Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2571 |
Symbol | |
ID | 4174327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3115643 |
End bp | 3116734 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055589 |
Product | GTP-dependent nucleic acid-binding protein EngD |
Protein accession | YP_662141 |
Protein GI | 109898886 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTTTA AATGCGGCAT AGTGGGATTA CCAAACGTAG GTAAATCAAC GCTCTTCAAT GCTTTGACCA AAGCCGGTAT CGAAGCCGCA AACTTTCCGT TTTGTACGAT TGAGCCGAAC ACGGGCGTAG TACCTGTTCC TGATCCTCGT TTAGACAAGC TAGCTGCTAT CGTTAACCCA AAACGTATCT TACCTACCAC GATGGAGTTT GTGGATATAG CGGGATTGGT CGAAGGCGCA TCTAAAGGCG AAGGCCTTGG TAACAAATTC TTAGCAAATA TCCGTGAAAC CGATGCGATT GGTCATGTTG TTCGTTGTTT TGATAACGAC AACATAGTTC ACGTTGCAGG TAAAATTAAC CCCCAAGACG ATATCGATAT TATCAATACT GAATTGGCGC TAGCAGATTT AGAAACCACA GAGAAAGCCC TTTTACGCGT CGCCAAACGT GCCAAAGGTG GTGATGGCGA TGCCAAGTTC GAACTTAAAG TACTTGAGAA AATTAAGCCG CATTTAGACG AAGGCGAGTT GTTGCGCTCC GTTGAGCTTG AAAAAGAAGA ACTAAAAGCC ATTAGCTACA TGAACTTCTT AACGCTTAAG CCAACCATGT ATATTGCCAA CGTGAACGAA GATGGTTTTG AAAATAACCC ATACCTGGAT AAAGTACGCA GCATCGCCGA AGGCGAAAAC GCTGTTGTTG TTGCAGTCTG CGCGGAAATG GAAGCAGAAA TTGGTGAGTT AGAAGACGAC GAACGTGCTG AGTTCATGGC TGAAATGGGC CTTGAAGAAC CAGGGCTAAA CCGTGTTATT CGAAGTGGCT ACAGCCTTCT TAACTTAAAC ACCTACTTTA CTGCTGGTGT ACAAGAAGTG CGCGCATGGA CTTTCCCAAT TGGTTCTACC GCGCCGCAAA CGGCTGGTAT CATTCATACC GATTTTGAGA AAGGCTTTAT TCGCGCCGAA GTCATTGGTT ACGACAACTT TGTTGAATTC AATGGTGAGC AAGGTGCCAA AGACGCAGGT AAATGGCGCT TAGAAGGTAA AGAATACATT GTTAAAGACG GCGATGTTAT CCACTTCCGT TTCAACGTAT AG
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Protein sequence | MGFKCGIVGL PNVGKSTLFN ALTKAGIEAA NFPFCTIEPN TGVVPVPDPR LDKLAAIVNP KRILPTTMEF VDIAGLVEGA SKGEGLGNKF LANIRETDAI GHVVRCFDND NIVHVAGKIN PQDDIDIINT ELALADLETT EKALLRVAKR AKGGDGDAKF ELKVLEKIKP HLDEGELLRS VELEKEELKA ISYMNFLTLK PTMYIANVNE DGFENNPYLD KVRSIAEGEN AVVVAVCAEM EAEIGELEDD ERAEFMAEMG LEEPGLNRVI RSGYSLLNLN TYFTAGVQEV RAWTFPIGST APQTAGIIHT DFEKGFIRAE VIGYDNFVEF NGEQGAKDAG KWRLEGKEYI VKDGDVIHFR FNV
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