Gene Acel_1861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1861 
Symbol 
ID4486659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2104301 
End bp2105422 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content64% 
IMG OID639730651 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_873619 
Protein GI117929068 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.924801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCCGC GACCGTTAGG CTCACCTGTT GTGGCTCTGT CGATCGGAAT TGTCGGTCTG 
CCGAACGTCG GGAAATCGAC CCTGTTCAAC GCGCTGACGA AGAACGACGT CCTGGCGGCG
AACTACCCGT TCGCGACGAT CGATCCAAAC GTCGGCGTGG TCGGCGTCCC CGATCCTCGG
CTCGACGTCC TCGCTCGAAT GTTCGGTTCC GCGCGGATCG TCCCGGCAAC GGTGACGTTC
GTCGACATCG CGGGTCTGGT GCGCGGGGCA TCGCAAGGGC AAGGACTCGG CAACAAGTTT
CTCGCCCACA TCCGGGAAAC CGACGCGATT TGCCAAGTCG TCCGGGTCTT CACCGATTCC
GATGTCGCGC ACGTCGCGGG CCGTGTCGAC CCCGCCGACG ACATTGAGGT CGTCAACACC
GAGCTGGTGC TCGCCGACCT GCAGACCCTG GAGAAAGTTT TGCCCCGCCT GGAGAAAGAG
GTGCGACTGG GCGGCACGGG ACCCGCGGCG AAAGCGCGGG CAGAGGCCCT GGACGCGGCC
CGGGCGGCGT ACGAGGTCCT GAATTCCGGC AAGACGGTCT TCTCCGCGGG GATTGACACG
ACCGCGCTGC GCGACGTGCA CCTGTTGACC GCAAAACCGT TTCTGTACGT TTTCAACGTC
GACGAAACCG AAATCACCAA CGACCGCCTG AAAGCACGGT TACAGGAATT GGTCGCCCCC
GCGCCCGCAA TTTTTCTCGA TGCGAAATTG GAAGCCGAAC TTGCCGATCT CAGCGAAGAA
GACGCCCGCG AACTGCTCGC GTCGATCGGC CAGCGGGAAT CCGGCTTGGC CATCCTTGCG
CGGACCGGTT TCGACGTCCT CGGCTTGCAG ACCTTCTTGA CCGCAGGGCC AAAGGAAACC
CGGGCATGGA CGATCCGCAA GGGGGCGACC GCCCCCGAAG CCGCGGGAGT CATCCACTCG
GATTTTCAGC GCGGCTTCAT CAAGGCGGAG GTGGTCAGTT ACGACGACCT GGTCGCCGCC
GGTTCACTCG CGCAGGCACG GGCGCAAGGA AAGGTGCGGA TCGAGGGCCG GGATTACGTC
ATGCAGGACG GCGACGTCGT CGAATTTCGA TTCAACGTGT GA
 
Protein sequence
MRPRPLGSPV VALSIGIVGL PNVGKSTLFN ALTKNDVLAA NYPFATIDPN VGVVGVPDPR 
LDVLARMFGS ARIVPATVTF VDIAGLVRGA SQGQGLGNKF LAHIRETDAI CQVVRVFTDS
DVAHVAGRVD PADDIEVVNT ELVLADLQTL EKVLPRLEKE VRLGGTGPAA KARAEALDAA
RAAYEVLNSG KTVFSAGIDT TALRDVHLLT AKPFLYVFNV DETEITNDRL KARLQELVAP
APAIFLDAKL EAELADLSEE DARELLASIG QRESGLAILA RTGFDVLGLQ TFLTAGPKET
RAWTIRKGAT APEAAGVIHS DFQRGFIKAE VVSYDDLVAA GSLAQARAQG KVRIEGRDYV
MQDGDVVEFR FNV