
-
 
NC_002977  MCA2032  GTP-dependent nucleic acid-binding protein EngD  50.55 
 
 
363 aa  348  1e-94  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2928  GTP-binding protein YchF  52.43 
 
 
364 aa  348  1e-94  Acidovorax ebreus TPSY  Bacteria  normal  0.79075  n/a   
 
 
-
 
NC_009952  Dshi_0954  GTP-dependent nucleic acid-binding protein EngD  51.76 
 
 
365 aa  348  1e-94  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3618  GTP-binding protein YchF  52.43 
 
 
364 aa  348  1e-94  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_0286  GTP-binding protein YchF  51.63 
 
 
363 aa  348  1e-94  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.79515 
 
 
-
 
NC_011662  Tmz1t_3631  GTP-dependent nucleic acid-binding protein EngD  52.28 
 
 
363 aa  347  2e-94  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1185  GTP-dependent nucleic acid-binding protein EngD  50 
 
 
363 aa  347  2e-94  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_4756  GTP-dependent nucleic acid-binding protein EngD  49.6 
 
 
366 aa  347  2e-94  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.586629  normal  0.439463 
 
 
-
 
NC_009052  Sbal_3257  GTP-dependent nucleic acid-binding protein EngD  50.27 
 
 
363 aa  347  2e-94  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000000720126  n/a   
 
 
-
 
NC_012793  GWCH70_3418  GTP-dependent nucleic acid-binding protein EngD  48.92 
 
 
366 aa  347  2e-94  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000016062  n/a   
 
 
-
 
NC_008228  Patl_2571  GTP-dependent nucleic acid-binding protein EngD  49.45 
 
 
363 aa  347  2e-94  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5323  GTP-dependent nucleic acid-binding protein EngD  50 
 
 
366 aa  346  3e-94  Pseudomonas aeruginosa PA7  Bacteria  normal  0.207284  n/a   
 
 
-
 
NC_008700  Sama_2571  GTP-dependent nucleic acid-binding protein EngD  49.73 
 
 
363 aa  346  3e-94  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00000069275  normal  0.128339 
 
 
-
 
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