| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0717 |
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| Symbol | |
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| ID | 4278359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 841979 |
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| End bp | 843070 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133481 |
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| Product | GTP-dependent nucleic acid-binding protein EngD |
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| Protein accession | YP_749413 |
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| Protein GI | 114561900 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000164209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTTA AATGCGGCAT TGTTGGTCTG CCAAACGTAG GTAAGTCAAC GTTGTTTAAT
GCGTTAACAC AAGCGGGTAT TGAAGCGGCA AACTTTCCGT TTTGCACTAT TGAGCCAAAC
ACGGGTGTGG TACCGGTACC AGATGCACGT CTTGATGCGT TAGCTGCTAT TGTTAAACCT
CAACGTATTT TACCTACTTC TATGGAGTTC GTTGATATCG CTGGTCTAGT GGCTGGTGCA
TCGAAAGGTG AAGGCTTAGG TAACAAGTTT TTAGCTAACA TTCGTGAAAC TGATGCTATT
GGTCACGTAG TACGTTGTTT TGAAGATCCA AACATTGTTC ACGTAGCCAA CAAAATTGAC
CCCGCTGGCG ATATTGAAGT CATTAATACT GAGTTAGCTC TAGCAGACTT AGACGCATGC
GAACGCGCTA TTTTTCGTCA AGCTAAGCGT GCTAAAGGCG GCGACGGCGA TGCGAAATTT
GAAGTCGCAG TACTTGAAAA AATGCGTCCA GTGTTAAACG AAGGCCAAAT GTTGCGTTCG
TTGGAATTAA CTAAAGAAGA GTTAGCAGCC GTTGCATACC TTAACTTCTT GACCATTAAA
CCCACAATGT ACATTGCTAA CGTTGCTGAC GATGGTTTTG AAAACAACCC TCATTTAGAT
GTTGTTCGTG CTATTGCCGC AACAGAAAAT GCTATCGTTG TGCCTGTATG TGCTGCTATT
GAGTCTGAAT TAGCTGAAAT GGAAGCTGAT GACCGCGCAG AATTTATGGC TGACCTTGGT
TTAGAAGAGT CTGGTTTAGA TCGCGTAATT CGTGCAGGTT ACGAATTACT GAATCTGCAA
ACTTACTTTA CTGCAGGTGT AAAAGAAGTT CGCGCATGGA CAGTACCCGT TGGTGCTTCT
GCCCCACAAG CTGCTGGTGT TATCCACACT GACTTCGAAC GTGGCTTTAT TCGTGCGCAA
GTAATGGCAT ACGAAGACTT TATTACTTAT AAGGGTGAAG CTGGCGCCAA AGATGCGGGT
AAATTACGTG TTGAAGGTAA AACTTATGTC GTTAAAGATG GCGATGTAAT GCATTTCTTA
TTTAACGTTT AA
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| Protein sequence | MGFKCGIVGL PNVGKSTLFN ALTQAGIEAA NFPFCTIEPN TGVVPVPDAR LDALAAIVKP
QRILPTSMEF VDIAGLVAGA SKGEGLGNKF LANIRETDAI GHVVRCFEDP NIVHVANKID
PAGDIEVINT ELALADLDAC ERAIFRQAKR AKGGDGDAKF EVAVLEKMRP VLNEGQMLRS
LELTKEELAA VAYLNFLTIK PTMYIANVAD DGFENNPHLD VVRAIAATEN AIVVPVCAAI
ESELAEMEAD DRAEFMADLG LEESGLDRVI RAGYELLNLQ TYFTAGVKEV RAWTVPVGAS
APQAAGVIHT DFERGFIRAQ VMAYEDFITY KGEAGAKDAG KLRVEGKTYV VKDGDVMHFL
FNV
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