Gene Sros_8476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8476 
Symbol 
ID8671810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9357284 
End bp9358372 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content69% 
IMG OID 
ProductGTP-binding protein YchF 
Protein accessionYP_003343863 
Protein GI271969667 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.775953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTGA GCATCGGCAT CGTCGGATTG CCCAACGTCG GCAAGTCAAC GCTTTTCAAC 
GCGCTGACGA AGACCGCCAA CGCCCTGGCG GCGAACTATC CGTTCGCCAC CATCGAGCCC
AACGTGGGCA TCGTCGGCGT TCCCGACCCG CGTCTGGAGA AGCTGGCCGA GATCTTCGGT
TCCGCGAAGA TCCTGCCCGC GAAGGTCGAG TTCGTCGACA TCGCCGGACT GGTCCGCGGC
GCCTCGGAGG GGCAGGGGCG GGGTAACCAG TTCCTCGCCA ACATCCGCGA GACCGACGCC
ATCTGCCAGG TCATCCGGGT CTTCAACGAC CCCGACGTGA CCCACGTGGA CGGCGGAGTC
GCCCCCGAGC GCGACATCGA GACGATCAAC ACCGAGCTGA TCCTCGCCGA CCTGCAGACC
CTGGAGAAGG CGATCCCCCG CCTCCAGAAG GAGTCCAGGA CCAACAAGGA CCGCAGGTCC
ACGCTGGAGG CGGCCGAGGC CGCGGTCAAG CTCCTCGACG GCGGCACCAC CCTGTACGCC
GGAGCGAAGG GGGCCGGGAT CGATGTGGCC GACCTCCGCG AGCTGCACCT GCTGACCGCC
AAGCCGTTCC TCTACGCGTT CAACCTCGAC GCCGACGAGC TGACGGACGA GGACCTGCGG
GCCCGGCTGG CGGCGATCGT CGCGCCCGCC GAGGCCGTCT TCCTGGACGC CAAGATCGAG
TCCGAGCTCG TCGAGCTCCC CGACGACGAG GCCCTGGAGC TGCTGCAGTC CGTCGGCCAG
GAGGAGTCCG GCCTGTCGCA GCTCGCCCGG GTCGGGTTCG AGACCCTCGG CCTGCAGACC
TACCTGACCG CCGGCCCCAA GGAGACCCGG GCCTGGACGA TCCGCAAGAA CGCCACGGCT
CCCGAGGCGG CCGGGGTCAT CCACACCGAC TTCCAGCGCG GTTTCATCAA GGCGGAGATC
GTCTCCTTCG ACGAGCTGGT GGAGGTGGGC TCCATCGCCG CCGCCCGCCA GGCGGGCAAG
GCCCGGATCG AGGGCAAGGA CTACGTGATG CGCGACGGCG ACGTCGTGGA GTTCCGCTTC
AACGTCTGA
 
Protein sequence
MSLSIGIVGL PNVGKSTLFN ALTKTANALA ANYPFATIEP NVGIVGVPDP RLEKLAEIFG 
SAKILPAKVE FVDIAGLVRG ASEGQGRGNQ FLANIRETDA ICQVIRVFND PDVTHVDGGV
APERDIETIN TELILADLQT LEKAIPRLQK ESRTNKDRRS TLEAAEAAVK LLDGGTTLYA
GAKGAGIDVA DLRELHLLTA KPFLYAFNLD ADELTDEDLR ARLAAIVAPA EAVFLDAKIE
SELVELPDDE ALELLQSVGQ EESGLSQLAR VGFETLGLQT YLTAGPKETR AWTIRKNATA
PEAAGVIHTD FQRGFIKAEI VSFDELVEVG SIAAARQAGK ARIEGKDYVM RDGDVVEFRF
NV